RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 MSH4O15457 936 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 SKIP12755 728 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 TM4SF1P30408 202 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 CDR2Q01850 454 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 GABPAQ06546 454 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 PDCD2Q16342 344 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-214ENST00000528165 PDK4Q16654 411 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 PPP1R15BQ5SWA1 713 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 RNF220Q5VTB9 566 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 TPTE2Q6XPS3 522 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 C1orf186Q6ZWK4 172 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 TRABD2AQ86V40 505 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 TPH2Q8IWU9 490 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 BBOF1Q8ND07 529 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 ATL2Q8NHH9 583 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 C10orf82Q8WW14 230 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 FAM136AQ96C01 138 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 TRIM4Q9C037 500 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.6■□□□□ 0.09
CAPN1-214ENST00000528165 EURLQ9NYK6 297 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 VAV3Q9UKW4 847 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 EML1O00423 815 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 SPDYAQ5MJ70 313 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 MTHFD1LQ6UB35 978 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 ZNF365Q70YC5 407 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 CCDC125Q86Z20 511 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 UCMAQ8WVF2 138 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 SEL1LQ9UBV2 794 aa15.6■□□□□ 0.09
CAPN1-214ENST00000528165 HNRNPCL1O60812 293 aaKnown RBP15.59■□□□□ 0.09
CAPN1-214ENST00000528165 KRT15P19012 456 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 DLG4P78352 724 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 RCN2Q14257 317 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 ZRSR2Q15696 482 aaKnown RBP15.59■□□□□ 0.09
CAPN1-214ENST00000528165 KHDC1Q4VXA5 237 aaKnown RBP15.59■□□□□ 0.09
CAPN1-214ENST00000528165 ODR4Q5SWX8 454 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 DENND1AQ8TEH3 1009 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 SMC6Q96SB8 1091 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 DCLK3Q9C098 648 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 TRABDQ9H4I3 376 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 NOCTQ9UK39 431 aaKnown RBP15.59■□□□□ 0.09
CAPN1-214ENST00000528165 MROH7Q68CQ1 1323 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 PRPF4O43172 522 aaKnown RBP eCLIP15.59■□□□□ 0.09
CAPN1-214ENST00000528165 MUTP22033 750 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 RRM1P23921 792 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 ZNF76P36508 570 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 NFIXQ14938 502 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 SLC45A4Q5BKX6 768 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 MFSD14BQ5SR56 506 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 SNX30Q5VWJ9 437 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 C4orf50Q6ZRC1 276 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 SMIM5Q71RC9 77 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 KCTD17Q8N5Z5 321 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 P2RX7Q99572 595 aaKnown RBP15.59■□□□□ 0.09
CAPN1-214ENST00000528165 TLE6Q9H808 572 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 LRRC4BQ9NT99 713 aa15.59■□□□□ 0.09
CAPN1-214ENST00000528165 SMG5Q9UPR3 1016 aaKnown RBP15.59■□□□□ 0.09
CAPN1-214ENST00000528165 ECE2O60344 883 aa15.58■□□□□ 0.09
CAPN1-214ENST00000528165 GCLMP48507 274 aa15.58■□□□□ 0.09
CAPN1-214ENST00000528165 FYB2Q5VWT5 728 aa15.58■□□□□ 0.09
CAPN1-214ENST00000528165 IZUMO3Q5VZ72 239 aa15.58■□□□□ 0.09
CAPN1-214ENST00000528165 OR52E8Q6IFG1 317 aa15.58■□□□□ 0.09
CAPN1-214ENST00000528165 NLRP9Q7RTR0 991 aa15.58■□□□□ 0.09
CAPN1-214ENST00000528165 RELL1Q8IUW5 271 aa15.58■□□□□ 0.09
CAPN1-214ENST00000528165 CCDC89Q8N998 374 aa15.58■□□□□ 0.09
CAPN1-214ENST00000528165 KIFAP3Q92845 792 aa15.58■□□□□ 0.09
CAPN1-214ENST00000528165 KAT5Q92993 513 aa15.58■□□□□ 0.09
CAPN1-214ENST00000528165 FAM163AQ96GL9 167 aaPredicted RBP15.58■□□□□ 0.09
CAPN1-214ENST00000528165 CFAP57Q96MR6 1250 aa15.58■□□□□ 0.09
CAPN1-214ENST00000528165 FIZ1Q96SL8 496 aa15.58■□□□□ 0.09
CAPN1-214ENST00000528165 RBM15Q96T37 977 aaKnown RBP eCLIP15.58■□□□□ 0.09
CAPN1-214ENST00000528165 PPP1R12CQ9BZL4 782 aa15.58■□□□□ 0.09
CAPN1-214ENST00000528165 CD209Q9NNX6 404 aa15.58■□□□□ 0.09
CAPN1-214ENST00000528165 SAR1AQ9NR31 198 aa15.58■□□□□ 0.09
CAPN1-214ENST00000528165 LNPEPQ9UIQ6 1025 aa15.58■□□□□ 0.09
CAPN1-214ENST00000528165 CYP26A1O43174 497 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 ABHD2P08910 425 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 GSTA2P09210 222 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 CA4P22748 312 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 MAGEA4P43358 317 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 POLE2P56282 527 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 RASA3Q14644 834 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 RCN1Q15293 331 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 DDB1Q16531 1140 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 HHATQ5VTY9 493 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 SLC47A2Q86VL8 602 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 CFAP61Q8NHU2 1237 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 ACP6Q9NPH0 428 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 SERPINB13Q9UIV8 391 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 RXRBP28702 533 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 SREBF1P36956 1147 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 VAMP7P51809 220 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 PPP3CAQ08209 521 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 RFWD3Q6PCD5 774 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 CEP128Q6ZU80 1094 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 MTDHQ86UE4 582 aaKnown RBP15.58■□□□□ 0.08
CAPN1-214ENST00000528165 ZC3H18Q86VM9 953 aaKnown RBP15.58■□□□□ 0.08
CAPN1-214ENST00000528165 SLC9A9Q8IVB4 645 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 C4orf33Q8N1A6 199 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 FGD4Q96M96 766 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 TRAPPC9Q96Q05 1148 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms