RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 ADKP55263 362 aaKnown RBP5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 CDC42EP1Q00587 391 aa5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 EXOSC10Q01780 885 aaKnown RBP5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 UBXN2BQ14CS0 331 aa5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 C3orf36Q3SXR2 165 aa5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 PDCD4Q53EL6 469 aaKnown RBP5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 AGAP9Q5VTM2 703 aa5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 ZNF529Q6P280 563 aa5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 MED25Q71SY5 747 aa5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 PLXDC1Q8IUK5 500 aa5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 RAB24Q969Q5 203 aa5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 SORCS2Q96PQ0 1159 aa5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 AKIP1Q9NQ31 210 aa5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 TDP1Q9NUW8 608 aa5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 FBXO34Q9NWN3 711 aa5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 ING1Q9UK53 422 aaPredicted RBP5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 USP15Q9Y4E8 981 aaPredicted RBP5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 SGTAO43765 313 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 PPFIA4O75335 1185 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 NCR1O76036 304 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 ITGB1P05556 798 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 SPATA31D3P0C874 917 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 LAG3P18627 525 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 RECQLP46063 649 aaPredicted RBP5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 CTXN1P60606 82 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 IGBP1P78318 339 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 IL10RAQ13651 578 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 UAP1L1Q3KQV9 507 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 DACT2Q5SW24 774 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 LRRC55Q6ZSA7 311 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 SPATA31D4Q6ZUB0 917 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 UBE3BQ7Z3V4 1068 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 RSPH3Q86UC2 560 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 RHOT2Q8IXI1 618 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 SYNE4Q8N205 404 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 STAG1Q8WVM7 1258 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 NEU4Q8WWR8 484 aaPredicted RBP5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 LARP4BQ92615 738 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 CHMP4CQ96CF2 233 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 MYEOVQ96EZ4 313 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 TMX3Q96JJ7 454 aa5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 TYW1Q9NV66 732 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-211ENST00000534216 SNUPNO95149 360 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 NCLP19338 710 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 SLC6A2P23975 617 aa5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 FHL2Q14192 279 aa5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 TIGD2Q4W5G0 525 aa5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 TMEM240Q5SV17 173 aa5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 ZNF627Q7L945 461 aa5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 ZBTB46Q86UZ6 589 aa5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 CMTR2Q8IYT2 770 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 AMER2Q8N7J2 671 aa5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 DCBLD1Q8N8Z6 715 aa5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 OR56A1Q8NGH5 318 aa5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 IFI44Q8TCB0 444 aa5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 KAT5Q92993 513 aa5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 MLST8Q9BVC4 326 aa5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 C11orf54Q9H0W9 315 aaPredicted RBP5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 KLHL11Q9NVR0 708 aa5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 DDX56Q9NY93 547 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 ATP11BQ9Y2G3 1177 aa5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 PCDHB1Q9Y5F3 818 aa5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 HS3ST4Q9Y661 456 aa5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 FPGT-TNNI3KV9GXZ4 949 aa5.24□□□□□ -1.57
ATPAF1-211ENST00000534216 TTBK1Q5TCY1 1321 aaPredicted RBP5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 CENPVL1A0A0U1RR11 272 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 TCRBV7S2A1N4TA0A589 114 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 TMEM200CA6NKL6 621 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 NDUFA10O95299 355 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 ABHD16AO95870 558 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 ALAS1P13196 640 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 NEK2P51955 445 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 CREMQ03060 361 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 RAB39AQ14964 217 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 ATP2B3Q16720 1220 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 BEAN1Q3B7T3 259 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 TSHZ3Q63HK5 1081 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 PPP4R3AQ6IN85 833 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 ULK2Q8IYT8 1036 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 MIER2Q8N344 545 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 PROKR1Q8TCW9 393 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 MRGPRX4Q96LA9 322 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 DMRTA2Q96SC8 542 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 REXO4Q9GZR2 422 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 DKK2Q9UBU2 259 aa5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 LUC7L2Q9Y383 392 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 CFAP20Q9Y6A4 193 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-211ENST00000534216 MARCH11A6NNE9 402 aa5.22□□□□□ -1.57
ATPAF1-211ENST00000534216 KIAA0391O15091 583 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-211ENST00000534216 LPXNO60711 386 aa5.22□□□□□ -1.57
ATPAF1-211ENST00000534216 PRSS23O95084 383 aa5.22□□□□□ -1.57
ATPAF1-211ENST00000534216 HLA-DOAP06340 250 aa5.22□□□□□ -1.57
ATPAF1-211ENST00000534216 PDGFRBP09619 1106 aa5.22□□□□□ -1.57
ATPAF1-211ENST00000534216 GCSHP23434 173 aa5.22□□□□□ -1.57
ATPAF1-211ENST00000534216 BMPR1AP36894 532 aa5.22□□□□□ -1.57
ATPAF1-211ENST00000534216 LY6G5CQ5SRR4 150 aa5.22□□□□□ -1.57
ATPAF1-211ENST00000534216 KCNV1Q6PIU1 500 aa5.22□□□□□ -1.57
ATPAF1-211ENST00000534216 Q6ZPA2 131 aa5.22□□□□□ -1.57
ATPAF1-211ENST00000534216 CPA6Q8N4T0 437 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms