RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 FHL2Q14192 279 aa5.92□□□□□ -1.46
C11orf88-204ENST00000529661 CSRP2Q16527 193 aa5.92□□□□□ -1.46
C11orf88-204ENST00000529661 DGKHQ86XP1 1220 aa5.92□□□□□ -1.46
C11orf88-204ENST00000529661 STON2Q8WXE9 905 aa5.92□□□□□ -1.46
C11orf88-204ENST00000529661 ARNT2Q9HBZ2 717 aa5.92□□□□□ -1.46
C11orf88-204ENST00000529661 ANLNQ9NQW6 1124 aa5.92□□□□□ -1.46
C11orf88-204ENST00000529661 OBP2AQ9NY56 170 aa5.92□□□□□ -1.46
C11orf88-204ENST00000529661 TRPM5Q9NZQ8 1165 aa5.92□□□□□ -1.46
C11orf88-204ENST00000529661 ENDOD1O94919 500 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 IL33O95760 270 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 KRT18P05783 430 aaKnown RBP5.91□□□□□ -1.46
C11orf88-204ENST00000529661 RAP2AP10114 183 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 ALOX15P16050 662 aaPredicted RBP5.91□□□□□ -1.46
C11orf88-204ENST00000529661 PTGS2P35354 604 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 SREBF1P36956 1147 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 ADKP55263 362 aaKnown RBP5.91□□□□□ -1.46
C11orf88-204ENST00000529661 RAP2BP61225 183 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 NHLH2Q02577 135 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 MGAT2Q10469 447 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 BMT2Q1RMZ1 405 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 FAM47AQ5JRC9 791 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 B3GNT9Q6UX72 402 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 ZNF572Q7Z3I7 529 aaPredicted RBP5.91□□□□□ -1.46
C11orf88-204ENST00000529661 SYT12Q8IV01 421 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 SYNE4Q8N205 404 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 ZFP28Q8NHY6 868 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 SLC35G2Q8TBE7 412 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 HOXB13Q92826 284 aaPredicted RBP5.91□□□□□ -1.46
C11orf88-204ENST00000529661 HAS1Q92839 578 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 PHACTR3Q96KR7 559 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 PCED1AQ9H1Q7 454 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 ZNF768Q9H5H4 540 aaKnown RBP5.91□□□□□ -1.46
C11orf88-204ENST00000529661 LANCL2Q9NS86 450 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 GPRC5BQ9NZH0 403 aa5.91□□□□□ -1.46
C11orf88-204ENST00000529661 VSTM5A8MXK1 200 aa5.9□□□□□ -1.46
C11orf88-204ENST00000529661 CXorf49A8MYA2 514 aaPredicted RBP5.9□□□□□ -1.46
C11orf88-204ENST00000529661 AHRRA9YTQ3 701 aa5.9□□□□□ -1.46
C11orf88-204ENST00000529661 WNT10BO00744 389 aa5.9□□□□□ -1.46
C11orf88-204ENST00000529661 NDUFS2O75306 463 aa5.9□□□□□ -1.46
C11orf88-204ENST00000529661 POU2F2P09086 479 aa5.9□□□□□ -1.46
C11orf88-204ENST00000529661 MGAT1P26572 445 aa5.9□□□□□ -1.46
C11orf88-204ENST00000529661 HMGA2P52926 109 aa5.9□□□□□ -1.46
C11orf88-204ENST00000529661 CLRN1P58418 232 aa5.9□□□□□ -1.46
C11orf88-204ENST00000529661 RNASE9P60153 205 aaKnown RBP5.9□□□□□ -1.46
C11orf88-204ENST00000529661 SEPT2Q15019 361 aa5.9□□□□□ -1.46
C11orf88-204ENST00000529661 ATXN7L2Q5T6C5 722 aaPredicted RBP5.9□□□□□ -1.46
C11orf88-204ENST00000529661 AFMIDQ63HM1 303 aa5.9□□□□□ -1.46
C11orf88-204ENST00000529661 DRICH1Q6PGQ1 229 aaPredicted RBP5.9□□□□□ -1.46
C11orf88-204ENST00000529661 GDF7Q7Z4P5 450 aa5.9□□□□□ -1.46
C11orf88-204ENST00000529661 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.9□□□□□ -1.46
C11orf88-204ENST00000529661 DPF2Q92785 391 aa5.9□□□□□ -1.46
C11orf88-204ENST00000529661 MRIQ9BWK5 157 aa5.9□□□□□ -1.46
C11orf88-204ENST00000529661 SLC12A5Q9H2X9 1139 aa5.9□□□□□ -1.46
C11orf88-204ENST00000529661 TUBD1Q9UJT1 453 aa5.9□□□□□ -1.46
C11orf88-204ENST00000529661 AJAP1Q9UKB5 411 aaPredicted RBP5.9□□□□□ -1.46
C11orf88-204ENST00000529661 INTUQ9ULD6 942 aa5.9□□□□□ -1.46
C11orf88-204ENST00000529661 FAM171A2A8MVW0 826 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 ERC2O15083 957 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 SNRPA1P09661 255 aaKnown RBP5.89□□□□□ -1.47
C11orf88-204ENST00000529661 IL2RBP14784 551 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 NR4A1P22736 598 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 ALDH1A3P47895 512 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 FAM189BP81408 668 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 SP140Q13342 867 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 GBX1Q14549 363 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 ATAT1Q5SQI0 421 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 OR2I1PQ8NGU4 316 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 CCHCR1Q8TD31 782 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 NRG4Q8WWG1 115 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 LARP4BQ92615 738 aaKnown RBP5.89□□□□□ -1.47
C11orf88-204ENST00000529661 COA7Q96BR5 231 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 DCLRE1CQ96SD1 692 aaKnown RBP5.89□□□□□ -1.47
C11orf88-204ENST00000529661 MRI1Q9BV20 369 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 PRDM11Q9NQV5 511 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 TMEM140Q9NV12 185 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 MOCS1Q9NZB8 636 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 SIK3Q9Y2K2 1263 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 ATRNL1Q5VV63 1379 aa5.89□□□□□ -1.47
C11orf88-204ENST00000529661 PJA2O43164 708 aa5.88□□□□□ -1.47
C11orf88-204ENST00000529661 AP1G1O43747 822 aa5.88□□□□□ -1.47
C11orf88-204ENST00000529661 MYL1P05976 194 aa5.88□□□□□ -1.47
C11orf88-204ENST00000529661 HSPA6P17066 643 aa5.88□□□□□ -1.47
C11orf88-204ENST00000529661 ATP5JP18859 108 aa5.88□□□□□ -1.47
C11orf88-204ENST00000529661 FPR1P21462 350 aa5.88□□□□□ -1.47
C11orf88-204ENST00000529661 CHN2P52757 468 aa5.88□□□□□ -1.47
C11orf88-204ENST00000529661 UBE4AQ14139 1066 aa5.88□□□□□ -1.47
C11orf88-204ENST00000529661 CYB5RLQ6IPT4 315 aa5.88□□□□□ -1.47
C11orf88-204ENST00000529661 MIER2Q8N344 545 aa5.88□□□□□ -1.47
C11orf88-204ENST00000529661 PRR18Q8N4B5 295 aa5.88□□□□□ -1.47
C11orf88-204ENST00000529661 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.88□□□□□ -1.47
C11orf88-204ENST00000529661 RUNDC1Q96C34 613 aa5.88□□□□□ -1.47
C11orf88-204ENST00000529661 C7orf25Q9BPX7 421 aa5.88□□□□□ -1.47
C11orf88-204ENST00000529661 SLC46A2Q9BY10 475 aa5.88□□□□□ -1.47
C11orf88-204ENST00000529661 TEX101Q9BY14 249 aa5.88□□□□□ -1.47
C11orf88-204ENST00000529661 SAP30BPQ9UHR5 308 aaKnown RBP5.88□□□□□ -1.47
C11orf88-204ENST00000529661 RUVBL1Q9Y265 456 aaKnown RBP5.88□□□□□ -1.47
C11orf88-204ENST00000529661 ZNF185O15231 689 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 GPR32O75388 356 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 NCR1O76036 304 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 LAG3P18627 525 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms