RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 BACE2Q9Y5Z0 518 aa17.15■□□□□ 0.34
CTSB-215ENST00000528965 CDY1Q9Y6F8 540 aa17.15■□□□□ 0.34
CTSB-215ENST00000528965 PTPRZ1P23471 2315 aaPredicted RBP17.15■□□□□ 0.34
CTSB-215ENST00000528965 SMIM28A0A1B0GU29 152 aa17.14■□□□□ 0.33
CTSB-215ENST00000528965 SEC24BO95487 1268 aa17.14■□□□□ 0.33
CTSB-215ENST00000528965 MCF2P10911 925 aa17.14■□□□□ 0.33
CTSB-215ENST00000528965 NPTX2P47972 431 aa17.14■□□□□ 0.33
CTSB-215ENST00000528965 PFKPQ01813 784 aa17.14■□□□□ 0.33
CTSB-215ENST00000528965 UPP1Q16831 310 aa17.14■□□□□ 0.33
CTSB-215ENST00000528965 PABPC1LQ4VXU2 614 aaKnown RBP17.14■□□□□ 0.33
CTSB-215ENST00000528965 ZC3H14Q6PJT7 736 aaKnown RBP17.14■□□□□ 0.33
CTSB-215ENST00000528965 DTHD1Q6ZMT9 781 aa17.14■□□□□ 0.33
CTSB-215ENST00000528965 FGF13Q92913 245 aa17.14■□□□□ 0.33
CTSB-215ENST00000528965 ACO2Q99798 780 aaKnown RBP17.14■□□□□ 0.33
CTSB-215ENST00000528965 TCHPQ9BT92 498 aa17.14■□□□□ 0.33
CTSB-215ENST00000528965 CXCL16Q9H2A7 254 aa17.14■□□□□ 0.33
CTSB-215ENST00000528965 SEMA4AQ9H3S1 761 aa17.14■□□□□ 0.33
CTSB-215ENST00000528965 ARHGAP28Q9P2N2 729 aa17.14■□□□□ 0.33
CTSB-215ENST00000528965 KCNG1Q9UIX4 513 aa17.14■□□□□ 0.33
CTSB-215ENST00000528965 SIT1Q9Y3P8 196 aa17.14■□□□□ 0.33
CTSB-215ENST00000528965 USP34Q70CQ2 3546 aa17.14■□□□□ 0.33
CTSB-215ENST00000528965 FAM186AA6NE01 2351 aa17.14■□□□□ 0.33
CTSB-215ENST00000528965 RIF1Q5UIP0 2472 aaKnown RBP17.13■□□□□ 0.33
CTSB-215ENST00000528965 ADAM12O43184 909 aa17.13■□□□□ 0.33
CTSB-215ENST00000528965 HIP1RO75146 1068 aa17.13■□□□□ 0.33
CTSB-215ENST00000528965 TKTP29401 623 aaKnown RBP17.13■□□□□ 0.33
CTSB-215ENST00000528965 NTHL1P78549 312 aa17.13■□□□□ 0.33
CTSB-215ENST00000528965 STRN3Q13033 797 aa17.13■□□□□ 0.33
CTSB-215ENST00000528965 FGF14Q92915 247 aa17.13■□□□□ 0.33
CTSB-215ENST00000528965 SNX27Q96L92 541 aa17.13■□□□□ 0.33
CTSB-215ENST00000528965 ACAP3Q96P50 834 aa17.13■□□□□ 0.33
CTSB-215ENST00000528965 POLD4Q9HCU8 107 aa17.13■□□□□ 0.33
CTSB-215ENST00000528965 NUB1Q9Y5A7 615 aa17.13■□□□□ 0.33
CTSB-215ENST00000528965 PCDHB6Q9Y5E3 794 aa17.13■□□□□ 0.33
CTSB-215ENST00000528965 E9PMD0 336 aa17.12■□□□□ 0.33
CTSB-215ENST00000528965 H7C4K7 107 aa17.12■□□□□ 0.33
CTSB-215ENST00000528965 PODXLO00592 558 aa17.12■□□□□ 0.33
CTSB-215ENST00000528965 SYN3O14994 580 aa17.12■□□□□ 0.33
CTSB-215ENST00000528965 LRG1P02750 347 aa17.12■□□□□ 0.33
CTSB-215ENST00000528965 ELF1P32519 619 aa17.12■□□□□ 0.33
CTSB-215ENST00000528965 OSTNP61366 133 aa17.12■□□□□ 0.33
CTSB-215ENST00000528965 PRKCQQ04759 706 aa17.12■□□□□ 0.33
CTSB-215ENST00000528965 XKR4Q5GH76 650 aa17.12■□□□□ 0.33
CTSB-215ENST00000528965 SPECC1Q5M775 1068 aa17.12■□□□□ 0.33
CTSB-215ENST00000528965 PARM1Q6UWI2 310 aa17.12■□□□□ 0.33
CTSB-215ENST00000528965 MPZL3Q6UWV2 235 aa17.12■□□□□ 0.33
CTSB-215ENST00000528965 KCTD17Q8N5Z5 321 aa17.12■□□□□ 0.33
CTSB-215ENST00000528965 TARS2Q9BW92 718 aaKnown RBP17.12■□□□□ 0.33
CTSB-215ENST00000528965 GOLGA2P5Q9HBQ8 144 aa17.12■□□□□ 0.33
CTSB-215ENST00000528965 MRPS23Q9Y3D9 190 aaKnown RBP17.12■□□□□ 0.33
CTSB-215ENST00000528965 PRRG1O14668 218 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 KCNE1P15382 129 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 GUCY2CP25092 1073 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 RPL9P32969 192 aaKnown RBP17.11■□□□□ 0.33
CTSB-215ENST00000528965 BRCC3P46736 316 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 SMTNP53814 917 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 FOXK2Q01167 660 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 RILPL1Q5EBL4 403 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 SLC8B1Q6J4K2 584 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 RINT1Q6NUQ1 792 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 NPAS3Q8IXF0 933 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 DAW1Q8N136 415 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 ADSSL1Q8N142 457 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 CEP120Q8N960 986 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 C3orf58Q8NDZ4 430 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 PJA1Q8NG27 643 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 ITFG1Q8TB96 612 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 KCNG4Q8TDN1 519 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 CDK5RAP3Q96JB5 506 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 RUSC1Q9BVN2 902 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 PTPRHQ9HD43 1115 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 GDE1Q9NZC3 331 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 CNTN3Q9P232 1028 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.11■□□□□ 0.33
CTSB-215ENST00000528965 VWA8A3KMH1 1905 aa17.11■□□□□ 0.33
CTSB-215ENST00000528965 PP2D1A8MPX8 630 aa17.1■□□□□ 0.33
CTSB-215ENST00000528965 I3L4J1 428 aa17.1■□□□□ 0.33
CTSB-215ENST00000528965 DCNP07585 359 aaKnown RBP17.1■□□□□ 0.33
CTSB-215ENST00000528965 HARSP12081 509 aaKnown RBP17.1■□□□□ 0.33
CTSB-215ENST00000528965 TOB1P50616 345 aaPredicted RBP17.1■□□□□ 0.33
CTSB-215ENST00000528965 STARD6P59095 220 aa17.1■□□□□ 0.33
CTSB-215ENST00000528965 GPC5P78333 572 aa17.1■□□□□ 0.33
CTSB-215ENST00000528965 ROR1Q01973 937 aa17.1■□□□□ 0.33
CTSB-215ENST00000528965 NOLC1Q14978 699 aaKnown RBP eCLIP17.1■□□□□ 0.33
CTSB-215ENST00000528965 ZRSR1Q15695 479 aaKnown RBP17.1■□□□□ 0.33
CTSB-215ENST00000528965 MLF2Q15773 248 aaPredicted RBP17.1■□□□□ 0.33
CTSB-215ENST00000528965 VARS2Q5ST30 1063 aaKnown RBP17.1■□□□□ 0.33
CTSB-215ENST00000528965 MCTP1Q6DN14 999 aa17.1■□□□□ 0.33
CTSB-215ENST00000528965 ALKAL1Q6UXT8 129 aa17.1■□□□□ 0.33
CTSB-215ENST00000528965 C1orf186Q6ZWK4 172 aa17.1■□□□□ 0.33
CTSB-215ENST00000528965 C1orf210Q8IVY1 113 aa17.1■□□□□ 0.33
CTSB-215ENST00000528965 ZNF461Q8TAF7 563 aa17.1■□□□□ 0.33
CTSB-215ENST00000528965 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.1■□□□□ 0.33
CTSB-215ENST00000528965 HCFC1R1Q9NWW0 138 aa17.1■□□□□ 0.33
CTSB-215ENST00000528965 KCND2Q9NZV8 630 aa17.1■□□□□ 0.33
CTSB-215ENST00000528965 ANKFY1Q9P2R3 1169 aa17.1■□□□□ 0.33
CTSB-215ENST00000528965 DNMT3BQ9UBC3 853 aaKnown RBP17.1■□□□□ 0.33
CTSB-215ENST00000528965 KANSL1LA0AUZ9 987 aa17.09■□□□□ 0.33
CTSB-215ENST00000528965 ARHGEF37A1IGU5 675 aa17.09■□□□□ 0.33
CTSB-215ENST00000528965 H0YCG3 227 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms