RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 ARL2P36404 184 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 ZNF445P59923 1031 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 KCNC4Q03721 635 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 SNW1Q13573 536 aaKnown RBP9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 NAB2Q15742 525 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 NCAPH2Q6IBW4 605 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 PPP4R3AQ6IN85 833 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 NOTUMQ6P988 496 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 DGLUCYQ7Z3D6 616 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 CNNM3Q8NE01 707 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 ITFG1Q8TB96 612 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 LNX1Q8TBB1 728 aaPredicted RBP9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 NXPE3Q969Y0 559 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 FAM20AQ96MK3 541 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 LLPHQ9BRT6 129 aaKnown RBP9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 DDX23Q9BUQ8 820 aaKnown RBP9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 PHF20Q9BVI0 1012 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 COLEC11Q9BWP8 271 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 SEMA4AQ9H3S1 761 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 PLEKHA4Q9H4M7 779 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 UBN1Q9NPG3 1134 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 HCFC1R1Q9NWW0 138 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 ZDHHC7Q9NXF8 308 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 FNIP2Q9P278 1114 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 FBXW11Q9UKB1 542 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 ADAM28Q9UKQ2 775 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 SSX2IPQ9Y2D8 614 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 USP20Q9Y2K6 914 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 TRIP11Q15643 1979 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 OTOGLQ3ZCN5 2332 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 EP300Q09472 2414 aaPredicted RBP9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 NRG2O14511 850 aaPredicted RBP9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 PTGESO14684 152 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 ASAP2O43150 1006 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 CCNT1O60563 726 aaKnown RBP9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 KIF4AO95239 1232 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 LARGE1O95461 756 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 F13A1P00488 732 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 RFX1P22670 979 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 FSHRP23945 695 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 AXLP30530 894 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 USP41Q3LFD5 358 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 RSPO2Q6UXX9 243 aaPredicted RBP9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 PIK3AP1Q6ZUJ8 805 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 KRT25Q7Z3Z0 450 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 NEK8Q86SG6 692 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 TPH2Q8IWU9 490 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 TRIM22Q8IYM9 498 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 TCP11Q8WWU5 503 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 RUBCNQ92622 972 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 FGF13Q92913 245 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 SYAP1Q96A49 352 aaPredicted RBP9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 PLA2G2FQ9BZM2 168 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 GPRC5CQ9NQ84 441 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 GIT1Q9Y2X7 761 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 KIF3AQ9Y496 699 aa9.45□□□□□ -0.9
TGFBR3-208ENST00000529608 A0A1B0GUA9 196 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 KANSL1LA0AUZ9 987 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 CASTOR2A6NHX0 329 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 CCL16O15467 120 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 KRT37O76014 449 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 CTDNEP1O95476 244 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 C1RP00736 705 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 C8AP07357 584 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 SCRN1Q12765 414 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 GRIK3Q13003 919 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 NR5A1Q13285 461 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 FZD5Q13467 585 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 HSP90AA2PQ14568 343 aaPredicted RBP9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 PUM1Q14671 1186 aaKnown RBP eCLIP9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 RSPO4Q2I0M5 234 aaPredicted RBP9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 LARP1BQ659C4 914 aaKnown RBP9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 TSSK4Q6SA08 328 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 NECAB1Q8N987 351 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 PIGOQ8TEQ8 1089 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 GTF3C6Q969F1 213 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 CCDC51Q96ER9 411 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 ZNF274Q96GC6 653 aaPredicted RBP9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 CNTNAP3BQ96NU0 1288 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 HSD17B14Q9BPX1 270 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 HINFPQ9BQA5 517 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 KXD1Q9BQD3 176 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 EIF2AK1Q9BQI3 630 aaKnown RBP9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 PRR14Q9BWN1 585 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 CNTNAP3Q9BZ76 1288 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 ZSWIM4Q9H7M6 989 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 GRPEL1Q9HAV7 217 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 IL21Q9HBE4 155 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 DNMT3BQ9UBC3 853 aaKnown RBP9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 PARP2Q9UGN5 583 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 DPP7Q9UHL4 492 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 CDH7Q9ULB5 785 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 MTMR6Q9Y217 621 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 PPME1Q9Y570 386 aa9.44□□□□□ -0.9
TGFBR3-208ENST00000529608 ZFHX4Q86UP3 3567 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 TICRRQ7Z2Z1 1910 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 CCDC194A0A1B0GVG4 234 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 TBX3O15119 743 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms