RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 GALCP54803 685 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 ACTR2P61160 394 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 CLDN10P78369 228 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 FAM102BQ5T8I3 360 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 KRT39Q6A163 491 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 PHLDB3Q6NSJ2 640 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 KCNV1Q6PIU1 500 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 IFT20Q8IY31 132 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 EXOC8Q8IYI6 725 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 ANKRD13CQ8N6S4 541 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 PARD3BQ8TEW8 1205 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 CTNNBL1Q8WYA6 563 aaPredicted RBP10.42□□□□□ -0.74
CHKA-207ENST00000533728 CAVIN3Q969G5 261 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 CEP170P1Q96L14 293 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 CBWD1Q9BRT8 395 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 PACSIN1Q9BY11 444 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 ISCUQ9H1K1 167 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 POLD4Q9HCU8 107 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 MCM3APO60318 1980 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 PLXNA3P51805 1871 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 ZNF236Q9UL36 1845 aa10.42□□□□□ -0.74
CHKA-207ENST00000533728 DENND3A2RUS2 1198 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 BHMG1C9JSJ3 638 aaPredicted RBP10.41□□□□□ -0.74
CHKA-207ENST00000533728 PDHXO00330 501 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 GAS2O43903 313 aaKnown RBP10.41□□□□□ -0.74
CHKA-207ENST00000533728 SLC25A27O95847 323 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 ADRB2P07550 413 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 MFAP3P55082 362 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 PRKCEQ02156 737 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 PPP3CAQ08209 521 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 C2orf54Q08AI8 447 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 NEDD9Q14511 834 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 SNRNP35Q16560 246 aaKnown RBP10.41□□□□□ -0.74
CHKA-207ENST00000533728 ST3GAL2Q16842 350 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 HSP90B2PQ58FF3 399 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 SLFN12LQ6IEE8 588 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 C8orf74Q6P047 294 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 HFE2Q6ZVN8 426 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 PEX26Q7Z412 305 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 FAM71AQ8IYT1 594 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 GPD1LQ8N335 351 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 AFAP1L1Q8TED9 768 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 SCFD2Q8WU76 684 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 SHC3Q92529 594 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 EXOC4Q96A65 974 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 HES6Q96HZ4 224 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 AGPAT1Q99943 283 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 TMEM117Q9H0C3 514 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 DHX33Q9H6R0 707 aaKnown RBP10.41□□□□□ -0.74
CHKA-207ENST00000533728 TMEM134Q9H6X4 195 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 XPNPEP1Q9NQW7 623 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 PRDM5Q9NQX1 630 aaPredicted RBP10.41□□□□□ -0.74
CHKA-207ENST00000533728 GDF3Q9NR23 364 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 FAM86C1Q9NVL1 165 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 AMFRQ9UKV5 643 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 COG5Q9UP83 839 aa10.41□□□□□ -0.74
CHKA-207ENST00000533728 CCDC169A6NNP5 214 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 MIF4GDA9UHW6 222 aaKnown RBP10.4□□□□□ -0.74
CHKA-207ENST00000533728 NCK2O43639 380 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 RTN2O75298 545 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 LDHAP00338 332 aaKnown RBP10.4□□□□□ -0.74
CHKA-207ENST00000533728 OATP04181 439 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 ADSSP30520 456 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 ARL2P36404 184 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 NAMPTP43490 491 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 NOP2P46087 812 aaKnown RBP10.4□□□□□ -0.74
CHKA-207ENST00000533728 ALDH5A1P51649 535 aaPredicted RBP10.4□□□□□ -0.74
CHKA-207ENST00000533728 GCNT1Q02742 428 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 CYP24A1Q07973 514 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 FAM160B1Q5W0V3 765 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 ALS2CLQ60I27 953 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 PLA2G4FQ68DD2 849 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 C11orf63Q6NUN7 778 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 SWSAP1Q6NVH7 229 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 PPP1R2P3Q6NXS1 205 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 GJB7Q6PEY0 223 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 MAEAQ7L5Y9 396 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 NT5DC3Q86UY8 548 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 CCDC60Q8IWA6 550 aaPredicted RBP10.4□□□□□ -0.74
CHKA-207ENST00000533728 GJD3Q8N144 294 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 MREGQ8N565 214 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 FBXL13Q8NEE6 735 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 FAM167AQ96KS9 214 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 NT5C1BQ96P26 610 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 NAP1L3Q99457 506 aaPredicted RBP10.4□□□□□ -0.74
CHKA-207ENST00000533728 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.4□□□□□ -0.744e-23■□□□□ 11.2
CHKA-207ENST00000533728 LRRC1Q9BTT6 524 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 CARD9Q9H257 536 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 IKZF4Q9H2S9 585 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 SLITRK6Q9H5Y7 841 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 UBE2TQ9NPD8 197 aaPredicted RBP10.4□□□□□ -0.74
CHKA-207ENST00000533728 ZNF302Q9NR11 478 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 NRBP2Q9NSY0 501 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 HPCAL4Q9UM19 191 aa10.4□□□□□ -0.74
CHKA-207ENST00000533728 FRMPD3Q5JV73 1810 aa10.4□□□□□ -0.75
CHKA-207ENST00000533728 ZNF233A6NK53 670 aa10.39□□□□□ -0.75
CHKA-207ENST00000533728 ANKRD63C9JTQ0 380 aa10.39□□□□□ -0.75
CHKA-207ENST00000533728 PGRMC1O00264 195 aaKnown RBP10.39□□□□□ -0.75
CHKA-207ENST00000533728 FOXN3O00409 490 aaPredicted RBP10.39□□□□□ -0.75
CHKA-207ENST00000533728 EXTL3O43909 919 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms