RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 SRGAP2BP0DMP2 458 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 ADORA1P30542 326 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 MAGEA4P43358 317 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 CACNA2D1P54289 1103 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 CDK16Q00536 496 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 SLC29A2Q14542 456 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 PLS1Q14651 629 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 DDB1Q16531 1140 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.28□□□□□ -1.72
SOX6-217ENST00000533870 LIN52Q52LA3 116 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 MIGA2Q7L4E1 593 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 POLNQ7Z5Q5 900 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 NT5DC3Q86UY8 548 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 ZBTB8OSQ8IWT0 167 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 PNPT1Q8TCS8 783 aaKnown RBP4.28□□□□□ -1.72
SOX6-217ENST00000533870 GIPC2Q8TF65 315 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 ART4Q93070 314 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 ACSBG1Q96GR2 724 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 C7orf26Q96N11 449 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 SAYSD1Q9NPB0 183 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 PTBP2Q9UKA9 531 aaKnown RBP4.28□□□□□ -1.72
SOX6-217ENST00000533870 CPS1P31327 1500 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 NBPF26B4DH59 902 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 H0YJX3 145 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 GOLGA8TH3BQL2 631 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 KRT1P04264 644 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 GOLGA8HP0CJ92 632 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 THRAP10827 490 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 CD44P16070 742 aaKnown RBP4.28□□□□□ -1.72
SOX6-217ENST00000533870 PURAQ00577 322 aaKnown RBP4.28□□□□□ -1.72
SOX6-217ENST00000533870 DSG1Q02413 1049 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 RRP1BQ14684 758 aaKnown RBP4.28□□□□□ -1.72
SOX6-217ENST00000533870 BBS9Q3SYG4 887 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 CWF19L1Q69YN2 538 aaKnown RBP4.28□□□□□ -1.72
SOX6-217ENST00000533870 RNF207Q6ZRF8 634 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 TMEM179Q6ZVK1 233 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 RIOK1Q9BRS2 568 aaKnown RBP4.28□□□□□ -1.72
SOX6-217ENST00000533870 EHD4Q9H223 541 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 PLGRKTQ9HBL7 147 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 PALMDQ9NP74 551 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 ANKEF1Q9NU02 776 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 LRRC42Q9Y546 428 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 MAD1L1Q9Y6D9 718 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 DISP2A7MBM2 1401 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 CDC42BPAQ5VT25 1732 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 ARHGEF37A1IGU5 675 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 MYBP10242 640 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 ATP4AP20648 1035 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 GFPT1Q06210 699 aaPredicted RBP4.28□□□□□ -1.72
SOX6-217ENST00000533870 NDUFA5Q16718 116 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 GRAMD1BQ3KR37 738 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 BRDTQ58F21 947 aaPredicted RBP4.28□□□□□ -1.72
SOX6-217ENST00000533870 EFHC1Q5JVL4 640 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 GRAMD4Q6IC98 578 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 RWDD4Q6NW29 188 aaKnown RBP4.28□□□□□ -1.72
SOX6-217ENST00000533870 FAM9CQ8IZT9 166 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 PDPRQ8NCN5 879 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 BTBD10Q9BSF8 475 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 TSSK1BQ9BXA7 367 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 OSBPL7Q9BZF2 842 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 DIABLOQ9NR28 239 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 AGTPBP1Q9UPW5 1226 aa4.28□□□□□ -1.72
SOX6-217ENST00000533870 DIP2AQ14689 1571 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 MROH7Q68CQ1 1323 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 A0A087WXM4 84 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 ERI2A8K979 691 aaKnown RBP4.27□□□□□ -1.73
SOX6-217ENST00000533870 RIPK2O43353 540 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 STAM2O75886 525 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 ALOX5P09917 674 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 KRT3P12035 628 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 CDH2P19022 906 aaPredicted RBP4.27□□□□□ -1.73
SOX6-217ENST00000533870 SLC12A2P55011 1212 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 RTP1P59025 263 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 TUBA4AP68366 448 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 ATP2B2Q01814 1243 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 C1QBPQ07021 282 aaKnown RBP4.27□□□□□ -1.73
SOX6-217ENST00000533870 TMEM154Q6P9G4 183 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 FAM47EQ6ZV65 393 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 PPIL6Q8IXY8 311 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 KAT2BQ92831 832 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 PIGSQ96S52 555 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 VAT1LQ9HCJ6 419 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 NRBP2Q9NSY0 501 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 COPG2Q9UBF2 871 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 CLUHO75153 1309 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 TCP11X1B4DZS4 312 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 ANKRD65E5RJM6 399 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 CYTH3O43739 400 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 GLRA3O75311 464 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 E2F6O75461 281 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 PLEKHA8P1O95397 391 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 ATF7P17544 494 aaPredicted RBP4.27□□□□□ -1.73
SOX6-217ENST00000533870 GARTP22102 1010 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 PRDX6P30041 224 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 PSEN1P49768 467 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 GEMIN4P57678 1058 aaKnown RBP4.27□□□□□ -1.73
SOX6-217ENST00000533870 FUT2Q10981 343 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 HIF1AQ16665 826 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 P3H1Q32P28 736 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 ITPRIPL1Q6GPH6 555 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms