RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 LRPAP1P30533 357 aa11.84□□□□□ -0.51
SDHD-208ENST00000534010 AARSP49588 968 aaKnown RBP eCLIP11.84□□□□□ -0.51
SDHD-208ENST00000534010 CLCNKBP51801 687 aa11.84□□□□□ -0.51
SDHD-208ENST00000534010 ZXDAP98168 799 aa11.84□□□□□ -0.51
SDHD-208ENST00000534010 POU5F1Q01860 360 aaKnown RBP11.84□□□□□ -0.51
SDHD-208ENST00000534010 CREMQ03060 361 aa11.84□□□□□ -0.51
SDHD-208ENST00000534010 ELAVL2Q12926 359 aaKnown RBP11.84□□□□□ -0.51
SDHD-208ENST00000534010 GLRA4Q5JXX5 417 aa11.84□□□□□ -0.51
SDHD-208ENST00000534010 SPECC1Q5M775 1068 aa11.84□□□□□ -0.51
SDHD-208ENST00000534010 AXDND1Q5T1B0 1012 aaPredicted RBP11.84□□□□□ -0.51
SDHD-208ENST00000534010 CNNM4Q6P4Q7 775 aa11.84□□□□□ -0.51
SDHD-208ENST00000534010 DCLRE1AQ6PJP8 1040 aa11.84□□□□□ -0.51
SDHD-208ENST00000534010 RSPO2Q6UXX9 243 aaPredicted RBP11.84□□□□□ -0.51
SDHD-208ENST00000534010 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.84□□□□□ -0.51
SDHD-208ENST00000534010 APBB1IPQ7Z5R6 666 aaPredicted RBP11.84□□□□□ -0.51
SDHD-208ENST00000534010 CDK5RAP3Q96JB5 506 aa11.84□□□□□ -0.51
SDHD-208ENST00000534010 TTPALQ9BTX7 342 aa11.84□□□□□ -0.51
SDHD-208ENST00000534010 PLEKHA5Q9HAU0 1116 aa11.84□□□□□ -0.51
SDHD-208ENST00000534010 GOLGA2P5Q9HBQ8 144 aa11.84□□□□□ -0.51
SDHD-208ENST00000534010 TOPORSQ9NS56 1045 aaPredicted RBP11.84□□□□□ -0.51
SDHD-208ENST00000534010 MTRRQ9UBK8 725 aa11.84□□□□□ -0.51
SDHD-208ENST00000534010 FBXW11Q9UKB1 542 aa11.84□□□□□ -0.51
SDHD-208ENST00000534010 TBX20Q9UMR3 447 aa11.84□□□□□ -0.51
SDHD-208ENST00000534010 MYMKA6NI61 221 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 ADAM12O43184 909 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 TRAK2O60296 914 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 TADA2AO75478 443 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 GLUD1P00367 558 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 SSBP05455 408 aaKnown RBP eCLIP11.83□□□□□ -0.52
SDHD-208ENST00000534010 KLRC2P26717 231 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 HOXA9P31269 272 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 ABCD1P33897 745 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 RAB33AQ14088 237 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 ZRSR1Q15695 479 aaKnown RBP11.83□□□□□ -0.52
SDHD-208ENST00000534010 PTPN21Q16825 1174 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 RARS2Q5T160 578 aaKnown RBP11.83□□□□□ -0.52
SDHD-208ENST00000534010 CES5AQ6NT32 575 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 PRSS55Q6UWB4 352 aaPredicted RBP11.83□□□□□ -0.52
SDHD-208ENST00000534010 ZNF720Q7Z2F6 126 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 KRI1Q8N9T8 703 aaKnown RBP11.83□□□□□ -0.52
SDHD-208ENST00000534010 RIN2Q8WYP3 895 aaPredicted RBP11.83□□□□□ -0.52
SDHD-208ENST00000534010 DDX27Q96GQ7 796 aaKnown RBP11.83□□□□□ -0.52
SDHD-208ENST00000534010 RIPOR3Q96MK2 946 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 ACAP3Q96P50 834 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 TSPAN18Q96SJ8 248 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 CCDC94Q9BW85 323 aaPredicted RBP11.83□□□□□ -0.52
SDHD-208ENST00000534010 MAN1C1Q9NR34 630 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 OLFML3Q9NRN5 406 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 ZDHHC7Q9NXF8 308 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 BACE2Q9Y5Z0 518 aa11.83□□□□□ -0.52
SDHD-208ENST00000534010 FAM86C2PA6NEL3 165 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 C2CD2LO14523 706 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 CLDN3O15551 220 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 RFPL2O75678 378 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 YEATS4O95619 227 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 CLTAP09496 248 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 WEE2P0C1S8 567 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 LIG1P18858 919 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 CYP3A5P20815 502 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 ADSSP30520 456 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 RPL9P32969 192 aaKnown RBP11.82□□□□□ -0.52
SDHD-208ENST00000534010 ENOX2Q16206 610 aaKnown RBP11.82□□□□□ -0.52
SDHD-208ENST00000534010 ATAT1Q5SQI0 421 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 ZBTB41Q5SVQ8 909 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 FAM171A1Q5VUB5 890 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 SLC8B1Q6J4K2 584 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 TMC5Q6UXY8 1006 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 TRIM67Q6ZTA4 783 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 RTL10Q7L3V2 364 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 DDX12PQ92771 950 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 C18orf25Q96B23 403 aaPredicted RBP11.82□□□□□ -0.52
SDHD-208ENST00000534010 HVCN1Q96D96 273 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 RPGRIP1Q96KN7 1286 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 APOL5Q9BWW9 433 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 WDR6Q9NNW5 1121 aaKnown RBP11.82□□□□□ -0.52
SDHD-208ENST00000534010 SLC38A7Q9NVC3 462 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 KBTBD4Q9NVX7 518 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 SEL1LQ9UBV2 794 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 DPP7Q9UHL4 492 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 RAPGEFL1Q9UHV5 662 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 CPSF3Q9UKF6 684 aaKnown RBP11.82□□□□□ -0.52
SDHD-208ENST00000534010 NR2E1Q9Y466 385 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 GTF3C3Q9Y5Q9 886 aa11.82□□□□□ -0.52
SDHD-208ENST00000534010 ANKRD63C9JTQ0 380 aa11.81□□□□□ -0.52
SDHD-208ENST00000534010 M0QZQ0 153 aa11.81□□□□□ -0.52
SDHD-208ENST00000534010 SYN3O14994 580 aa11.81□□□□□ -0.52
SDHD-208ENST00000534010 OGTO15294 1046 aa11.81□□□□□ -0.52
SDHD-208ENST00000534010 ZMYND10O75800 440 aa11.81□□□□□ -0.52
SDHD-208ENST00000534010 B3GAT3O94766 335 aa11.81□□□□□ -0.52
SDHD-208ENST00000534010 ABLIM3O94929 683 aa11.81□□□□□ -0.52
SDHD-208ENST00000534010 RPL17P18621 184 aaKnown RBP11.81□□□□□ -0.52
SDHD-208ENST00000534010 TKTP29401 623 aaKnown RBP11.81□□□□□ -0.52
SDHD-208ENST00000534010 NMT1P30419 496 aaKnown RBP11.81□□□□□ -0.52
SDHD-208ENST00000534010 TNFSF9P41273 254 aa11.81□□□□□ -0.52
SDHD-208ENST00000534010 YARSP54577 528 aaKnown RBP11.81□□□□□ -0.52
SDHD-208ENST00000534010 EHHADHQ08426 723 aa11.81□□□□□ -0.52
SDHD-208ENST00000534010 STRN3Q13033 797 aa11.81□□□□□ -0.52
SDHD-208ENST00000534010 PKP1Q13835 747 aa11.81□□□□□ -0.52
SDHD-208ENST00000534010 PSMD5Q16401 504 aa11.81□□□□□ -0.52
SDHD-208ENST00000534010 KYAT1Q16773 422 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms