RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 KCNH2Q12809 1159 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 TMEM132DQ14C87 1099 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 VWA3BQ502W6 1294 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 TCERG1LQ5VWI1 586 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 JADE1Q6IE81 842 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 SARM1Q6SZW1 724 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 PHOSPHO2Q8TCD6 241 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 RPS6KC1Q96S38 1066 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 POP1Q99575 1024 aaKnown RBP23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 GDF15Q99988 308 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 CXCL16Q9H2A7 254 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 NDST4Q9H3R1 872 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 PTPRJQ12913 1337 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 TNRC18O15417 2968 aaPredicted RBP23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 P4HA2O15460 535 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 DGKIO75912 1065 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 AFPP02771 609 aaKnown RBP23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 TPM2P07951 284 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 NFICP08651 508 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 TRIM49P0CI25 452 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 TRIM49CP0CI26 452 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 FGFR1P11362 822 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 CYP3A5P20815 502 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 COPB1P53618 953 aaKnown RBP23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 FANCCQ00597 558 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 PPP3CAQ08209 521 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 C15orf39Q6ZRI6 1047 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 CACTINQ8WUQ7 758 aaKnown RBP23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 ZNF516Q92618 1163 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 TMEM117Q9H0C3 514 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 SLC38A7Q9NVC3 462 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 UBQLN1Q9UMX0 589 aaKnown RBP23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 XPOTO43592 962 aaKnown RBP23.81■■□□□ 1.4
PACSIN3-205ENST00000528462 THP07101 528 aa23.81■■□□□ 1.4
PACSIN3-205ENST00000528462 AFF1P51825 1210 aaKnown RBP23.81■■□□□ 1.4
PACSIN3-205ENST00000528462 GRIK3Q13003 919 aa23.81■■□□□ 1.4
PACSIN3-205ENST00000528462 NAB2Q15742 525 aa23.81■■□□□ 1.4
PACSIN3-205ENST00000528462 ZACNQ401N2 412 aa23.81■■□□□ 1.4
PACSIN3-205ENST00000528462 NOMO2Q5JPE7 1267 aa23.81■■□□□ 1.4
PACSIN3-205ENST00000528462 ABI1Q8IZP0 508 aa23.81■■□□□ 1.4
PACSIN3-205ENST00000528462 KIF12Q96FN5 646 aa23.81■■□□□ 1.4
PACSIN3-205ENST00000528462 CASD1Q96PB1 797 aa23.81■■□□□ 1.4
PACSIN3-205ENST00000528462 TMEM8AQ9HCN3 771 aa23.81■■□□□ 1.4
PACSIN3-205ENST00000528462 TAB2Q9NYJ8 693 aa23.81■■□□□ 1.4
PACSIN3-205ENST00000528462 CXXC1Q9P0U4 656 aaPredicted RBP23.81■■□□□ 1.4
PACSIN3-205ENST00000528462 TRIP11Q15643 1979 aa23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 A0A1B0GTH6 734 aa23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 LGALS16A8MUM7 142 aa23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 H0YGN5 161 aa23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 N4BP1O75113 896 aaKnown RBP23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 SERPINC1P01008 464 aa23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 C4BPAP04003 597 aaKnown RBP23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 FMO5P49326 533 aa23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 SV2AQ7L0J3 742 aa23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 OR5B17Q8NGF7 314 aa23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 URGCPQ8TCY9 931 aa23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 HELQQ8TDG4 1101 aa23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 ANKRD36BP1Q96IX9 119 aa23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 SLC9A7Q96T83 725 aa23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 RC3H2Q9HBD1 1191 aaKnown RBP23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 PLAGL2Q9UPG8 496 aa23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 COQ4Q9Y3A0 265 aa23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 SLC4A7Q9Y6M7 1214 aa23.8■■□□□ 1.4
PACSIN3-205ENST00000528462 GTPBP10A4D1E9 387 aaKnown RBP23.79■■□□□ 1.4
PACSIN3-205ENST00000528462 GOLGA6L3A6NEY3 463 aa23.79■■□□□ 1.4
PACSIN3-205ENST00000528462 ZBBXA8MT70 800 aa23.79■■□□□ 1.4
PACSIN3-205ENST00000528462 SCNN1GP51170 649 aa23.79■■□□□ 1.4
PACSIN3-205ENST00000528462 TFAMQ00059 246 aaKnown RBP23.79■■□□□ 1.4
PACSIN3-205ENST00000528462 GSE1Q14687 1217 aa23.79■■□□□ 1.4
PACSIN3-205ENST00000528462 KRT39Q6A163 491 aa23.79■■□□□ 1.4
PACSIN3-205ENST00000528462 ZNF689Q96CS4 500 aaPredicted RBP23.79■■□□□ 1.4
PACSIN3-205ENST00000528462 MRPL9Q9BYD2 267 aaKnown RBP23.79■■□□□ 1.4
PACSIN3-205ENST00000528462 MTMR12Q9C0I1 747 aa23.79■■□□□ 1.4
PACSIN3-205ENST00000528462 VPS16Q9H269 839 aa23.79■■□□□ 1.4
PACSIN3-205ENST00000528462 RTN4Q9NQC3 1192 aaKnown RBP23.79■■□□□ 1.4
PACSIN3-205ENST00000528462 MIOSQ9NXC5 875 aa23.79■■□□□ 1.4
PACSIN3-205ENST00000528462 GJB5O95377 273 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 TMEM191BP0C7N4 346 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 IBSPP21815 317 aaPredicted RBP23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 GCLMP48507 274 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 MXI1P50539 228 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 FILIP1LQ4L180 1135 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 CBWD6Q4V339 395 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 CBWD3Q5JTY5 395 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 GLRA4Q5JXX5 417 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 CBWD5Q5RIA9 395 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 TRAPPC11Q7Z392 1133 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 BEST2Q8NFU1 509 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 UPP2O95045 317 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 TNNC2P02585 160 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 UBASH3AP57075 661 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 TDRD10Q5VZ19 366 aaKnown RBP23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 LMBRD2Q68DH5 695 aaPredicted RBP23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 CXorf38Q8TB03 319 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 NAP1L5Q96NT1 182 aaPredicted RBP23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 TBC1D13Q9NVG8 400 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 ITGA11Q9UKX5 1188 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 INPP5FQ9Y2H2 1132 aa23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 PDCD11Q14690 1871 aaKnown RBP23.78■■□□□ 1.4
PACSIN3-205ENST00000528462 BMP8BP34820 402 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms