RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 ODF2LQ9ULJ1 636 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 MTMR6Q9Y217 621 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 TCHHQ07283 1943 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 ABLIM1O14639 778 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 HNRNPDLO14979 420 aaKnown RBP11.41□□□□□ -0.58
CAPN1-225ENST00000533704 CLDN3O15551 220 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 STX6O43752 255 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 TOM1L1O75674 476 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 HSP90AA1P07900 732 aaKnown RBP11.41□□□□□ -0.58
CAPN1-225ENST00000533704 GBP2P32456 591 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-225ENST00000533704 TXLNAP40222 546 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 BRCC3P46736 316 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 LIG4P49917 911 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 NCKAP1LP55160 1127 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 SPAG1Q07617 926 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 RRAGBQ5VZM2 374 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 ZPBP2Q6X784 338 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-225ENST00000533704 OTOP3Q7RTS5 596 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 DYMQ7RTS9 669 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 HSCBQ8IWL3 235 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 LNX1Q8TBB1 728 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-225ENST00000533704 PIK3R5Q8WYR1 880 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 C18orf25Q96B23 403 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-225ENST00000533704 FAM122AQ96E09 287 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 MFSD14AQ96MC6 490 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 ZMAT2Q96NC0 199 aaKnown RBP11.41□□□□□ -0.58
CAPN1-225ENST00000533704 USP28Q96RU2 1077 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 CLSTN3Q9BQT9 956 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 CCSER1Q9C0I3 900 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 SLC38A7Q9NVC3 462 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 FBXO2Q9UK22 296 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-225ENST00000533704 TRIOO75962 3097 aa11.41□□□□□ -0.58
CAPN1-225ENST00000533704 KMT2EQ8IZD2 1858 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 TULP1O00294 542 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-225ENST00000533704 PODXLO00592 558 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 ADAM12O43184 909 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 TRAPPC3O43617 180 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 TRAK2O60296 914 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 CXCL8P10145 99 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 TKTP29401 623 aaKnown RBP11.4□□□□□ -0.58
CAPN1-225ENST00000533704 NMT1P30419 496 aaKnown RBP11.4□□□□□ -0.58
CAPN1-225ENST00000533704 SIGLEC14Q08ET2 396 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 MTMR3Q13615 1198 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 STK38Q15208 465 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 UPP1Q16831 310 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 LIN9Q5TKA1 542 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 PDXDC1Q6P996 788 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 ALKAL1Q6UXT8 129 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 C15orf39Q6ZRI6 1047 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 GPR65Q8IYL9 337 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 ZDHHC14Q8IZN3 488 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 PLCD3Q8N3E9 789 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 KRI1Q8N9T8 703 aaKnown RBP11.4□□□□□ -0.58
CAPN1-225ENST00000533704 C3orf58Q8NDZ4 430 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 CMASQ8NFW8 434 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-225ENST00000533704 FAM212AQ96EL1 285 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 DDX27Q96GQ7 796 aaKnown RBP11.4□□□□□ -0.58
CAPN1-225ENST00000533704 PANK2Q9BZ23 570 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 SMOC2Q9H3U7 446 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 PLEKHA4Q9H4M7 779 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 DAXXQ9UER7 740 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-225ENST00000533704 TBX20Q9UMR3 447 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 POLIQ9UNA4 740 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 SORCS3Q9UPU3 1222 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 USTQ9Y2C2 406 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 NUB1Q9Y5A7 615 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 SRPRBQ9Y5M8 271 aaKnown RBP11.4□□□□□ -0.58
CAPN1-225ENST00000533704 GTF3C3Q9Y5Q9 886 aa11.4□□□□□ -0.58
CAPN1-225ENST00000533704 CLUHO75153 1309 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 TMEM189-UBE2V1I3L0A0 370 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 MEFVO15553 781 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-225ENST00000533704 ZMYND10O75800 440 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 BRD1O95696 1058 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 KCNE1P15382 129 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 FGFR3P22607 806 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 OR1D2P34982 312 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 DDIT3P35638 169 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 TNFSF9P41273 254 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 ARPP19P56211 112 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 MCL1Q07820 350 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 SLC10A6Q3KNW5 377 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 FOXD4L6Q3SYB3 417 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-225ENST00000533704 PPM1LQ5SGD2 360 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 ZBTB41Q5SVQ8 909 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 LILRA6Q6PI73 481 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 CD300LGQ6UXG3 332 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 FOXD4L3Q6VB84 417 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-225ENST00000533704 GET4Q7L5D6 327 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-225ENST00000533704 SUGP1Q8IWZ8 645 aaKnown RBP11.39□□□□□ -0.59
CAPN1-225ENST00000533704 TMEM130Q8N3G9 435 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 SPRYD3Q8NCJ5 442 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 HDAC7Q8WUI4 952 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 STAMQ92783 540 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 ZNF707Q96C28 371 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-225ENST00000533704 MSTO1Q9BUK6 570 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 HAPLN2Q9GZV7 340 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 ZSCAN16Q9H4T2 348 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-225ENST00000533704 WDR6Q9NNW5 1121 aaKnown RBP11.39□□□□□ -0.59
CAPN1-225ENST00000533704 CNTN3Q9P232 1028 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms