RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 C8AP07357 584 aa24.4■■□□□ 1.5
TRAPPC4-210ENST00000531290 HARSP12081 509 aaKnown RBP24.4■■□□□ 1.5
TRAPPC4-210ENST00000531290 OR1D2P34982 312 aa24.4■■□□□ 1.5
TRAPPC4-210ENST00000531290 RAB33AQ14088 237 aa24.4■■□□□ 1.5
TRAPPC4-210ENST00000531290 XKR4Q5GH76 650 aa24.4■■□□□ 1.5
TRAPPC4-210ENST00000531290 TMEM105Q8N8V8 129 aa24.4■■□□□ 1.5
TRAPPC4-210ENST00000531290 RSAD2Q8WXG1 361 aa24.4■■□□□ 1.5
TRAPPC4-210ENST00000531290 ATOH1Q92858 354 aaPredicted RBP24.4■■□□□ 1.5
TRAPPC4-210ENST00000531290 AK8Q96MA6 479 aa24.4■■□□□ 1.5
TRAPPC4-210ENST00000531290 GALR2O43603 387 aaPredicted RBP24.39■■□□□ 1.49
TRAPPC4-210ENST00000531290 XYLBO75191 536 aa24.39■■□□□ 1.49
TRAPPC4-210ENST00000531290 LAMP2P13473 410 aa24.39■■□□□ 1.49
TRAPPC4-210ENST00000531290 PROZP22891 400 aa24.39■■□□□ 1.49
TRAPPC4-210ENST00000531290 FSHRP23945 695 aa24.39■■□□□ 1.49
TRAPPC4-210ENST00000531290 IGFBP6P24592 240 aaPredicted RBP24.39■■□□□ 1.49
TRAPPC4-210ENST00000531290 SLC12A3P55017 1021 aa24.39■■□□□ 1.49
TRAPPC4-210ENST00000531290 ANKS3Q6ZW76 656 aa24.39■■□□□ 1.49
TRAPPC4-210ENST00000531290 GRASPQ7Z6J2 395 aaPredicted RBP24.39■■□□□ 1.49
TRAPPC4-210ENST00000531290 PHOX2BQ99453 314 aa24.39■■□□□ 1.49
TRAPPC4-210ENST00000531290 MTRRQ9UBK8 725 aa24.39■■□□□ 1.49
TRAPPC4-210ENST00000531290 POLIQ9UNA4 740 aa24.39■■□□□ 1.49
TRAPPC4-210ENST00000531290 ZDBF2Q9HCK1 2354 aa24.39■■□□□ 1.49
TRAPPC4-210ENST00000531290 TOM1L1O75674 476 aa24.38■■□□□ 1.49
TRAPPC4-210ENST00000531290 KCNE1P15382 129 aa24.38■■□□□ 1.49
TRAPPC4-210ENST00000531290 UBA7P41226 1012 aa24.38■■□□□ 1.49
TRAPPC4-210ENST00000531290 UVSSAQ2YD98 709 aa24.38■■□□□ 1.49
TRAPPC4-210ENST00000531290 AXDND1Q5T1B0 1012 aaPredicted RBP24.38■■□□□ 1.49
TRAPPC4-210ENST00000531290 SIX5Q8N196 739 aa24.38■■□□□ 1.49
TRAPPC4-210ENST00000531290 SLC44A3Q8N4M1 653 aa24.38■■□□□ 1.49
TRAPPC4-210ENST00000531290 TMEM161BQ8NDZ6 487 aa24.38■■□□□ 1.49
TRAPPC4-210ENST00000531290 CALML4Q96GE6 196 aa24.38■■□□□ 1.49
TRAPPC4-210ENST00000531290 ZBTB45Q96K62 511 aaPredicted RBP24.38■■□□□ 1.49
TRAPPC4-210ENST00000531290 SNX27Q96L92 541 aa24.38■■□□□ 1.49
TRAPPC4-210ENST00000531290 LARSQ9P2J5 1176 aaKnown RBP24.38■■□□□ 1.49
TRAPPC4-210ENST00000531290 ANKFY1Q9P2R3 1169 aa24.38■■□□□ 1.49
TRAPPC4-210ENST00000531290 BACE2Q9Y5Z0 518 aa24.38■■□□□ 1.49
TRAPPC4-210ENST00000531290 CDY1Q9Y6F8 540 aa24.38■■□□□ 1.49
TRAPPC4-210ENST00000531290 ZFP37Q9Y6Q3 630 aaPredicted RBP24.38■■□□□ 1.49
TRAPPC4-210ENST00000531290 H0Y858 1186 aa24.37■■□□□ 1.49
TRAPPC4-210ENST00000531290 H0YCG3 227 aa24.37■■□□□ 1.49
TRAPPC4-210ENST00000531290 I3L4J1 428 aa24.37■■□□□ 1.49
TRAPPC4-210ENST00000531290 SLC26A4O43511 780 aa24.37■■□□□ 1.49
TRAPPC4-210ENST00000531290 NARSO43776 548 aaKnown RBP24.37■■□□□ 1.49
TRAPPC4-210ENST00000531290 MAPTP10636 758 aaKnown RBP24.37■■□□□ 1.49
TRAPPC4-210ENST00000531290 TKTP29401 623 aaKnown RBP24.37■■□□□ 1.49
TRAPPC4-210ENST00000531290 HOXA9P31269 272 aa24.37■■□□□ 1.49
TRAPPC4-210ENST00000531290 RPL9P32969 192 aaKnown RBP24.37■■□□□ 1.49
TRAPPC4-210ENST00000531290 BRCC3P46736 316 aa24.37■■□□□ 1.49
TRAPPC4-210ENST00000531290 SOX4Q06945 474 aaPredicted RBP24.37■■□□□ 1.49
TRAPPC4-210ENST00000531290 TMEM119Q4V9L6 283 aa24.37■■□□□ 1.49
TRAPPC4-210ENST00000531290 CD300LGQ6UXG3 332 aa24.37■■□□□ 1.49
TRAPPC4-210ENST00000531290 ZPBP2Q6X784 338 aa24.37■■□□□ 1.49
TRAPPC4-210ENST00000531290 SLC7A14Q8TBB6 771 aa24.37■■□□□ 1.49
TRAPPC4-210ENST00000531290 ZMAT2Q96NC0 199 aaKnown RBP24.37■■□□□ 1.49
TRAPPC4-210ENST00000531290 TBC1D32Q96NH3 1257 aa24.37■■□□□ 1.49
TRAPPC4-210ENST00000531290 STK25O00506 426 aa24.36■■□□□ 1.49
TRAPPC4-210ENST00000531290 PODXLO00592 558 aa24.36■■□□□ 1.49
TRAPPC4-210ENST00000531290 ABLIM1O14639 778 aa24.36■■□□□ 1.49
TRAPPC4-210ENST00000531290 CCL16O15467 120 aa24.36■■□□□ 1.49
TRAPPC4-210ENST00000531290 CLDN3O15551 220 aa24.36■■□□□ 1.49
TRAPPC4-210ENST00000531290 BMP15O95972 392 aa24.36■■□□□ 1.49
TRAPPC4-210ENST00000531290 CFHP08603 1231 aa24.36■■□□□ 1.49
TRAPPC4-210ENST00000531290 MATR3P43243 847 aaKnown RBP eCLIP24.36■■□□□ 1.49
TRAPPC4-210ENST00000531290 NOLC1Q14978 699 aaKnown RBP eCLIP24.36■■□□□ 1.49
TRAPPC4-210ENST00000531290 RTL10Q7L3V2 364 aa24.36■■□□□ 1.49
TRAPPC4-210ENST00000531290 C3orf58Q8NDZ4 430 aa24.36■■□□□ 1.49
TRAPPC4-210ENST00000531290 FAM86C1Q9NVL1 165 aa24.36■■□□□ 1.49
TRAPPC4-210ENST00000531290 CNTN3Q9P232 1028 aa24.36■■□□□ 1.49
TRAPPC4-210ENST00000531290 WNT16Q9UBV4 365 aa24.36■■□□□ 1.49
TRAPPC4-210ENST00000531290 NUB1Q9Y5A7 615 aa24.36■■□□□ 1.49
TRAPPC4-210ENST00000531290 NPHP3-ACAD11A0A0J9YXS1 232 aa24.35■■□□□ 1.49
TRAPPC4-210ENST00000531290 CACNB1Q02641 598 aaPredicted RBP24.35■■□□□ 1.49
TRAPPC4-210ENST00000531290 RSPO2Q6UXX9 243 aaPredicted RBP24.35■■□□□ 1.49
TRAPPC4-210ENST00000531290 BRAPQ7Z569 592 aa24.35■■□□□ 1.49
TRAPPC4-210ENST00000531290 RASSF8Q8NHQ8 419 aa24.35■■□□□ 1.49
TRAPPC4-210ENST00000531290 BICD1Q96G01 975 aa24.35■■□□□ 1.49
TRAPPC4-210ENST00000531290 CDH7Q9ULB5 785 aa24.35■■□□□ 1.49
TRAPPC4-210ENST00000531290 TDRD15B5MCY1 1934 aaKnown RBP24.34■■□□□ 1.49
TRAPPC4-210ENST00000531290 SRFP11831 508 aa24.34■■□□□ 1.49
TRAPPC4-210ENST00000531290 RFX1P22670 979 aa24.34■■□□□ 1.49
TRAPPC4-210ENST00000531290 NTHL1P78549 312 aa24.34■■□□□ 1.49
TRAPPC4-210ENST00000531290 DHX8Q14562 1220 aaKnown RBP24.34■■□□□ 1.49
TRAPPC4-210ENST00000531290 ARSHQ5FYA8 562 aa24.34■■□□□ 1.49
TRAPPC4-210ENST00000531290 C18orf25Q96B23 403 aaPredicted RBP24.34■■□□□ 1.49
TRAPPC4-210ENST00000531290 RTP3Q9BQQ7 232 aa24.34■■□□□ 1.49
TRAPPC4-210ENST00000531290 ODF2LQ9ULJ1 636 aa24.34■■□□□ 1.49
TRAPPC4-210ENST00000531290 ANHXE9PGG2 379 aa24.33■■□□□ 1.49
TRAPPC4-210ENST00000531290 SYN3O14994 580 aa24.33■■□□□ 1.49
TRAPPC4-210ENST00000531290 POU2F2P09086 479 aa24.33■■□□□ 1.49
TRAPPC4-210ENST00000531290 NPR3P17342 541 aa24.33■■□□□ 1.49
TRAPPC4-210ENST00000531290 AOC1P19801 751 aa24.33■■□□□ 1.49
TRAPPC4-210ENST00000531290 ELF1P32519 619 aa24.33■■□□□ 1.49
TRAPPC4-210ENST00000531290 MCL1Q07820 350 aa24.33■■□□□ 1.49
TRAPPC4-210ENST00000531290 SLC10A6Q3KNW5 377 aa24.33■■□□□ 1.49
TRAPPC4-210ENST00000531290 SEZ6Q53EL9 994 aa24.33■■□□□ 1.49
TRAPPC4-210ENST00000531290 VARS2Q5ST30 1063 aaKnown RBP24.33■■□□□ 1.49
TRAPPC4-210ENST00000531290 CWF19L1Q69YN2 538 aaKnown RBP24.33■■□□□ 1.49
TRAPPC4-210ENST00000531290 HAUS6Q7Z4H7 955 aa24.33■■□□□ 1.49
TRAPPC4-210ENST00000531290 GPBP1Q86WP2 473 aa24.33■■□□□ 1.49
TRAPPC4-210ENST00000531290 NUMBLQ9Y6R0 609 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms