RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 ZSCAN22P10073 491 aaPredicted RBP11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 PMLP29590 882 aa11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 GBP2P32456 591 aaPredicted RBP11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 NPTX2P47972 431 aa11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 NASPP49321 788 aaPredicted RBP11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 NRLP54845 237 aa11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 PEX3P56589 373 aa11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 CSTF1Q05048 431 aaKnown RBP11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 MAPK7Q13164 816 aa11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 DMP1Q13316 513 aaPredicted RBP11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 PRPF4BQ13523 1007 aaKnown RBP11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 KARSQ15046 597 aaKnown RBP11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 HACE1Q8IYU2 909 aa11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 VPS52Q8N1B4 723 aa11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 CELF5Q8N6W0 485 aaKnown RBP11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 URGCPQ8TCY9 931 aa11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 EPSTI1Q96J88 318 aa11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 NTPCRQ9BSD7 190 aaKnown RBP11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 EIF2AQ9BY44 585 aaKnown RBP11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 ZBP1Q9H171 429 aa11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 WDR6Q9NNW5 1121 aaKnown RBP11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 KMT5AQ9NQR1 393 aa11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 TBC1D13Q9NVG8 400 aa11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 KANSL3Q9P2N6 904 aa11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 CCDC39Q9UFE4 941 aa11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 RALYQ9UKM9 306 aaKnown RBP11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 INPP5FQ9Y2H2 1132 aa11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 RBM19Q9Y4C8 960 aaKnown RBP11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 MYH15Q9Y2K3 1946 aa11.19□□□□□ -0.62
CHMP4A-206ENST00000533011 PHLPP2Q6ZVD8 1323 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 SFI1A8K8P3 1242 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 N4BP3O15049 544 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 NPTXRO95502 500 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 F13A1P00488 732 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 C1RP00736 705 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 RETP07949 1114 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 LIG1P18858 919 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 PLCG1P19174 1290 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 DDIT3P35638 169 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 TXLNAP40222 546 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 BCAR1P56945 870 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 PRKCQQ04759 706 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 RNASELQ05823 741 aaKnown RBP11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 RAD51AP2Q09MP3 1159 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 DHX8Q14562 1220 aaKnown RBP11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 STK38Q15208 465 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 TMEM132AQ24JP5 1023 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 FOXD4L5Q5VV16 416 aaPredicted RBP11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 LAIR1Q6GTX8 287 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 KANK3Q6NY19 840 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 USP49Q70CQ1 688 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 CDR2LQ86X02 465 aaPredicted RBP11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 KRI1Q8N9T8 703 aaKnown RBP11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 LINC00301Q8NCQ3 95 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 SPIRE2Q8WWL2 714 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 FOXD4L4Q8WXT5 416 aaPredicted RBP11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 RAD54LQ92698 747 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 CLIC6Q96NY7 704 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 ADPGKQ9BRR6 497 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 KIFC3Q9BVG8 833 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 RNF39Q9H2S5 420 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 TMEM134Q9H6X4 195 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 BLOC1S4Q9NUP1 217 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 TFIP11Q9UBB9 837 aaKnown RBP11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 ODF2LQ9ULJ1 636 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 HES2Q9Y543 173 aa11.18□□□□□ -0.62
CHMP4A-206ENST00000533011 ARL5CA6NH57 179 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 TTLL13PA6NNM8 815 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 SPTLC2O15270 562 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 INPPL1O15357 1258 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 ZC3H11AO75152 810 aaKnown RBP eCLIP11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 PPP6R2O75170 966 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 YEATS4O95619 227 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 PLS3P13797 630 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 GLULP15104 373 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 KLRC2P26717 231 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 PBX3P40426 434 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 SMTNP53814 917 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 PPP2R5DQ14738 602 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 ARSHQ5FYA8 562 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 ATF7IP2Q5U623 682 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 ATL3Q6DD88 541 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 GPBP1Q86WP2 473 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 LRRC15Q8TF66 581 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 RSAD2Q8WXG1 361 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 LARP4BQ92615 738 aaKnown RBP11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 FAM193BQ96PV7 902 aaPredicted RBP11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 DDX23Q9BUQ8 820 aaKnown RBP11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 NXF3Q9H4D5 531 aaKnown RBP11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 PDZD7Q9H5P4 517 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 NRDE2Q9H7Z3 1164 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 LARSQ9P2J5 1176 aaKnown RBP11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 ARHGAP28Q9P2N2 729 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 STK17AQ9UEE5 414 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 SSX2IPQ9Y2D8 614 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 GIT1Q9Y2X7 761 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 DENND4AQ7Z401 1863 aa11.17□□□□□ -0.62
CHMP4A-206ENST00000533011 NPHP3-ACAD11A0A0J9YXS1 232 aa11.16□□□□□ -0.62
CHMP4A-206ENST00000533011 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.16□□□□□ -0.62
CHMP4A-206ENST00000533011 NT5C1B-RDH14C9J2C7 533 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms