RNA–Protein interactions for RNA: ENST00000533559.5

FNTA-213, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 3

Gene FNTA, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-213ENST00000533559 SLC7A5Q01650 507 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 GCNT1Q02742 428 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 KCNA1Q09470 495 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 ITGB3BPQ13352 177 aaPredicted RBP8.33□□□□□ -1.08
FNTA-213ENST00000533559 MTMR2Q13614 643 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 XKR3Q5GH77 459 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 NSMFQ6X4W1 530 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 SYDE1Q6ZW31 735 aaPredicted RBP8.33□□□□□ -1.08
FNTA-213ENST00000533559 KLHL7Q8IXQ5 586 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 FAM71AQ8IYT1 594 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 C7orf61Q8IZ16 206 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 IQCKQ8N0W5 287 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 DAW1Q8N136 415 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 GPD1LQ8N335 351 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 METTL13Q8N6R0 699 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 C3orf20Q8ND61 904 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 CHST13Q8NET6 341 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 POMGNT1Q8WZA1 660 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 BICD1Q96G01 975 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 PAWRQ96IZ0 340 aaKnown RBP8.33□□□□□ -1.08
FNTA-213ENST00000533559 MS4A14Q96JA4 679 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 CEP170P1Q96L14 293 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 SYT11Q9BT88 431 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 JPH1Q9HDC5 661 aaPredicted RBP8.33□□□□□ -1.08
FNTA-213ENST00000533559 PAK6Q9NQU5 681 aaPredicted RBP8.33□□□□□ -1.08
FNTA-213ENST00000533559 HOMER2Q9NSB8 354 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 C1orf112Q9NSG2 853 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.33□□□□□ -1.08
FNTA-213ENST00000533559 GTF3C4Q9UKN8 822 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 MYH11P35749 1972 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 DENND3A2RUS2 1198 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 FOXN3O00409 490 aaPredicted RBP8.32□□□□□ -1.08
FNTA-213ENST00000533559 CXCL11O14625 94 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 HNRNPDLO14979 420 aaKnown RBP8.32□□□□□ -1.08
FNTA-213ENST00000533559 SLC16A4O15374 487 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 GAS2O43903 313 aaKnown RBP8.32□□□□□ -1.08
FNTA-213ENST00000533559 BUB1BO60566 1050 aaPredicted RBP8.32□□□□□ -1.08
FNTA-213ENST00000533559 FGGP02679 453 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 FTLP02792 175 aaPredicted RBP8.32□□□□□ -1.08
FNTA-213ENST00000533559 PTPRAP18433 802 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 ABCB4P21439 1286 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 TBXAS1P24557 533 aaPredicted RBP8.32□□□□□ -1.08
FNTA-213ENST00000533559 USP8P40818 1118 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 RFC5P40937 340 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 NPTX2P47972 431 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 GCLMP48507 274 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 FNTAP49354 379 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 DNA2P51530 1060 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 DR1Q01658 176 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 PRPF4BQ13523 1007 aaKnown RBP8.32□□□□□ -1.08
FNTA-213ENST00000533559 CAMK2BQ13554 666 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 IRF5Q13568 498 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 PLS1Q14651 629 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 SLMAPQ14BN4 828 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 SURF1Q15526 300 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 STXBP2Q15833 593 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 LIN9Q5TKA1 542 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 FAM160B1Q5W0V3 765 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 SNRNP48Q6IEG0 339 aaKnown RBP8.32□□□□□ -1.08
FNTA-213ENST00000533559 KCNV1Q6PIU1 500 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 KDM7AQ6ZMT4 941 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 Q7L0L9 218 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 FASTKD5Q7L8L6 764 aaKnown RBP8.32□□□□□ -1.08
FNTA-213ENST00000533559 RPUSD2Q8IZ73 545 aaKnown RBP8.32□□□□□ -1.08
FNTA-213ENST00000533559 PPM1KQ8N3J5 372 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 TMEM161BQ8NDZ6 487 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 LMO3Q8TAP4 145 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 LNX1Q8TBB1 728 aaPredicted RBP8.32□□□□□ -1.08
FNTA-213ENST00000533559 PXYLP1Q8TE99 480 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 GRK7Q8WTQ7 553 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 SEC14L1Q92503 715 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 SHC3Q92529 594 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 FAM167AQ96KS9 214 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 ATP6V1G3Q96LB4 118 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 RNPC3Q96LT9 517 aaKnown RBP8.32□□□□□ -1.08
FNTA-213ENST00000533559 MFSD14AQ96MC6 490 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 FBXL18Q96ME1 805 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 TAAR1Q96RJ0 339 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 FNBP1Q96RU3 617 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 JPH2Q9BR39 696 aaPredicted RBP8.32□□□□□ -1.08
FNTA-213ENST00000533559 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.32□□□□□ -1.087e-6■■■■□ 23.5
FNTA-213ENST00000533559 CNOT10Q9H9A5 744 aaKnown RBP8.32□□□□□ -1.08
FNTA-213ENST00000533559 NRBP2Q9NSY0 501 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 RAB20Q9NX57 234 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 WRAP73Q9P2S5 460 aaPredicted RBP8.32□□□□□ -1.08
FNTA-213ENST00000533559 SLC9A2Q9UBY0 812 aa8.32□□□□□ -1.08
FNTA-213ENST00000533559 ZMYND8Q9ULU4 1186 aaPredicted RBP8.32□□□□□ -1.08
FNTA-213ENST00000533559 SPTBN5Q9NRC6 3674 aaKnown RBP8.32□□□□□ -1.08
FNTA-213ENST00000533559 AGPSO00116 658 aa8.31□□□□□ -1.08
FNTA-213ENST00000533559 BACH1O14867 736 aa8.31□□□□□ -1.08
FNTA-213ENST00000533559 EIF3HO15372 352 aaKnown RBP eCLIP8.31□□□□□ -1.08
FNTA-213ENST00000533559 THAP12O43422 761 aa8.31□□□□□ -1.08
FNTA-213ENST00000533559 SPOPO43791 374 aa8.31□□□□□ -1.08
FNTA-213ENST00000533559 EXTL3O43909 919 aa8.31□□□□□ -1.08
FNTA-213ENST00000533559 PHF2O75151 1096 aa8.31□□□□□ -1.08
FNTA-213ENST00000533559 CYP1A2P05177 515 aa8.31□□□□□ -1.08
FNTA-213ENST00000533559 MYBL2P10244 700 aa8.31□□□□□ -1.08
FNTA-213ENST00000533559 CTNNA2P26232 953 aa8.31□□□□□ -1.08
FNTA-213ENST00000533559 ICAM3P32942 547 aa8.31□□□□□ -1.08
FNTA-213ENST00000533559 CTNNA1P35221 906 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms