RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 RAVER1Q8IY67 606 aaKnown RBP6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 PAF1Q8N7H5 531 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 PRPF31Q8WWY3 499 aaKnown RBP6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 NINJ1Q92982 152 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 TOP1MTQ969P6 601 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 YME1L1Q96TA2 773 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 FDXACB1Q9BRP7 624 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 INO80BQ9C086 356 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 NPHS2Q9NP85 383 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 C1orf112Q9NSG2 853 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 DDX19AQ9NUU7 478 aaKnown RBP6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 PGPEP1Q9NXJ5 209 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 GOLGA6AQ9NYA3 693 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 DBR1Q9UK59 544 aaKnown RBP6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 FBXO9Q9UK97 447 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 INSL6Q9Y581 213 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 E2F8A0AVK6 867 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 LCHNA4D1U4 455 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 A6NHS1 94 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 NRDCO43847 1150 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 MGEA5O60502 916 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 USO1O60763 962 aaKnown RBP6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 CSDE1O75534 798 aaKnown RBP6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 ADH1CP00326 375 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 IL2RAP01589 272 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 STAG3L1P0CL83 205 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 ZSCAN20P17040 1043 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 MAN1A1P33908 653 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 LONP1P36776 959 aaKnown RBP6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 UBA7P41226 1012 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 PHKA2P46019 1235 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 GIPRP48546 466 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 HTRA4P83105 476 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 CEBPZQ03701 1054 aaKnown RBP6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 TFDP1Q14186 410 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 AXDND1Q5T1B0 1012 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 FAM173BQ6P4H8 233 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 SLC24A5Q71RS6 500 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 MAEAQ7L5Y9 396 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 RTN4RL1Q86UN2 441 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 THNSL2Q86YJ6 484 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 SLITRK4Q8IW52 837 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 CHPFQ8IZ52 775 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 RNF149Q8NC42 400 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 MCPH1Q8NEM0 835 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 ST13P5Q8NFI4 369 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 ATL2Q8NHH9 583 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 RASSF8Q8NHQ8 419 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 LINC01599Q8WXQ3 324 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 ARNTL2Q8WYA1 636 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 CDK5RAP3Q96JB5 506 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 RHOVQ96L33 236 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 AK8Q96MA6 479 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 GUCD1Q96NT3 240 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 CDX2Q99626 313 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 ADAM2Q99965 735 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 POLR3FQ9H1D9 316 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 BHMT2Q9H2M3 363 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 XPNPEP1Q9NQW7 623 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 RGS18Q9NS28 235 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 UBP1Q9NZI7 540 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 FOXD3Q9UJU5 478 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 DNM3Q9UQ16 869 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 HCN4Q9Y3Q4 1203 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 CLIC4Q9Y696 253 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 USP3Q9Y6I4 520 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 SCN5AQ14524 2016 aa6.38□□□□□ -1.39
HMGB1P42-201ENST00000532126 CCDC163A0A0D9SF12 145 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 LINC01553A4QN01 128 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 C9IYK1 514 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 E9PMD0 336 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 DGKIO75912 1065 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 ARHGEF15O94989 841 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 EYA4O95677 639 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 BPNT1O95861 308 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 SCGB1D2O95969 90 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 ZSCAN22P10073 491 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 IMPDH2P12268 514 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 FOSL2P15408 326 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 CYP11B2P19099 503 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 FGFR4P22455 802 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 ARL2P36404 184 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 SARSP49591 514 aaKnown RBP6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 TAP1Q03518 808 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 KCNC4Q03721 635 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 NCBP1Q09161 790 aaKnown RBP6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 MMRN1Q13201 1228 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 CAPSQ13938 189 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 BECN1Q14457 450 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 PTPAQ15257 358 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 PERM1Q5SV97 790 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 FAM102BQ5T8I3 360 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 CATSPER4Q7RTX7 472 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 SRGAP1Q7Z6B7 1085 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 CABP7Q86V35 215 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 GALNT12Q8IXK2 581 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 FIBCD1Q8N539 461 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 ASAP3Q8TDY4 903 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 MYLIPQ8WY64 445 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 PMEPA1Q969W9 287 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms