RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 ZFP14Q9HCL3 533 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 PARD6AQ9NPB6 346 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 PDRG1Q9NUG6 133 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 KCNH3Q9ULD8 1083 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.2□□□□□ -0.78
NEDD8-206ENST00000531430 ACACBO00763 2458 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 TTLL13PA6NNM8 815 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 PTGESO14684 152 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 TRAPPC3O43617 180 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 ECI2O75521 394 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 CDKL5O76039 1030 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 REC8O95072 547 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 PAPLNO95428 1278 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 PRKCBP05771 671 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 CEBPBP17676 345 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 TKTP29401 623 aaKnown RBP10.19□□□□□ -0.78
NEDD8-206ENST00000531430 GDI1P31150 447 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 HOXA9P31269 272 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 BRCC3P46736 316 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 RARRES1P49788 294 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 CLCNKBP51801 687 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 OSTNP61366 133 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 NR5A1Q13285 461 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 MAPK6Q16659 721 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 SLC5A9Q2M3M2 681 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 EARS2Q5JPH6 523 aaKnown RBP10.19□□□□□ -0.78
NEDD8-206ENST00000531430 PPM1JQ5JR12 505 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 HEATR6Q6AI08 1181 aaKnown RBP10.19□□□□□ -0.78
NEDD8-206ENST00000531430 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.19□□□□□ -0.78
NEDD8-206ENST00000531430 FAM3CQ92520 227 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 CLDN23Q96B33 292 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 ELSPBP1Q96BH3 223 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 TCEAL4Q96EI5 215 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 HSD17B14Q9BPX1 270 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 TRMT61BQ9BVS5 477 aaKnown RBP10.19□□□□□ -0.78
NEDD8-206ENST00000531430 EPC1Q9H2F5 836 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 PDZD7Q9H5P4 517 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 CYP4F11Q9HBI6 524 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 GDE1Q9NZC3 331 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 DNAH14Q0VDD8 3507 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 FANCMQ8IYD8 2048 aa10.19□□□□□ -0.78
NEDD8-206ENST00000531430 ZNF197O14709 1029 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 LILRB5O75023 590 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 MYL4P12829 197 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 GJA1P17302 382 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 FGFR3P22607 806 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 KRT2P35908 639 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 VIPR2P41587 438 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 RPS9P46781 194 aaKnown RBP10.18□□□□□ -0.78
NEDD8-206ENST00000531430 SPIRE1Q08AE8 756 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 SCRN1Q12765 414 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 FZD5Q13467 585 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 SIM2Q14190 667 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-206ENST00000531430 FAM78AQ5JUQ0 283 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 CYP4A22Q5TCH4 519 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 EEF1DP3Q658K8 133 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 IQCEQ6IPM2 695 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 ANKS3Q6ZW76 656 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 PDZD4Q76G19 769 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-206ENST00000531430 CENPQQ7L2Z9 268 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-206ENST00000531430 ELMOD1Q8N336 334 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 CELF5Q8N6W0 485 aaKnown RBP10.18□□□□□ -0.78
NEDD8-206ENST00000531430 TTC8Q8TAM2 541 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 IRF7Q92985 503 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 ZNF512Q96ME7 567 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-206ENST00000531430 NFKBIZQ9BYH8 718 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 FAM126AQ9BYI3 521 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-206ENST00000531430 C2orf40Q9H1Z8 148 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 FZD8Q9H461 694 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 GOLGA2P5Q9HBQ8 144 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 BRMS1Q9HCU9 246 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 ORC3Q9UBD5 711 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-206ENST00000531430 MTRRQ9UBK8 725 aa10.18□□□□□ -0.78
NEDD8-206ENST00000531430 CHURC1-FNTBB4DL54 471 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 ACKR2O00590 384 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 ZNF263O14978 683 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 TGM1P22735 817 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 CCNE1P24864 410 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 CXCL12P48061 93 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 FNTBP49356 437 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 KPNA1P52294 538 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-206ENST00000531430 SRSF5Q13243 272 aaKnown RBP10.17□□□□□ -0.78
NEDD8-206ENST00000531430 POTEHQ6S545 545 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 PPP4R3CPQ6ZMV5 832 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 CEP68Q76N32 757 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-206ENST00000531430 YAF2Q8IY57 180 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 HS6ST3Q8IZP7 471 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 FAM177A1Q8N128 213 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-206ENST00000531430 MCPH1Q8NEM0 835 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 ZNF461Q8TAF7 563 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 CSGALNACT1Q8TDX6 532 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 PRIMPOLQ96LW4 560 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 NACC1Q96RE7 527 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 TCHPQ9BT92 498 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 SLITRK6Q9H5Y7 841 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 ZNF334Q9HCZ1 680 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-206ENST00000531430 NUB1Q9Y5A7 615 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 BACE2Q9Y5Z0 518 aa10.17□□□□□ -0.78
NEDD8-206ENST00000531430 PIAS3Q9Y6X2 628 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms