RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 DDX27Q96GQ7 796 aaKnown RBP12.84□□□□□ -0.35
PPFIA1-220ENST00000532024 TMEM169Q96HH4 297 aa12.84□□□□□ -0.35
PPFIA1-220ENST00000532024 PPP1R10Q96QC0 940 aaKnown RBP12.84□□□□□ -0.35
PPFIA1-220ENST00000532024 COLEC11Q9BWP8 271 aa12.84□□□□□ -0.35
PPFIA1-220ENST00000532024 NAT10Q9H0A0 1025 aaKnown RBP12.84□□□□□ -0.35
PPFIA1-220ENST00000532024 SEMA6BQ9H3T3 888 aa12.84□□□□□ -0.35
PPFIA1-220ENST00000532024 CWH43Q9H720 699 aa12.84□□□□□ -0.35
PPFIA1-220ENST00000532024 SPG21Q9NZD8 308 aa12.84□□□□□ -0.35
PPFIA1-220ENST00000532024 TMEM63CQ9P1W3 806 aa12.84□□□□□ -0.35
PPFIA1-220ENST00000532024 RWDD2AQ9UIY3 292 aa12.84□□□□□ -0.35
PPFIA1-220ENST00000532024 MTUS1Q9ULD2 1270 aa12.84□□□□□ -0.35
PPFIA1-220ENST00000532024 FAN1Q9Y2M0 1017 aa12.84□□□□□ -0.35
PPFIA1-220ENST00000532024 SOX1O00570 391 aaPredicted RBP12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 SLC16A3O15427 465 aaKnown RBP12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 ADRB2P07550 413 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 TMEM191BP0C7N4 346 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 CD44P16070 742 aaKnown RBP12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 CYP3A5P20815 502 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 ERCC5P28715 1186 aaPredicted RBP12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 RPL9P32969 192 aaKnown RBP12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 DSC1Q08554 894 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 BMS1Q14692 1282 aaKnown RBP12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 DPCR1Q3MIW9 517 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 EPC2Q52LR7 807 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 CRELD2Q6UXH1 353 aaPredicted RBP12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 LRRC55Q6ZSA7 311 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 INTS8Q75QN2 995 aaKnown RBP12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 ZNF280BQ86YH2 543 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 FAM186BQ8IYM0 893 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 CSGALNACT2Q8N6G5 542 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 RDH13Q8NBN7 331 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 GSTCDQ8NEC7 633 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 ARNTL2Q8WYA1 636 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 LRCH3Q96II8 777 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 ANKRD36BP1Q96IX9 119 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 CEP63Q96MT8 703 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 C17orf80Q9BSJ5 609 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 MKNK1Q9BUB5 465 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 NRDE2Q9H7Z3 1164 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 DMAC2Q9NW81 257 aa12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 PUF60Q9UHX1 559 aaKnown RBP12.83□□□□□ -0.36
PPFIA1-220ENST00000532024 NLRC5Q86WI3 1866 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 C5orf67F2Z3F1 127 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 STX10O60499 249 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 DDHD2O94830 711 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 GNA14O95837 355 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 TNNC2P02585 160 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 CCDC192P0DO97 292 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 DLATP10515 647 aaKnown RBP12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 TNNI1P19237 187 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 PAX3P23760 479 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 AFF1P51825 1210 aaKnown RBP12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 AP3M2P53677 418 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 TFAMQ00059 246 aaKnown RBP12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 UBE3AQ05086 875 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 CYP24A1Q07973 514 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 PSMD6Q15008 389 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 ANKRD40Q6AI12 368 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 JADE1Q6IE81 842 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 WDR49Q8IV35 697 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 COLGALT2Q8IYK4 626 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 CCDC127Q96BQ5 260 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 PDE11AQ9HCR9 933 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 MIOSQ9NXC5 875 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 DNAJB4Q9UDY4 337 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 PLAGL2Q9UPG8 496 aa12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 PRG3Q9Y2Y8 225 aaPredicted RBP12.82□□□□□ -0.36
PPFIA1-220ENST00000532024 KIAA1671Q9BY89 1806 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 TRIM49BA6NDI0 452 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 CASTOR2A6NHX0 329 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 NRP1O14786 923 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 TRAPPC3O43617 180 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 TADA2AO75478 443 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 FGF18O76093 207 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 GALTP07902 379 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 NFICP08651 508 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 SLC11A1P49279 550 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 ENPEPQ07075 957 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 ELAVL2Q12926 359 aaKnown RBP12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 GPM6BQ13491 265 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 PTPROQ16827 1216 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 DUOXA2Q1HG44 320 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 CCDC40Q4G0X9 1142 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 SPATA1Q5VX52 437 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 TTI2Q6NXR4 508 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 FAM114A1Q8IWE2 563 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 SLC39A11Q8N1S5 342 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 TMC2Q8TDI7 906 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 MFSD14AQ96MC6 490 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 ZMAT2Q96NC0 199 aaKnown RBP12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 GAS2L1Q99501 681 aaPredicted RBP12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 CGRRF1Q99675 332 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 LMAN2LQ9H0V9 348 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 CERS4Q9HA82 394 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 METTL14Q9HCE5 456 aaKnown RBP12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 HCSTQ9UBK5 93 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 ARMCX3Q9UH62 379 aaPredicted RBP12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 ITGA11Q9UKX5 1188 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 LZTS1Q9Y250 596 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 NUB1Q9Y5A7 615 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms