RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 EPC2Q52LR7 807 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 JADE1Q6IE81 842 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 TTI2Q6NXR4 508 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 KCNT2Q6UVM3 1135 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 USP37Q86T82 979 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 NT5DC4Q86YG4 428 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 COLGALT2Q8IYK4 626 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 CACTINQ8WUQ7 758 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 CCDC127Q96BQ5 260 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 MFSD14AQ96MC6 490 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 FNBP1Q96RU3 617 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 C17orf80Q9BSJ5 609 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 COLEC11Q9BWP8 271 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 PLVAPQ9BX97 442 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 HCSTQ9UBK5 93 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 DNAJB4Q9UDY4 337 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 MTUS1Q9ULD2 1270 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 UBQLN1Q9UMX0 589 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 PLAGL2Q9UPG8 496 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 C2CD2Q9Y426 696 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 LAMA2P24043 3122 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 NRP1O14786 923 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 AKAP3O75969 853 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 ARHGEF15O94989 841 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 CCDC192P0DO97 292 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 EPB41P11171 864 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 KRT13P13646 458 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 TNNI1P19237 187 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 RPL9P32969 192 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 CTNNB1P35222 781 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 CASP4P49662 377 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 KRT17Q04695 432 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 CYP24A1Q07973 514 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 DSC1Q08554 894 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 PSMD6Q15008 389 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 NAB2Q15742 525 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 TPD52L1Q16890 204 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 ZNF697Q5TEC3 545 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 GPR153Q6NV75 609 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 DCLRE1AQ6PJP8 1040 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 INTS8Q75QN2 995 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 FILIP1Q7Z7B0 1213 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 FAM186BQ8IYM0 893 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 CSGALNACT2Q8N6G5 542 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 COLGALT1Q8NBJ5 622 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 BEST2Q8NFU1 509 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 ARNTL2Q8WYA1 636 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 C18orf25Q96B23 403 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 EEF2KMTQ96G04 330 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 DDX27Q96GQ7 796 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 LRCH3Q96II8 777 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 CEP63Q96MT8 703 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 UROC1Q96N76 676 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 DUSP9Q99956 384 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 MKNK1Q9BUB5 465 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 CERS4Q9HA82 394 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 PDE11AQ9HCR9 933 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 SPG21Q9NZD8 308 aa12.18□□□□□ -0.46
TRAPPC4-211ENST00000533012 SYCE3A1L190 88 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 CASTOR2A6NHX0 329 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 NT5C1B-RDH14C9J2C7 533 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 C5orf67F2Z3F1 127 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 GNA14O95837 355 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 NFICP08651 508 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 LINC00271P0C7V0 271 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 DLATP10515 647 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 PPM1AP35813 382 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 SLC11A1P49279 550 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 CLCNKBP51801 687 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 TFAMQ00059 246 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 TYRO3Q06418 890 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 DUOXA2Q1HG44 320 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 ZSCAN23Q3MJ62 389 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 SPATA1Q5VX52 437 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 WDR49Q8IV35 697 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 ZC3H3Q8IXZ2 948 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 KLHL23Q8NBE8 558 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 FBXO22Q8NEZ5 403 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 TMC2Q8TDI7 906 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 PARD3BQ8TEW8 1205 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 C11orf84Q9BUA3 381 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 SRRTQ9BXP5 876 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 NAT10Q9H0A0 1025 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 METTL14Q9HCE5 456 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 DPP3Q9NY33 737 aa12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 PUF60Q9UHX1 559 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 PRG3Q9Y2Y8 225 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 R3HCC1Q9Y3T6 440 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-211ENST00000533012 H3BNC9 293 aa12.16□□□□□ -0.46
TRAPPC4-211ENST00000533012 SLC16A3O15427 465 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-211ENST00000533012 B4GALT3O60512 393 aa12.16□□□□□ -0.46
TRAPPC4-211ENST00000533012 TADA2AO75478 443 aa12.16□□□□□ -0.46
TRAPPC4-211ENST00000533012 FGF18O76093 207 aa12.16□□□□□ -0.46
TRAPPC4-211ENST00000533012 B3GAT3O94766 335 aa12.16□□□□□ -0.46
TRAPPC4-211ENST00000533012 TNNC2P02585 160 aa12.16□□□□□ -0.46
TRAPPC4-211ENST00000533012 TMEM191BP0C7N4 346 aa12.16□□□□□ -0.46
TRAPPC4-211ENST00000533012 PBX3P40426 434 aa12.16□□□□□ -0.46
TRAPPC4-211ENST00000533012 VAMP7P51809 220 aa12.16□□□□□ -0.46
TRAPPC4-211ENST00000533012 AP3M2P53677 418 aa12.16□□□□□ -0.46
TRAPPC4-211ENST00000533012 WNT7BP56706 349 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms