RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.4□□□□□ -0.42
CLCF1-202ENST00000533438 CEP57Q86XR8 500 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 TMEM161BQ8NDZ6 487 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 SPIRE2Q8WWL2 714 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 STAMQ92783 540 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 ATOH1Q92858 354 aaPredicted RBP12.4□□□□□ -0.42
CLCF1-202ENST00000533438 UROC1Q96N76 676 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 CCDC94Q9BW85 323 aaPredicted RBP12.4□□□□□ -0.42
CLCF1-202ENST00000533438 TARS2Q9BW92 718 aaKnown RBP12.4□□□□□ -0.42
CLCF1-202ENST00000533438 PRKD2Q9BZL6 878 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 KCNK12Q9HB15 430 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 GOLGA2P5Q9HBQ8 144 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 TOPORSQ9NS56 1045 aaPredicted RBP12.4□□□□□ -0.42
CLCF1-202ENST00000533438 KCND2Q9NZV8 630 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 FBXW11Q9UKB1 542 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 CIZ1Q9ULV3 898 aaPredicted RBP12.4□□□□□ -0.42
CLCF1-202ENST00000533438 NOTCH4Q99466 2003 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 MEFVO15553 781 aaPredicted RBP12.39□□□□□ -0.43
CLCF1-202ENST00000533438 ADAM12O43184 909 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 SLC26A4O43511 780 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 MCF2P10911 925 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 PLS3P13797 630 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 FGFR3P22607 806 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 YARSP54577 528 aaKnown RBP12.39□□□□□ -0.43
CLCF1-202ENST00000533438 RAD51AP2Q09MP3 1159 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 TDGQ13569 410 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 ZRSR1Q15695 479 aaKnown RBP12.39□□□□□ -0.43
CLCF1-202ENST00000533438 ARSHQ5FYA8 562 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 LARP1BQ659C4 914 aaKnown RBP12.39□□□□□ -0.43
CLCF1-202ENST00000533438 PDXDC1Q6P996 788 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 DCLRE1AQ6PJP8 1040 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 MPZL3Q6UWV2 235 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 C3orf58Q8NDZ4 430 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 LRRC15Q8TF66 581 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 KCNN1Q92952 543 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 AK8Q96MA6 479 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 ZMAT2Q96NC0 199 aaKnown RBP12.39□□□□□ -0.43
CLCF1-202ENST00000533438 MYADMQ96S97 322 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 PLIN2Q99541 437 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 CNTN3Q9P232 1028 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 IGSF9Q9P2J2 1179 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 EPS15L1Q9UBC2 864 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 KCNG1Q9UIX4 513 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 DUSP12Q9UNI6 340 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 ZNF292O60281 2723 aa12.39□□□□□ -0.43
CLCF1-202ENST00000533438 TOM1L1O75674 476 aa12.38□□□□□ -0.43
CLCF1-202ENST00000533438 B3GAT3O94766 335 aa12.38□□□□□ -0.43
CLCF1-202ENST00000533438 PLA2G4BP0C869 781 aa12.38□□□□□ -0.43
CLCF1-202ENST00000533438 SYT1P21579 422 aa12.38□□□□□ -0.43
CLCF1-202ENST00000533438 HOXA9P31269 272 aa12.38□□□□□ -0.43
CLCF1-202ENST00000533438 GBP2P32456 591 aaPredicted RBP12.38□□□□□ -0.43
CLCF1-202ENST00000533438 CLCN5P51795 746 aa12.38□□□□□ -0.43
CLCF1-202ENST00000533438 OSTNP61366 133 aa12.38□□□□□ -0.43
CLCF1-202ENST00000533438 RAB33AQ14088 237 aa12.38□□□□□ -0.43
CLCF1-202ENST00000533438 BRAPQ7Z569 592 aa12.38□□□□□ -0.43
CLCF1-202ENST00000533438 CDK5RAP3Q96JB5 506 aa12.38□□□□□ -0.43
CLCF1-202ENST00000533438 ZBTB45Q96K62 511 aaPredicted RBP12.38□□□□□ -0.43
CLCF1-202ENST00000533438 PIDD1Q9HB75 910 aa12.38□□□□□ -0.43
CLCF1-202ENST00000533438 SLC38A7Q9NVC3 462 aa12.38□□□□□ -0.43
CLCF1-202ENST00000533438 MTRRQ9UBK8 725 aa12.38□□□□□ -0.43
CLCF1-202ENST00000533438 SPTBN4Q9H254 2564 aa12.38□□□□□ -0.43
CLCF1-202ENST00000533438 MYH15Q9Y2K3 1946 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 NPHP3-ACAD11A0A0J9YXS1 232 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 H0Y858 1186 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 C8AP07357 584 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 HNRNPA1P09651 372 aaKnown RBP eCLIP12.37□□□□□ -0.43
CLCF1-202ENST00000533438 MAPTP10636 758 aaKnown RBP12.37□□□□□ -0.43
CLCF1-202ENST00000533438 KCNE1P15382 129 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 TKTP29401 623 aaKnown RBP12.37□□□□□ -0.43
CLCF1-202ENST00000533438 BRCC3P46736 316 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 SMTNP53814 917 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 NCKAP1LP55160 1127 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 CACNB1Q02641 598 aaPredicted RBP12.37□□□□□ -0.43
CLCF1-202ENST00000533438 GRIN1Q05586 938 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 STRN3Q13033 797 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 NOLC1Q14978 699 aaKnown RBP eCLIP12.37□□□□□ -0.43
CLCF1-202ENST00000533438 RSPO2Q6UXX9 243 aaPredicted RBP12.37□□□□□ -0.43
CLCF1-202ENST00000533438 ZPBP2Q6X784 338 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 TMEM105Q8N8V8 129 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 RSAD2Q8WXG1 361 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 DDX27Q96GQ7 796 aaKnown RBP12.37□□□□□ -0.43
CLCF1-202ENST00000533438 ACAP3Q96P50 834 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 HAPLN2Q9GZV7 340 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 BLOC1S4Q9NUP1 217 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.37□□□□□ -0.431e-6■■■□□ 17.3
CLCF1-202ENST00000533438 CHMP5Q9NZZ3 219 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 LARSQ9P2J5 1176 aaKnown RBP12.37□□□□□ -0.43
CLCF1-202ENST00000533438 ODF2LQ9ULJ1 636 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 BACE2Q9Y5Z0 518 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 FRYLO94915 3013 aa12.37□□□□□ -0.43
CLCF1-202ENST00000533438 ANK1P16157 1881 aa12.36□□□□□ -0.43
CLCF1-202ENST00000533438 PRR23AA6NEV1 266 aa12.36□□□□□ -0.43
CLCF1-202ENST00000533438 PODXLO00592 558 aa12.36□□□□□ -0.43
CLCF1-202ENST00000533438 TRAPPC3O43617 180 aa12.36□□□□□ -0.43
CLCF1-202ENST00000533438 STX6O43752 255 aa12.36□□□□□ -0.43
CLCF1-202ENST00000533438 NARSO43776 548 aaKnown RBP12.36□□□□□ -0.43
CLCF1-202ENST00000533438 BMP15O95972 392 aa12.36□□□□□ -0.43
CLCF1-202ENST00000533438 POU2F2P09086 479 aa12.36□□□□□ -0.43
CLCF1-202ENST00000533438 LAMP2P13473 410 aa12.36□□□□□ -0.43
CLCF1-202ENST00000533438 OR1D2P34982 312 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms