RNA–Protein interactions for RNA: ENST00000532127.5

PUF60-219, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-219ENST00000532127 GRIK3Q13003 919 aa21.15■□□□□ 0.98
PUF60-219ENST00000532127 SHHQ15465 462 aa21.15■□□□□ 0.98
PUF60-219ENST00000532127 DCAF17Q5H9S7 520 aaPredicted RBP21.15■□□□□ 0.98
PUF60-219ENST00000532127 JADE1Q6IE81 842 aa21.15■□□□□ 0.98
PUF60-219ENST00000532127 GAS2L3Q86XJ1 694 aa21.15■□□□□ 0.98
PUF60-219ENST00000532127 GSTCDQ8NEC7 633 aa21.15■□□□□ 0.98
PUF60-219ENST00000532127 KIF12Q96FN5 646 aa21.15■□□□□ 0.98
PUF60-219ENST00000532127 SLC38A7Q9NVC3 462 aa21.15■□□□□ 0.98
PUF60-219ENST00000532127 TRIP11Q15643 1979 aa21.14■□□□□ 0.98
PUF60-219ENST00000532127 LRRIQ3A6PVS8 624 aaPredicted RBP21.14■□□□□ 0.97
PUF60-219ENST00000532127 TULP1O00294 542 aaPredicted RBP21.14■□□□□ 0.97
PUF60-219ENST00000532127 XPOTO43592 962 aaKnown RBP21.14■□□□□ 0.97
PUF60-219ENST00000532127 THP07101 528 aa21.14■□□□□ 0.97
PUF60-219ENST00000532127 TRIM49P0CI25 452 aa21.14■□□□□ 0.97
PUF60-219ENST00000532127 TRIM49CP0CI26 452 aa21.14■□□□□ 0.97
PUF60-219ENST00000532127 TNNI1P19237 187 aa21.14■□□□□ 0.97
PUF60-219ENST00000532127 CDK11BP21127 795 aaKnown RBP21.14■□□□□ 0.97
PUF60-219ENST00000532127 GTF2H1P32780 548 aa21.14■□□□□ 0.97
PUF60-219ENST00000532127 AP3M2P53677 418 aa21.14■□□□□ 0.97
PUF60-219ENST00000532127 GLRA4Q5JXX5 417 aa21.14■□□□□ 0.97
PUF60-219ENST00000532127 TCERG1LQ5VWI1 586 aa21.14■□□□□ 0.97
PUF60-219ENST00000532127 CREBRFQ8IUR6 639 aa21.14■□□□□ 0.97
PUF60-219ENST00000532127 HERC6Q8IVU3 1022 aa21.14■□□□□ 0.97
PUF60-219ENST00000532127 EFCAB13Q8IY85 973 aa21.14■□□□□ 0.97
PUF60-219ENST00000532127 LRRC43Q8N309 656 aa21.14■□□□□ 0.97
PUF60-219ENST00000532127 CACTINQ8WUQ7 758 aaKnown RBP21.14■□□□□ 0.97
PUF60-219ENST00000532127 SLC35C1Q96A29 364 aa21.14■□□□□ 0.97
PUF60-219ENST00000532127 ZMAT2Q96NC0 199 aaKnown RBP21.14■□□□□ 0.97
PUF60-219ENST00000532127 CASD1Q96PB1 797 aa21.14■□□□□ 0.97
PUF60-219ENST00000532127 PPP1R10Q96QC0 940 aaKnown RBP21.14■□□□□ 0.97
PUF60-219ENST00000532127 CXCL16Q9H2A7 254 aa21.14■□□□□ 0.97
PUF60-219ENST00000532127 RC3H2Q9HBD1 1191 aaKnown RBP21.14■□□□□ 0.97
PUF60-219ENST00000532127 INTS13Q9NVM9 706 aa21.14■□□□□ 0.97
PUF60-219ENST00000532127 UBQLN1Q9UMX0 589 aaKnown RBP21.14■□□□□ 0.97
PUF60-219ENST00000532127 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.14■□□□□ 0.97
PUF60-219ENST00000532127 FNDC1Q4ZHG4 1894 aaPredicted RBP21.13■□□□□ 0.97
PUF60-219ENST00000532127 PTPRJQ12913 1337 aa21.13■□□□□ 0.97
PUF60-219ENST00000532127 COL4A6Q14031 1691 aa21.13■□□□□ 0.97
PUF60-219ENST00000532127 TBKBP1A7MCY6 615 aa21.13■□□□□ 0.97
PUF60-219ENST00000532127 GATMP50440 423 aa21.13■□□□□ 0.97
PUF60-219ENST00000532127 AFF1P51825 1210 aaKnown RBP21.13■□□□□ 0.97
PUF60-219ENST00000532127 DLG4P78352 724 aa21.13■□□□□ 0.97
PUF60-219ENST00000532127 TFAMQ00059 246 aaKnown RBP21.13■□□□□ 0.97
PUF60-219ENST00000532127 MAN2A1Q16706 1144 aa21.13■□□□□ 0.97
PUF60-219ENST00000532127 DUOXA2Q1HG44 320 aa21.13■□□□□ 0.97
PUF60-219ENST00000532127 C1orf220Q5T0J3 134 aa21.13■□□□□ 0.97
PUF60-219ENST00000532127 FAM117BQ6P1L5 589 aa21.13■□□□□ 0.97
PUF60-219ENST00000532127 TMCO2Q7Z6W1 182 aaPredicted RBP21.13■□□□□ 0.97
PUF60-219ENST00000532127 YME1L1Q96TA2 773 aa21.13■□□□□ 0.97
PUF60-219ENST00000532127 POP1Q99575 1024 aaKnown RBP21.13■□□□□ 0.97
PUF60-219ENST00000532127 TUBGCP2Q9BSJ2 902 aa21.13■□□□□ 0.97
PUF60-219ENST00000532127 RBSNQ9H1K0 784 aa21.13■□□□□ 0.97
PUF60-219ENST00000532127 TBC1D13Q9NVG8 400 aa21.13■□□□□ 0.97
PUF60-219ENST00000532127 LIMA1Q9UHB6 759 aaKnown RBP21.13■□□□□ 0.97
PUF60-219ENST00000532127 POMCP01189 267 aa21.12■□□□□ 0.97
PUF60-219ENST00000532127 TNNC2P02585 160 aa21.12■□□□□ 0.97
PUF60-219ENST00000532127 TPM2P07951 284 aa21.12■□□□□ 0.97
PUF60-219ENST00000532127 TMEM191BP0C7N4 346 aa21.12■□□□□ 0.97
PUF60-219ENST00000532127 ATP1A3P13637 1013 aa21.12■□□□□ 0.97
PUF60-219ENST00000532127 PRKCSHP14314 528 aaPredicted RBP21.12■□□□□ 0.97
PUF60-219ENST00000532127 CYP3A5P20815 502 aa21.12■□□□□ 0.97
PUF60-219ENST00000532127 HTRA4P83105 476 aaPredicted RBP21.12■□□□□ 0.97
PUF60-219ENST00000532127 KRT31Q15323 416 aa21.12■□□□□ 0.97
PUF60-219ENST00000532127 ZBTB6Q15916 424 aa21.12■□□□□ 0.97
PUF60-219ENST00000532127 CMTR2Q8IYT2 770 aaKnown RBP21.12■□□□□ 0.97
PUF60-219ENST00000532127 BEST2Q8NFU1 509 aa21.12■□□□□ 0.97
PUF60-219ENST00000532127 ZNF689Q96CS4 500 aaPredicted RBP21.12■□□□□ 0.97
PUF60-219ENST00000532127 ANKRD36BP1Q96IX9 119 aa21.12■□□□□ 0.97
PUF60-219ENST00000532127 ZBED2Q9BTP6 218 aa21.12■□□□□ 0.97
PUF60-219ENST00000532127 MTMR12Q9C0I1 747 aa21.12■□□□□ 0.97
PUF60-219ENST00000532127 MIOSQ9NXC5 875 aa21.12■□□□□ 0.97
PUF60-219ENST00000532127 PLAGL2Q9UPG8 496 aa21.12■□□□□ 0.97
PUF60-219ENST00000532127 RANBP2P49792 3224 aaKnown RBP21.12■□□□□ 0.97
PUF60-219ENST00000532127 TDRD15B5MCY1 1934 aaKnown RBP21.12■□□□□ 0.97
PUF60-219ENST00000532127 N4BP1O75113 896 aaKnown RBP21.11■□□□□ 0.97
PUF60-219ENST00000532127 RNASELQ05823 741 aaKnown RBP21.11■□□□□ 0.97
PUF60-219ENST00000532127 NAB2Q15742 525 aa21.11■□□□□ 0.97
PUF60-219ENST00000532127 LMBRD2Q68DH5 695 aaPredicted RBP21.11■□□□□ 0.97
PUF60-219ENST00000532127 OR5B17Q8NGF7 314 aa21.11■□□□□ 0.97
PUF60-219ENST00000532127 INSL6Q9Y581 213 aa21.11■□□□□ 0.97
PUF60-219ENST00000532127 AFPP02771 609 aaKnown RBP21.1■□□□□ 0.97
PUF60-219ENST00000532127 GCLMP48507 274 aa21.1■□□□□ 0.97
PUF60-219ENST00000532127 MXI1P50539 228 aa21.1■□□□□ 0.97
PUF60-219ENST00000532127 PPP3CAQ08209 521 aa21.1■□□□□ 0.97
PUF60-219ENST00000532127 KCNH2Q12809 1159 aa21.1■□□□□ 0.97
PUF60-219ENST00000532127 TUSC3Q13454 348 aa21.1■□□□□ 0.97
PUF60-219ENST00000532127 PAN2Q504Q3 1202 aaKnown RBP21.1■□□□□ 0.97
PUF60-219ENST00000532127 C18orf25Q96B23 403 aaPredicted RBP21.1■□□□□ 0.97
PUF60-219ENST00000532127 RAD9AQ99638 391 aa21.1■□□□□ 0.97
PUF60-219ENST00000532127 TMEM8AQ9HCN3 771 aa21.1■□□□□ 0.97
PUF60-219ENST00000532127 TAB2Q9NYJ8 693 aa21.1■□□□□ 0.97
PUF60-219ENST00000532127 TUBGCP4Q9UGJ1 667 aa21.1■□□□□ 0.97
PUF60-219ENST00000532127 ITGA11Q9UKX5 1188 aa21.1■□□□□ 0.97
PUF60-219ENST00000532127 LRRC10BA6NIK2 292 aa21.09■□□□□ 0.97
PUF60-219ENST00000532127 TLL1O43897 1013 aa21.09■□□□□ 0.97
PUF60-219ENST00000532127 COPB1P53618 953 aaKnown RBP21.09■□□□□ 0.97
PUF60-219ENST00000532127 DSC1Q08554 894 aa21.09■□□□□ 0.97
PUF60-219ENST00000532127 BIRC3Q13489 604 aa21.09■□□□□ 0.97
PUF60-219ENST00000532127 BTG3Q14201 252 aaPredicted RBP21.09■□□□□ 0.97
PUF60-219ENST00000532127 VWA3BQ502W6 1294 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms