RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 PARM1Q6UWI2 310 aa17.05■□□□□ 0.32
CLNS1A-210ENST00000528364 DTHD1Q6ZMT9 781 aa17.05■□□□□ 0.32
CLNS1A-210ENST00000528364 FRMD5Q7Z6J6 570 aa17.05■□□□□ 0.32
CLNS1A-210ENST00000528364 TMEM130Q8N3G9 435 aa17.05■□□□□ 0.32
CLNS1A-210ENST00000528364 ITFG1Q8TB96 612 aa17.05■□□□□ 0.32
CLNS1A-210ENST00000528364 SLC7A14Q8TBB6 771 aa17.05■□□□□ 0.32
CLNS1A-210ENST00000528364 PNMA5Q96PV4 448 aa17.05■□□□□ 0.32
CLNS1A-210ENST00000528364 TMEM134Q9H6X4 195 aa17.05■□□□□ 0.32
CLNS1A-210ENST00000528364 KMT5AQ9NQR1 393 aa17.05■□□□□ 0.32
CLNS1A-210ENST00000528364 HCFC1R1Q9NWW0 138 aa17.05■□□□□ 0.32
CLNS1A-210ENST00000528364 ARHGAP28Q9P2N2 729 aa17.05■□□□□ 0.32
CLNS1A-210ENST00000528364 NUMBLQ9Y6R0 609 aa17.05■□□□□ 0.32
CLNS1A-210ENST00000528364 PROB1E7EW31 1015 aa17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 ABLIM1O14639 778 aa17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 HNRNPA1P09651 372 aaKnown RBP eCLIP17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 SRFP11831 508 aa17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 ZNF568Q3ZCX4 644 aa17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 SEZ6Q53EL9 994 aa17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 XKR4Q5GH76 650 aa17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 CCDC105Q8IYK2 499 aa17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 DTWD2Q8NBA8 298 aa17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 FGF14Q92915 247 aa17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 DDX27Q96GQ7 796 aaKnown RBP17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 RTP3Q9BQQ7 232 aa17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 TCHPQ9BT92 498 aa17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 MRPL4Q9BYD3 311 aaKnown RBP17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 RAB34Q9BZG1 259 aa17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 DNMT3BQ9UBC3 853 aaKnown RBP17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 MTRRQ9UBK8 725 aa17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 STK24Q9Y6E0 443 aa17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 CDY1Q9Y6F8 540 aa17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 NOTCH4Q99466 2003 aa17.04■□□□□ 0.32
CLNS1A-210ENST00000528364 NPHP3-ACAD11A0A0J9YXS1 232 aa17.03■□□□□ 0.32
CLNS1A-210ENST00000528364 TMEM189-UBE2V1I3L0A0 370 aa17.03■□□□□ 0.32
CLNS1A-210ENST00000528364 CD2BP2O95400 341 aaKnown RBP17.03■□□□□ 0.32
CLNS1A-210ENST00000528364 HARSP12081 509 aaKnown RBP17.03■□□□□ 0.32
CLNS1A-210ENST00000528364 PRPHP41219 470 aa17.03■□□□□ 0.32
CLNS1A-210ENST00000528364 NBL1P41271 181 aa17.03■□□□□ 0.32
CLNS1A-210ENST00000528364 YARSP54577 528 aaKnown RBP17.03■□□□□ 0.32
CLNS1A-210ENST00000528364 GPC5P78333 572 aa17.03■□□□□ 0.32
CLNS1A-210ENST00000528364 DMP1Q13316 513 aaPredicted RBP17.03■□□□□ 0.32
CLNS1A-210ENST00000528364 FGF13Q92913 245 aa17.03■□□□□ 0.32
CLNS1A-210ENST00000528364 NXPE3Q969Y0 559 aa17.03■□□□□ 0.32
CLNS1A-210ENST00000528364 C18orf25Q96B23 403 aaPredicted RBP17.03■□□□□ 0.32
CLNS1A-210ENST00000528364 CCDC94Q9BW85 323 aaPredicted RBP17.03■□□□□ 0.32
CLNS1A-210ENST00000528364 TBC1D17Q9HA65 648 aa17.03■□□□□ 0.32
CLNS1A-210ENST00000528364 CDH7Q9ULB5 785 aa17.03■□□□□ 0.32
CLNS1A-210ENST00000528364 PHLPP2Q6ZVD8 1323 aa17.02■□□□□ 0.32
CLNS1A-210ENST00000528364 LAD1O00515 517 aa17.02■□□□□ 0.32
CLNS1A-210ENST00000528364 PROZP22891 400 aa17.02■□□□□ 0.32
CLNS1A-210ENST00000528364 CACNB1Q02641 598 aaPredicted RBP17.02■□□□□ 0.32
CLNS1A-210ENST00000528364 ANGPT1Q15389 498 aa17.02■□□□□ 0.32
CLNS1A-210ENST00000528364 PDXDC1Q6P996 788 aa17.02■□□□□ 0.32
CLNS1A-210ENST00000528364 POTEHQ6S545 545 aa17.02■□□□□ 0.32
CLNS1A-210ENST00000528364 APBB1IPQ7Z5R6 666 aaPredicted RBP17.02■□□□□ 0.32
CLNS1A-210ENST00000528364 TMX3Q96JJ7 454 aa17.02■□□□□ 0.32
CLNS1A-210ENST00000528364 UROC1Q96N76 676 aa17.02■□□□□ 0.32
CLNS1A-210ENST00000528364 ACAP3Q96P50 834 aa17.02■□□□□ 0.32
CLNS1A-210ENST00000528364 RBM19Q9Y4C8 960 aaKnown RBP17.02■□□□□ 0.32
CLNS1A-210ENST00000528364 BACE2Q9Y5Z0 518 aa17.02■□□□□ 0.32
CLNS1A-210ENST00000528364 PRR23AA6NEV1 266 aa17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 PODXLO00592 558 aa17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 XYLBO75191 536 aa17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 DCNP07585 359 aaKnown RBP17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 MCF2P10911 925 aa17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 RFX1P22670 979 aa17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 ARPP19P56211 112 aa17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 ATP2C1P98194 919 aaPredicted RBP17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 RABEP1Q15276 862 aa17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 UVSSAQ2YD98 709 aa17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 SPECC1Q5M775 1068 aa17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 MPZL3Q6UWV2 235 aa17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 ING5Q8WYH8 240 aa17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 SNX27Q96L92 541 aa17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 DRC1Q96MC2 740 aa17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 NTPCRQ9BSD7 190 aaKnown RBP17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 TOPORSQ9NS56 1045 aaPredicted RBP17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 CACNA1IQ9P0X4 2223 aa17.01■□□□□ 0.31
CLNS1A-210ENST00000528364 VWA3AA6NCI4 1184 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 TRAPPC3O43617 180 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 LRRN2O75325 713 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 KCNE1P15382 129 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 GUCY2CP25092 1073 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 GJB2P29033 226 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 HOXA9P31269 272 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 SLC10A6Q3KNW5 377 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 RILPL1Q5EBL4 403 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 VARS2Q5ST30 1063 aaKnown RBP17■□□□□ 0.31
CLNS1A-210ENST00000528364 HYIQ5T013 277 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 ANKS3Q6ZW76 656 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 SYT2Q8N9I0 419 aaPredicted RBP17■□□□□ 0.31
CLNS1A-210ENST00000528364 TMEM161BQ8NDZ6 487 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 KXD1Q9BQD3 176 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 FOXQ1Q9C009 403 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 HAPLN2Q9GZV7 340 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 ARHGEF3Q9NR81 526 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 SLC2A4RGQ9NR83 387 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 ZFP37Q9Y6Q3 630 aaPredicted RBP17■□□□□ 0.31
CLNS1A-210ENST00000528364 USP34Q70CQ2 3546 aa17■□□□□ 0.31
CLNS1A-210ENST00000528364 SPTBN4Q9H254 2564 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms