RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 ASB7Q9H672 318 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 RWDD3Q9Y3V2 267 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 COL4A4P53420 1690 aaPredicted RBP23.16■■□□□ 1.3
CAPN1-220ENST00000530567 LRRC63Q05C16 580 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 SPOUT1Q5T280 376 aaKnown RBP23.16■■□□□ 1.3
CAPN1-220ENST00000530567 JADE1Q6IE81 842 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 FOXR2Q6PJQ5 311 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 EFCAB13Q8IY85 973 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 RDH13Q8NBN7 331 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 SYAP1Q96A49 352 aaPredicted RBP23.16■■□□□ 1.3
CAPN1-220ENST00000530567 KIF12Q96FN5 646 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 ZNF558Q96NG5 402 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 DUSP9Q99956 384 aaKnown RBP23.16■■□□□ 1.3
CAPN1-220ENST00000530567 PAAF1Q9BRP4 392 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 TMEM175Q9BSA9 504 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 TUBGCP4Q9UGJ1 667 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 AKAP3O75969 853 aa23.15■■□□□ 1.3
CAPN1-220ENST00000530567 IL18RAPO95256 599 aa23.15■■□□□ 1.3
CAPN1-220ENST00000530567 CYP24A1Q07973 514 aa23.15■■□□□ 1.3
CAPN1-220ENST00000530567 PAK1Q13153 545 aa23.15■■□□□ 1.3
CAPN1-220ENST00000530567 SLC39A11Q8N1S5 342 aa23.15■■□□□ 1.3
CAPN1-220ENST00000530567 PLEKHO2Q8TD55 490 aa23.15■■□□□ 1.3
CAPN1-220ENST00000530567 BCL7CQ8WUZ0 217 aaPredicted RBP23.15■■□□□ 1.3
CAPN1-220ENST00000530567 ARNTL2Q8WYA1 636 aa23.15■■□□□ 1.3
CAPN1-220ENST00000530567 EEF2KMTQ96G04 330 aa23.15■■□□□ 1.3
CAPN1-220ENST00000530567 MFSD14AQ96MC6 490 aa23.15■■□□□ 1.3
CAPN1-220ENST00000530567 FAM193BQ96PV7 902 aaPredicted RBP23.15■■□□□ 1.3
CAPN1-220ENST00000530567 TSG101Q99816 390 aa23.15■■□□□ 1.3
CAPN1-220ENST00000530567 PLVAPQ9BX97 442 aa23.15■■□□□ 1.3
CAPN1-220ENST00000530567 GOLGA2P5Q9HBQ8 144 aa23.15■■□□□ 1.3
CAPN1-220ENST00000530567 PDE11AQ9HCR9 933 aa23.15■■□□□ 1.3
CAPN1-220ENST00000530567 DERAQ9Y315 318 aa23.15■■□□□ 1.3
CAPN1-220ENST00000530567 C2CD2Q9Y426 696 aa23.15■■□□□ 1.3
CAPN1-220ENST00000530567 CASTOR2A6NHX0 329 aa23.14■■□□□ 1.29
CAPN1-220ENST00000530567 F8W810 466 aa23.14■■□□□ 1.29
CAPN1-220ENST00000530567 RPL13P26373 211 aaKnown RBP23.14■■□□□ 1.29
CAPN1-220ENST00000530567 STX17P56962 302 aa23.14■■□□□ 1.29
CAPN1-220ENST00000530567 ZNF697Q5TEC3 545 aa23.14■■□□□ 1.29
CAPN1-220ENST00000530567 CEP135Q66GS9 1140 aa23.14■■□□□ 1.29
CAPN1-220ENST00000530567 FAM84AQ96KN4 292 aa23.14■■□□□ 1.29
CAPN1-220ENST00000530567 TSPAN18Q96SJ8 248 aa23.14■■□□□ 1.29
CAPN1-220ENST00000530567 AAASQ9NRG9 546 aa23.14■■□□□ 1.29
CAPN1-220ENST00000530567 SLC38A7Q9NVC3 462 aa23.14■■□□□ 1.29
CAPN1-220ENST00000530567 MARCH5Q9NX47 278 aa23.14■■□□□ 1.29
CAPN1-220ENST00000530567 MYO9BQ13459 2157 aa23.14■■□□□ 1.29
CAPN1-220ENST00000530567 PTPRJQ12913 1337 aa23.13■■□□□ 1.29
CAPN1-220ENST00000530567 PLXNA4Q9HCM2 1894 aa23.13■■□□□ 1.29
CAPN1-220ENST00000530567 NT5C1B-RDH14C9J2C7 533 aa23.13■■□□□ 1.29
CAPN1-220ENST00000530567 NRP1O14786 923 aa23.13■■□□□ 1.29
CAPN1-220ENST00000530567 RB1P06400 928 aa23.13■■□□□ 1.29
CAPN1-220ENST00000530567 GUCY2FP51841 1108 aa23.13■■□□□ 1.29
CAPN1-220ENST00000530567 FKBP3Q00688 224 aaKnown RBP23.13■■□□□ 1.29
CAPN1-220ENST00000530567 ADAM9Q13443 819 aa23.13■■□□□ 1.29
CAPN1-220ENST00000530567 TMEM132DQ14C87 1099 aa23.13■■□□□ 1.29
CAPN1-220ENST00000530567 PSMD6Q15008 389 aa23.13■■□□□ 1.29
CAPN1-220ENST00000530567 SKOR2Q2VWA4 1001 aaPredicted RBP23.13■■□□□ 1.29
CAPN1-220ENST00000530567 KLHL23Q8NBE8 558 aa23.13■■□□□ 1.29
CAPN1-220ENST00000530567 FBXO22Q8NEZ5 403 aa23.13■■□□□ 1.29
CAPN1-220ENST00000530567 RABGGTAQ92696 567 aa23.13■■□□□ 1.29
CAPN1-220ENST00000530567 RWDD2AQ9UIY3 292 aa23.13■■□□□ 1.29
CAPN1-220ENST00000530567 PRG3Q9Y2Y8 225 aaPredicted RBP23.13■■□□□ 1.29
CAPN1-220ENST00000530567 PCDHB12Q9Y5F1 795 aa23.13■■□□□ 1.29
CAPN1-220ENST00000530567 IGFBP6P24592 240 aaPredicted RBP23.12■■□□□ 1.29
CAPN1-220ENST00000530567 OR1G1P47890 313 aa23.12■■□□□ 1.29
CAPN1-220ENST00000530567 ALDH7A1P49419 539 aaKnown RBP23.12■■□□□ 1.29
CAPN1-220ENST00000530567 HSP90AA2PQ14568 343 aaPredicted RBP23.12■■□□□ 1.29
CAPN1-220ENST00000530567 GRIN2CQ14957 1233 aa23.12■■□□□ 1.29
CAPN1-220ENST00000530567 SPATA1Q5VX52 437 aa23.12■■□□□ 1.29
CAPN1-220ENST00000530567 Q7L0L9 218 aa23.12■■□□□ 1.29
CAPN1-220ENST00000530567 UBQLN1Q9UMX0 589 aaKnown RBP23.12■■□□□ 1.29
CAPN1-220ENST00000530567 BICDL2A1A5D9 508 aa23.11■■□□□ 1.29
CAPN1-220ENST00000530567 MAPK13O15264 365 aa23.11■■□□□ 1.29
CAPN1-220ENST00000530567 ITGB1P05556 798 aa23.11■■□□□ 1.29
CAPN1-220ENST00000530567 CYP3A5P20815 502 aa23.11■■□□□ 1.29
CAPN1-220ENST00000530567 PPM1AP35813 382 aa23.11■■□□□ 1.29
CAPN1-220ENST00000530567 SASS6Q6UVJ0 657 aa23.11■■□□□ 1.29
CAPN1-220ENST00000530567 GDPD5Q8WTR4 605 aa23.11■■□□□ 1.29
CAPN1-220ENST00000530567 BORCS6Q96GS4 357 aa23.11■■□□□ 1.29
CAPN1-220ENST00000530567 IGSF21Q96ID5 467 aa23.11■■□□□ 1.29
CAPN1-220ENST00000530567 MKNK1Q9BUB5 465 aa23.11■■□□□ 1.29
CAPN1-220ENST00000530567 SPG21Q9NZD8 308 aa23.11■■□□□ 1.29
CAPN1-220ENST00000530567 FRMD4BQ9Y2L6 1034 aa23.11■■□□□ 1.29
CAPN1-220ENST00000530567 FAN1Q9Y2M0 1017 aa23.11■■□□□ 1.29
CAPN1-220ENST00000530567 TRANK1O15050 2925 aa23.11■■□□□ 1.29
CAPN1-220ENST00000530567 H3BNC9 293 aa23.1■■□□□ 1.29
CAPN1-220ENST00000530567 RFXAPO00287 272 aa23.1■■□□□ 1.29
CAPN1-220ENST00000530567 CETN3O15182 167 aa23.1■■□□□ 1.29
CAPN1-220ENST00000530567 LPXNO60711 386 aa23.1■■□□□ 1.29
CAPN1-220ENST00000530567 FGF18O76093 207 aa23.1■■□□□ 1.29
CAPN1-220ENST00000530567 KIF4AO95239 1232 aa23.1■■□□□ 1.29
CAPN1-220ENST00000530567 ALDH2P05091 517 aa23.1■■□□□ 1.29
CAPN1-220ENST00000530567 LRPAP1P30533 357 aa23.1■■□□□ 1.29
CAPN1-220ENST00000530567 CLCNKBP51801 687 aa23.1■■□□□ 1.29
CAPN1-220ENST00000530567 UPP1Q16831 310 aa23.1■■□□□ 1.29
CAPN1-220ENST00000530567 LMBRD2Q68DH5 695 aaPredicted RBP23.1■■□□□ 1.29
CAPN1-220ENST00000530567 CD300LGQ6UXG3 332 aa23.1■■□□□ 1.29
CAPN1-220ENST00000530567 NT5DC4Q86YG4 428 aa23.1■■□□□ 1.29
CAPN1-220ENST00000530567 FAM186BQ8IYM0 893 aa23.1■■□□□ 1.29
CAPN1-220ENST00000530567 CCDC127Q96BQ5 260 aa23.1■■□□□ 1.29
CAPN1-220ENST00000530567 FAM161BQ96MY7 647 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms