RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 PPP2R3AQ06190 1150 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 DCAF17Q5H9S7 520 aaPredicted RBP13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 GLRA4Q5JXX5 417 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 LMBRD2Q68DH5 695 aaPredicted RBP13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 JADE1Q6IE81 842 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TMCO2Q7Z6W1 182 aaPredicted RBP13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 NPAS4Q8IUM7 802 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 EFCAB13Q8IY85 973 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 ZNF516Q92618 1163 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 ASB7Q9H672 318 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 MIOSQ9NXC5 875 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 CNTN3Q9P232 1028 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 PLAGL2Q9UPG8 496 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 CITO14578 2027 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 SMIM28A0A1B0GU29 152 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 A0A1W2PPC1 479 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 ZBBXA8MT70 800 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 AP5Z1O43299 807 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 UPP2O95045 317 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 AMHP03971 560 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 KCNE1P15382 129 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 GATMP50440 423 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 COPB1P53618 953 aaKnown RBP13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 ENPEPQ07075 957 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 PPP3CAQ08209 521 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 SURF1Q15526 300 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 MAN2A1Q16706 1144 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 MIIPQ5JXC2 388 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TCERG1LQ5VWI1 586 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 CD302Q8IX05 232 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TMEM130Q8N3G9 435 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 OR5B17Q8NGF7 314 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 HELQQ8TDG4 1101 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 HERVK_113Q902F9 699 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TOP1MTQ969P6 601 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 RNPC3Q96LT9 517 aaKnown RBP13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 FNBP1Q96RU3 617 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 CGRRF1Q99675 332 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 VPS16Q9H269 839 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 UBN1Q9NPG3 1134 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 LRFN2Q9ULH4 789 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 REV3LO60673 3130 aa13.17□□□□□ -0.3
TRAF3IP2-211ENST00000528599 RALGAPA2Q2PPJ7 1873 aa13.16□□□□□ -0.3
TRAF3IP2-211ENST00000528599 INPPL1O15357 1258 aa13.16□□□□□ -0.3
TRAF3IP2-211ENST00000528599 PRKCSHP14314 528 aaPredicted RBP13.16□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TNNI1P19237 187 aa13.16□□□□□ -0.3
TRAF3IP2-211ENST00000528599 SCNN1GP51170 649 aa13.16□□□□□ -0.3
TRAF3IP2-211ENST00000528599 FANCCQ00597 558 aa13.16□□□□□ -0.3
TRAF3IP2-211ENST00000528599 KCNH2Q12809 1159 aa13.16□□□□□ -0.3
TRAF3IP2-211ENST00000528599 ZBTB6Q15916 424 aa13.16□□□□□ -0.3
TRAF3IP2-211ENST00000528599 WDR49Q8IV35 697 aa13.16□□□□□ -0.3
TRAF3IP2-211ENST00000528599 LRCH3Q96II8 777 aa13.16□□□□□ -0.3
TRAF3IP2-211ENST00000528599 PDLIM2Q96JY6 352 aa13.16□□□□□ -0.3
TRAF3IP2-211ENST00000528599 NAP1L5Q96NT1 182 aaPredicted RBP13.16□□□□□ -0.3
TRAF3IP2-211ENST00000528599 INTS13Q9NVM9 706 aa13.16□□□□□ -0.3
TRAF3IP2-211ENST00000528599 INPP5FQ9Y2H2 1132 aa13.16□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TRIP11Q15643 1979 aa13.16□□□□□ -0.3
TRAF3IP2-211ENST00000528599 GBF1Q92538 1859 aa13.16□□□□□ -0.3
TRAF3IP2-211ENST00000528599 PRUNE2Q8WUY3 3088 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 GRXCR1A8MXD5 290 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 KCNJ6P48051 423 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 GCLMP48507 274 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 FXR1P51114 621 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TFAMQ00059 246 aaKnown RBP13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TMEM132DQ14C87 1099 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 NAB2Q15742 525 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 LRIT3Q3SXY7 679 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 CBWD6Q4V339 395 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 VWA3BQ502W6 1294 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 HS1BP3Q53T59 392 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 CBWD3Q5JTY5 395 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 CBWD5Q5RIA9 395 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 SCARA3Q6AZY7 606 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 GLB1LQ6UWU2 654 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 USP37Q86T82 979 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 ANKRD20A12PQ8NF67 263 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 C18orf25Q96B23 403 aaPredicted RBP13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 KIF12Q96FN5 646 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 CASD1Q96PB1 797 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 PPP1R10Q96QC0 940 aaKnown RBP13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 RPS6KC1Q96S38 1066 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 NDST4Q9H3R1 872 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 MMRN2Q9H8L6 949 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 DERAQ9Y315 318 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 C2CD2Q9Y426 696 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 XIRP2A4UGR9 3374 aa13.15□□□□□ -0.3
TRAF3IP2-211ENST00000528599 DGKIO75912 1065 aa13.15□□□□□ -0.31
TRAF3IP2-211ENST00000528599 SERPINC1P01008 464 aa13.15□□□□□ -0.31
TRAF3IP2-211ENST00000528599 POMCP01189 267 aa13.15□□□□□ -0.31
TRAF3IP2-211ENST00000528599 AFPP02771 609 aaKnown RBP13.15□□□□□ -0.31
TRAF3IP2-211ENST00000528599 C4BPAP04003 597 aaKnown RBP13.15□□□□□ -0.31
TRAF3IP2-211ENST00000528599 GUCY2FP51841 1108 aa13.15□□□□□ -0.31
TRAF3IP2-211ENST00000528599 DUOXA2Q1HG44 320 aa13.15□□□□□ -0.31
TRAF3IP2-211ENST00000528599 NOMO2Q5JPE7 1267 aa13.15□□□□□ -0.31
TRAF3IP2-211ENST00000528599 FAM117BQ6P1L5 589 aa13.15□□□□□ -0.31
TRAF3IP2-211ENST00000528599 C15orf39Q6ZRI6 1047 aa13.15□□□□□ -0.31
TRAF3IP2-211ENST00000528599 SV2AQ7L0J3 742 aa13.15□□□□□ -0.31
TRAF3IP2-211ENST00000528599 MTMR12Q9C0I1 747 aa13.15□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TMEM117Q9H0C3 514 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms