RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 GSTCDQ8NEC7 633 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 CEP63Q96MT8 703 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 MED15Q96RN5 788 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 POP1Q99575 1024 aaKnown RBP18.92■□□□□ 0.62
NXF1-216ENST00000533499 CERS4Q9HA82 394 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 SLC28A3Q9HAS3 691 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 RC3H2Q9HBD1 1191 aaKnown RBP18.92■□□□□ 0.62
NXF1-216ENST00000533499 GOLGA2P5Q9HBQ8 144 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 SLC38A7Q9NVC3 462 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 MAGEC2Q9UBF1 373 aaPredicted RBP18.92■□□□□ 0.62
NXF1-216ENST00000533499 CACNG4Q9UBN1 327 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 DNAJB4Q9UDY4 337 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 TUBGCP4Q9UGJ1 667 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 PRG3Q9Y2Y8 225 aaPredicted RBP18.92■□□□□ 0.62
NXF1-216ENST00000533499 ANK1P16157 1881 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 RALGAPA2Q2PPJ7 1873 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 XPOTO43592 962 aaKnown RBP18.91■□□□□ 0.62
NXF1-216ENST00000533499 TRIM49P0CI25 452 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 TRIM49CP0CI26 452 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 KCNE1P15382 129 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 DNAJB2P25686 324 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 ZNF165P49910 485 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 VAMP7P51809 220 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 PSMD6Q15008 389 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 SPATA1Q5VX52 437 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 INTS8Q75QN2 995 aaKnown RBP18.91■□□□□ 0.62
NXF1-216ENST00000533499 FILIP1Q7Z7B0 1213 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 USP37Q86T82 979 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 TMEM130Q8N3G9 435 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 BEST2Q8NFU1 509 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 CACTINQ8WUQ7 758 aaKnown RBP18.91■□□□□ 0.62
NXF1-216ENST00000533499 TIFAQ96CG3 184 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 MFSD14AQ96MC6 490 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 PPP1R10Q96QC0 940 aaKnown RBP18.91■□□□□ 0.62
NXF1-216ENST00000533499 FUCA2Q9BTY2 467 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 TSPY26PQ9H489 355 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 NRDE2Q9H7Z3 1164 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 AAASQ9NRG9 546 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 ARMCX3Q9UH62 379 aaPredicted RBP18.91■□□□□ 0.62
NXF1-216ENST00000533499 UBQLN1Q9UMX0 589 aaKnown RBP18.91■□□□□ 0.62
NXF1-216ENST00000533499 R3HCC1Q9Y3T6 440 aaKnown RBP18.91■□□□□ 0.62
NXF1-216ENST00000533499 NFE2L3Q9Y4A8 694 aa18.91■□□□□ 0.62
NXF1-216ENST00000533499 LINC01553A4QN01 128 aa18.9■□□□□ 0.62
NXF1-216ENST00000533499 BECN2A8MW95 431 aa18.9■□□□□ 0.62
NXF1-216ENST00000533499 NT5C1B-RDH14C9J2C7 533 aa18.9■□□□□ 0.62
NXF1-216ENST00000533499 SLC16A3O15427 465 aaKnown RBP18.9■□□□□ 0.62
NXF1-216ENST00000533499 TNNC2P02585 160 aa18.9■□□□□ 0.62
NXF1-216ENST00000533499 CTNNB1P35222 781 aa18.9■□□□□ 0.62
NXF1-216ENST00000533499 ALDH7A1P49419 539 aaKnown RBP18.9■□□□□ 0.62
NXF1-216ENST00000533499 SMAD3P84022 425 aaKnown RBP18.9■□□□□ 0.62
NXF1-216ENST00000533499 POU5F1Q01860 360 aaKnown RBP18.9■□□□□ 0.62
NXF1-216ENST00000533499 MYL5Q02045 173 aa18.9■□□□□ 0.62
NXF1-216ENST00000533499 TUSC3Q13454 348 aa18.9■□□□□ 0.62
NXF1-216ENST00000533499 XKR4Q5GH76 650 aa18.9■□□□□ 0.62
NXF1-216ENST00000533499 EFCAB13Q8IY85 973 aa18.9■□□□□ 0.62
NXF1-216ENST00000533499 RSPH1Q8WYR4 309 aa18.9■□□□□ 0.62
NXF1-216ENST00000533499 ANKRD36BP1Q96IX9 119 aa18.9■□□□□ 0.62
NXF1-216ENST00000533499 ZNF558Q96NG5 402 aa18.9■□□□□ 0.62
NXF1-216ENST00000533499 CGRRF1Q99675 332 aa18.9■□□□□ 0.62
NXF1-216ENST00000533499 MKNK1Q9BUB5 465 aa18.9■□□□□ 0.62
NXF1-216ENST00000533499 PCDHB12Q9Y5F1 795 aa18.9■□□□□ 0.62
NXF1-216ENST00000533499 COL4A6Q14031 1691 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 PDCD11Q14690 1871 aaKnown RBP18.89■□□□□ 0.61
NXF1-216ENST00000533499 INPPL1O15357 1258 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 B4GALT3O60512 393 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 PHACTR2O75167 634 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 ARHGEF15O94989 841 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 GNA14O95837 355 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 ALDH2P05091 517 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 KRT19P08727 400 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 LAG3P18627 525 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 MTIF2P46199 727 aaKnown RBP18.89■□□□□ 0.61
NXF1-216ENST00000533499 SLC11A1P49279 550 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 BCAR1P56945 870 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 DLG4P78352 724 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 SOX4Q06945 474 aaPredicted RBP18.89■□□□□ 0.61
NXF1-216ENST00000533499 BIRC3Q13489 604 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 FOXR2Q6PJQ5 311 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 LRSAM1Q6UWE0 723 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 FAM114A1Q8IWE2 563 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 ZC3H3Q8IXZ2 948 aaKnown RBP18.89■□□□□ 0.61
NXF1-216ENST00000533499 ENOX1Q8TC92 643 aaKnown RBP18.89■□□□□ 0.61
NXF1-216ENST00000533499 PLEKHO2Q8TD55 490 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 SP7Q8TDD2 431 aaPredicted RBP18.89■□□□□ 0.61
NXF1-216ENST00000533499 CNOT6LQ96LI5 555 aaKnown RBP18.89■□□□□ 0.61
NXF1-216ENST00000533499 C17orf80Q9BSJ5 609 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 MTMR12Q9C0I1 747 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 CWH43Q9H720 699 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 METTL14Q9HCE5 456 aaKnown RBP18.89■□□□□ 0.61
NXF1-216ENST00000533499 SAMSN1Q9NSI8 373 aaKnown RBP18.89■□□□□ 0.61
NXF1-216ENST00000533499 DPP3Q9NY33 737 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 FAN1Q9Y2M0 1017 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 DERAQ9Y315 318 aa18.89■□□□□ 0.61
NXF1-216ENST00000533499 LRRIQ3A6PVS8 624 aaPredicted RBP18.88■□□□□ 0.61
NXF1-216ENST00000533499 MAPK13O15264 365 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 CSPG5O95196 566 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 TAP1Q03518 808 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 BFSP1Q12934 665 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 DUOXA2Q1HG44 320 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 LRIT3Q3SXY7 679 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms