RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 PTPROQ16827 1216 aa20.42■□□□□ 0.86
SMPD1-210ENST00000534405 MFSD5Q6N075 450 aa20.42■□□□□ 0.86
SMPD1-210ENST00000534405 RINT1Q6NUQ1 792 aa20.42■□□□□ 0.86
SMPD1-210ENST00000534405 METTL13Q8N6R0 699 aa20.42■□□□□ 0.86
SMPD1-210ENST00000534405 ZBTB8BQ8NAP8 495 aaPredicted RBP20.42■□□□□ 0.86
SMPD1-210ENST00000534405 MYLK2Q9H1R3 596 aa20.42■□□□□ 0.86
SMPD1-210ENST00000534405 NAGPAQ9UK23 515 aa20.42■□□□□ 0.86
SMPD1-210ENST00000534405 ZMYM2Q9UBW7 1377 aa20.42■□□□□ 0.86
SMPD1-210ENST00000534405 NPM3O75607 178 aaKnown RBP20.42■□□□□ 0.86
SMPD1-210ENST00000534405 ZNF76P36508 570 aa20.42■□□□□ 0.86
SMPD1-210ENST00000534405 FKBP1AP62942 108 aaKnown RBP20.42■□□□□ 0.86
SMPD1-210ENST00000534405 AUHQ13825 339 aaKnown RBP20.42■□□□□ 0.86
SMPD1-210ENST00000534405 AKT1S1Q96B36 256 aa20.42■□□□□ 0.86
SMPD1-210ENST00000534405 PRDM16Q9HAZ2 1276 aa20.42■□□□□ 0.86
SMPD1-210ENST00000534405 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.42■□□□□ 0.86
SMPD1-210ENST00000534405 SERPINA10Q9UK55 444 aa20.42■□□□□ 0.86
SMPD1-210ENST00000534405 INTUQ9ULD6 942 aa20.42■□□□□ 0.86
SMPD1-210ENST00000534405 PCDHB13Q9Y5F0 798 aa20.42■□□□□ 0.86
SMPD1-210ENST00000534405 KIF13BQ9NQT8 1826 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 HNRNPRO43390 633 aaKnown RBP20.41■□□□□ 0.86
SMPD1-210ENST00000534405 TBCAO75347 108 aaKnown RBP20.41■□□□□ 0.86
SMPD1-210ENST00000534405 ASLP04424 464 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 CYP3A4P08684 503 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 SPATA31D3P0C874 917 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 NMT1P30419 496 aaKnown RBP20.41■□□□□ 0.86
SMPD1-210ENST00000534405 CBX3Q13185 183 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 LIN52Q52LA3 116 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 DUPD1Q68J44 220 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 SPATA31D4Q6ZUB0 917 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 GRAMD1AQ96CP6 724 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 SLC7A6OSQ96CW6 309 aaPredicted RBP20.41■□□□□ 0.86
SMPD1-210ENST00000534405 PRMT6Q96LA8 375 aaPredicted RBP20.41■□□□□ 0.86
SMPD1-210ENST00000534405 HSD17B14Q9BPX1 270 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 HSFX1Q9UBD0 423 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 TBC1D30Q9Y2I9 924 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 VIL1P09327 827 aaKnown RBP20.41■□□□□ 0.86
SMPD1-210ENST00000534405 SULT2A1Q06520 285 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 RBM26Q5T8P6 1007 aaKnown RBP20.41■□□□□ 0.86
SMPD1-210ENST00000534405 INTS8Q75QN2 995 aaKnown RBP20.41■□□□□ 0.86
SMPD1-210ENST00000534405 KSR1Q8IVT5 923 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 LRRC57Q8N9N7 239 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 EPS8L3Q8TE67 593 aaKnown RBP20.41■□□□□ 0.86
SMPD1-210ENST00000534405 NRG4Q8WWG1 115 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 TRIM51Q9BSJ1 452 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 RANBP17Q9H2T7 1088 aaKnown RBP20.41■□□□□ 0.86
SMPD1-210ENST00000534405 TUBGCP4Q9UGJ1 667 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 NENFQ9UMX5 172 aa20.41■□□□□ 0.86
SMPD1-210ENST00000534405 SLX4Q8IY92 1834 aa20.4■□□□□ 0.86
SMPD1-210ENST00000534405 TRAFD1O14545 582 aaPredicted RBP20.4■□□□□ 0.86
SMPD1-210ENST00000534405 CHMP2AO43633 222 aa20.4■□□□□ 0.86
SMPD1-210ENST00000534405 SLITRK3O94933 977 aa20.4■□□□□ 0.86
SMPD1-210ENST00000534405 JAM2P57087 298 aa20.4■□□□□ 0.86
SMPD1-210ENST00000534405 ALKBH5Q6P6C2 394 aaKnown RBP20.4■□□□□ 0.86
SMPD1-210ENST00000534405 OTOP1Q7RTM1 612 aa20.4■□□□□ 0.86
SMPD1-210ENST00000534405 VSIG1Q86XK7 387 aa20.4■□□□□ 0.86
SMPD1-210ENST00000534405 DDX27Q96GQ7 796 aaKnown RBP20.4■□□□□ 0.86
SMPD1-210ENST00000534405 CENPKQ9BS16 269 aa20.4■□□□□ 0.86
SMPD1-210ENST00000534405 GCNT4Q9P109 453 aa20.4■□□□□ 0.86
SMPD1-210ENST00000534405 ATRNL1Q5VV63 1379 aa20.4■□□□□ 0.86
SMPD1-210ENST00000534405 PIK3CDO00329 1044 aa20.39■□□□□ 0.86
SMPD1-210ENST00000534405 PRKCIP41743 596 aa20.39■□□□□ 0.86
SMPD1-210ENST00000534405 UBXN2AP68543 259 aa20.39■□□□□ 0.86
SMPD1-210ENST00000534405 MTFR1Q15390 333 aa20.39■□□□□ 0.86
SMPD1-210ENST00000534405 CCDC6Q16204 474 aa20.39■□□□□ 0.86
SMPD1-210ENST00000534405 AOC3Q16853 763 aa20.39■□□□□ 0.86
SMPD1-210ENST00000534405 KCTD19Q17RG1 926 aaPredicted RBP20.39■□□□□ 0.86
SMPD1-210ENST00000534405 LENG1Q96BZ8 264 aaPredicted RBP20.39■□□□□ 0.86
SMPD1-210ENST00000534405 DYDC2Q96IM9 177 aa20.39■□□□□ 0.86
SMPD1-210ENST00000534405 CCDC113Q9H0I3 377 aa20.39■□□□□ 0.86
SMPD1-210ENST00000534405 TLE6Q9H808 572 aa20.39■□□□□ 0.86
SMPD1-210ENST00000534405 OLFML3Q9NRN5 406 aa20.39■□□□□ 0.86
SMPD1-210ENST00000534405 HAO1Q9UJM8 370 aa20.39■□□□□ 0.86
SMPD1-210ENST00000534405 SLC16A3O15427 465 aaKnown RBP20.39■□□□□ 0.85
SMPD1-210ENST00000534405 CFBP00751 764 aa20.39■□□□□ 0.85
SMPD1-210ENST00000534405 LYNP07948 512 aa20.39■□□□□ 0.85
SMPD1-210ENST00000534405 TARSP26639 723 aaKnown RBP20.39■□□□□ 0.85
SMPD1-210ENST00000534405 EPHB2P29323 1055 aa20.39■□□□□ 0.85
SMPD1-210ENST00000534405 COG2Q14746 738 aa20.39■□□□□ 0.85
SMPD1-210ENST00000534405 TPH2Q8IWU9 490 aa20.39■□□□□ 0.85
SMPD1-210ENST00000534405 MGARPQ8TDB4 240 aa20.39■□□□□ 0.85
SMPD1-210ENST00000534405 ACER1Q8TDN7 264 aa20.39■□□□□ 0.85
SMPD1-210ENST00000534405 CSRNP1Q96S65 589 aa20.39■□□□□ 0.85
SMPD1-210ENST00000534405 TSPAN18Q96SJ8 248 aa20.39■□□□□ 0.85
SMPD1-210ENST00000534405 TSPYL2Q9H2G4 693 aaPredicted RBP20.39■□□□□ 0.85
SMPD1-210ENST00000534405 PCDH18Q9HCL0 1135 aa20.39■□□□□ 0.85
SMPD1-210ENST00000534405 DDX43Q9NXZ2 648 aaKnown RBP20.39■□□□□ 0.85
SMPD1-210ENST00000534405 RPTORQ8N122 1335 aa20.39■□□□□ 0.85
SMPD1-210ENST00000534405 RASGRF2O14827 1237 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 HGSO14964 777 aaPredicted RBP20.38■□□□□ 0.85
SMPD1-210ENST00000534405 E2F6O75461 281 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 ITGA2BP08514 1039 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 POLGP54098 1239 aaPredicted RBP20.38■□□□□ 0.85
SMPD1-210ENST00000534405 TMED1Q13445 227 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 DAB2IPQ5VWQ8 1189 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 C1orf186Q6ZWK4 172 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 OLIG1Q8TAK6 271 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 TRIM31Q9BZY9 425 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 METTL14Q9HCE5 456 aaKnown RBP20.38■□□□□ 0.85
SMPD1-210ENST00000534405 ETNK2Q9NVF9 386 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 WRAP73Q9P2S5 460 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms