RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 FAM160B1Q5W0V3 765 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 CRELD2Q6UXH1 353 aaPredicted RBP16.43■□□□□ 0.22
USH1C-207ENST00000527720 TRIM72Q6ZMU5 477 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 SEPT14Q6ZU15 432 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 MCOLN2Q8IZK6 566 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 ZNF526Q8TF50 670 aaPredicted RBP16.43■□□□□ 0.22
USH1C-207ENST00000527720 MAGOHBQ96A72 148 aaKnown RBP16.43■□□□□ 0.22
USH1C-207ENST00000527720 FAM170AA1A519 330 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 SORBS3O60504 671 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 FARP2O94887 1054 aaPredicted RBP16.43■□□□□ 0.22
USH1C-207ENST00000527720 UBA1P22314 1058 aaKnown RBP16.43■□□□□ 0.22
USH1C-207ENST00000527720 SLC1A1P43005 524 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 FNTAP49354 379 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 HIRAP54198 1017 aaPredicted RBP16.43■□□□□ 0.22
USH1C-207ENST00000527720 AADACL2Q6P093 401 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 FOXR1Q6PIV2 292 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 CGRRF1Q99675 332 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 RBAKQ9NYW8 714 aaPredicted RBP16.43■□□□□ 0.22
USH1C-207ENST00000527720 SBF1O95248 1867 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 A0A0B4J269 797 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 GSTTP1A0A1W2PQM5 241 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 CYP1A1P04798 512 aaPredicted RBP16.42■□□□□ 0.22
USH1C-207ENST00000527720 TBXAS1P24557 533 aaPredicted RBP16.42■□□□□ 0.22
USH1C-207ENST00000527720 CENPCQ03188 943 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 VGLL4Q14135 290 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 DNAJC21Q5F1R6 531 aaKnown RBP16.42■□□□□ 0.22
USH1C-207ENST00000527720 CCDC137Q6PK04 289 aaKnown RBP16.42■□□□□ 0.22
USH1C-207ENST00000527720 GLG1Q92896 1179 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 C18orf8Q96DM3 657 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 MSTO1Q9BUK6 570 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 CHORDC1Q9UHD1 332 aaPredicted RBP16.42■□□□□ 0.22
USH1C-207ENST00000527720 RSPH14Q9UHP6 348 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 RRP15Q9Y3B9 282 aaKnown RBP16.42■□□□□ 0.22
USH1C-207ENST00000527720 ADGRA2Q96PE1 1338 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 MAPK4P31152 587 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 COPB2P35606 906 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 ACOT2P49753 483 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 AP3M2P53677 418 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 SMYD5Q6GMV2 418 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 BCAS4Q8TDM0 211 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 MAIP1Q8WWC4 291 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 VCPIP1Q96JH7 1222 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 BTBD6Q96KE9 485 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 TRIM31Q9BZY9 425 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 HAPLN2Q9GZV7 340 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 CNTN6Q9UQ52 1028 aa16.42■□□□□ 0.22
USH1C-207ENST00000527720 MYO1FO00160 1098 aa16.41■□□□□ 0.22
USH1C-207ENST00000527720 VNN1O95497 513 aa16.41■□□□□ 0.22
USH1C-207ENST00000527720 COILP38432 576 aaPredicted RBP16.41■□□□□ 0.22
USH1C-207ENST00000527720 CUL2Q13617 745 aa16.41■□□□□ 0.22
USH1C-207ENST00000527720 TREML2Q5T2D2 321 aa16.41■□□□□ 0.22
USH1C-207ENST00000527720 ZPBP2Q6X784 338 aa16.41■□□□□ 0.22
USH1C-207ENST00000527720 SLCO2A1Q92959 643 aa16.41■□□□□ 0.22
USH1C-207ENST00000527720 FAM167AQ96KS9 214 aa16.41■□□□□ 0.22
USH1C-207ENST00000527720 LRRC19Q9H756 370 aa16.41■□□□□ 0.22
USH1C-207ENST00000527720 BTBD7Q9P203 1132 aa16.41■□□□□ 0.22
USH1C-207ENST00000527720 ANAPC7Q9UJX3 599 aa16.41■□□□□ 0.22
USH1C-207ENST00000527720 FSCN2O14926 492 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 ADCY3O60266 1144 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 MAFO75444 373 aaPredicted RBP16.4■□□□□ 0.22
USH1C-207ENST00000527720 POTEJP0CG39 1038 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 ACO1P21399 889 aaKnown RBP16.4■□□□□ 0.22
USH1C-207ENST00000527720 NSFP46459 744 aaKnown RBP16.4■□□□□ 0.22
USH1C-207ENST00000527720 ATP1A2P50993 1020 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 STAT5BP51692 787 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 EFNA5P52803 228 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 FSTL1Q12841 308 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 GRM1Q13255 1194 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 PDCLQ13371 301 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 SIX1Q15475 284 aaPredicted RBP16.4■□□□□ 0.22
USH1C-207ENST00000527720 ZDHHC14Q8IZN3 488 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 PCYT2Q99447 389 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 TSPYL1Q9H0U9 437 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 MTRF1LQ9UGC7 380 aaKnown RBP16.4■□□□□ 0.22
USH1C-207ENST00000527720 CSADQ9Y600 493 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 GAS2O43903 313 aaKnown RBP16.4■□□□□ 0.22
USH1C-207ENST00000527720 NUDT17P0C025 328 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 MDH1P40925 334 aaKnown RBP16.4■□□□□ 0.22
USH1C-207ENST00000527720 WNT7BP56706 349 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 LMBRD2Q68DH5 695 aaPredicted RBP16.4■□□□□ 0.22
USH1C-207ENST00000527720 TTC27Q6P3X3 843 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 METTL7BQ6UX53 244 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 ZDHHC24Q6UX98 284 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 EXOC8Q8IYI6 725 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 SEPT1Q8WYJ6 367 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 MPHOSPH6Q99547 160 aaKnown RBP16.4■□□□□ 0.22
USH1C-207ENST00000527720 TARS2Q9BW92 718 aaKnown RBP16.4■□□□□ 0.22
USH1C-207ENST00000527720 FAM107BQ9H098 131 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 SPATC1LQ9H0A9 340 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 PABPC3Q9H361 631 aaKnown RBP16.4■□□□□ 0.22
USH1C-207ENST00000527720 GRHL1Q9NZI5 618 aa16.4■□□□□ 0.22
USH1C-207ENST00000527720 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.4■□□□□ 0.22
USH1C-207ENST00000527720 PTPRJQ12913 1337 aa16.39■□□□□ 0.22
USH1C-207ENST00000527720 PASKQ96RG2 1323 aa16.39■□□□□ 0.22
USH1C-207ENST00000527720 CNTNAP2Q9UHC6 1331 aa16.39■□□□□ 0.22
USH1C-207ENST00000527720 SOWAHBA6NEL2 793 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 CLTAP09496 248 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 PLTPP55058 493 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 PTP4A2Q12974 167 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 CAPSQ13938 189 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms