RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 R4GN57 208 aa23■■□□□ 1.27
PKP3-205ENST00000527442 SMC2O95347 1197 aa22.99■■□□□ 1.27
PKP3-205ENST00000527442 EFEMP2O95967 443 aa22.99■■□□□ 1.27
PKP3-205ENST00000527442 GLUD1P00367 558 aa22.99■■□□□ 1.27
PKP3-205ENST00000527442 SRGAP2CP0DJJ0 459 aa22.99■■□□□ 1.27
PKP3-205ENST00000527442 GLUD2P49448 558 aa22.99■■□□□ 1.27
PKP3-205ENST00000527442 XKR9Q5GH70 373 aa22.99■■□□□ 1.27
PKP3-205ENST00000527442 RINT1Q6NUQ1 792 aa22.99■■□□□ 1.27
PKP3-205ENST00000527442 SRGAP1Q7Z6B7 1085 aa22.99■■□□□ 1.27
PKP3-205ENST00000527442 COLGALT2Q8IYK4 626 aa22.99■■□□□ 1.27
PKP3-205ENST00000527442 SLC44A3Q8N4M1 653 aa22.99■■□□□ 1.27
PKP3-205ENST00000527442 SMG8Q8ND04 991 aaKnown RBP22.99■■□□□ 1.27
PKP3-205ENST00000527442 PRPF31Q8WWY3 499 aaKnown RBP22.99■■□□□ 1.27
PKP3-205ENST00000527442 RIN2Q8WYP3 895 aaPredicted RBP22.99■■□□□ 1.27
PKP3-205ENST00000527442 TMEM143Q96AN5 459 aa22.99■■□□□ 1.27
PKP3-205ENST00000527442 ZNF707Q96C28 371 aaPredicted RBP22.99■■□□□ 1.27
PKP3-205ENST00000527442 ANP32EQ9BTT0 268 aa22.99■■□□□ 1.27
PKP3-205ENST00000527442 RUSC1Q9BVN2 902 aa22.99■■□□□ 1.27
PKP3-205ENST00000527442 RHOBTB2Q9BYZ6 727 aa22.99■■□□□ 1.27
PKP3-205ENST00000527442 BLZF1Q9H2G9 400 aa22.99■■□□□ 1.27
PKP3-205ENST00000527442 TBC1D17Q9HA65 648 aa22.99■■□□□ 1.27
PKP3-205ENST00000527442 BMP2KQ9NSY1 1161 aaPredicted RBP22.99■■□□□ 1.27
PKP3-205ENST00000527442 PCDHA5Q9Y5H7 936 aa22.99■■□□□ 1.27
PKP3-205ENST00000527442 F8W810 466 aa22.98■■□□□ 1.27
PKP3-205ENST00000527442 RFX1P22670 979 aa22.98■■□□□ 1.27
PKP3-205ENST00000527442 GUCY2CP25092 1073 aa22.98■■□□□ 1.27
PKP3-205ENST00000527442 CASP1P29466 404 aa22.98■■□□□ 1.27
PKP3-205ENST00000527442 OR1G1P47890 313 aa22.98■■□□□ 1.27
PKP3-205ENST00000527442 ARSHQ5FYA8 562 aa22.98■■□□□ 1.27
PKP3-205ENST00000527442 KIAA0319Q5VV43 1072 aa22.98■■□□□ 1.27
PKP3-205ENST00000527442 PADI6Q6TGC4 694 aa22.98■■□□□ 1.27
PKP3-205ENST00000527442 C1orf186Q6ZWK4 172 aa22.98■■□□□ 1.27
PKP3-205ENST00000527442 SLC7A3Q8WY07 619 aa22.98■■□□□ 1.27
PKP3-205ENST00000527442 SMG7Q92540 1137 aaKnown RBP22.98■■□□□ 1.27
PKP3-205ENST00000527442 DDX12PQ92771 950 aa22.98■■□□□ 1.27
PKP3-205ENST00000527442 SMARCE1Q969G3 411 aa22.98■■□□□ 1.27
PKP3-205ENST00000527442 DNAJC19Q96DA6 116 aa22.98■■□□□ 1.27
PKP3-205ENST00000527442 GSDMAQ96QA5 445 aa22.98■■□□□ 1.27
PKP3-205ENST00000527442 TIPINQ9BVW5 301 aa22.98■■□□□ 1.27
PKP3-205ENST00000527442 DHX33Q9H6R0 707 aaKnown RBP22.98■■□□□ 1.27
PKP3-205ENST00000527442 RXFP1Q9HBX9 757 aa22.98■■□□□ 1.27
PKP3-205ENST00000527442 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.97■■□□□ 1.27
PKP3-205ENST00000527442 SYCE3A1L190 88 aa22.97■■□□□ 1.27
PKP3-205ENST00000527442 KLRC4O43908 158 aa22.97■■□□□ 1.27
PKP3-205ENST00000527442 LMNAP02545 664 aaKnown RBP22.97■■□□□ 1.27
PKP3-205ENST00000527442 SPATA31D3P0C874 917 aa22.97■■□□□ 1.27
PKP3-205ENST00000527442 SRFP11831 508 aa22.97■■□□□ 1.27
PKP3-205ENST00000527442 ASIC1P78348 528 aa22.97■■□□□ 1.27
PKP3-205ENST00000527442 LAMTOR4Q0VGL1 99 aa22.97■■□□□ 1.27
PKP3-205ENST00000527442 KCNB1Q14721 858 aa22.97■■□□□ 1.27
PKP3-205ENST00000527442 CYP26C1Q6V0L0 522 aa22.97■■□□□ 1.27
PKP3-205ENST00000527442 SPATA31D4Q6ZUB0 917 aa22.97■■□□□ 1.27
PKP3-205ENST00000527442 PSPC1Q8WXF1 523 aaKnown RBP22.97■■□□□ 1.27
PKP3-205ENST00000527442 ERCC4Q92889 916 aaPredicted RBP22.97■■□□□ 1.27
PKP3-205ENST00000527442 CEP170P1Q96L14 293 aa22.97■■□□□ 1.27
PKP3-205ENST00000527442 SSX2IPQ9Y2D8 614 aa22.97■■□□□ 1.27
PKP3-205ENST00000527442 MIA3Q5JRA6 1907 aa22.97■■□□□ 1.27
PKP3-205ENST00000527442 MYH11P35749 1972 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 FRYLO94915 3013 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 DOCK6Q96HP0 2047 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 PVALEFA0A1B0GWK0 134 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 FRMD3A2A2Y4 597 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 DGAT1O75907 488 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 RPN1P04843 607 aaKnown RBP22.96■■□□□ 1.27
PKP3-205ENST00000527442 ITGA4P13612 1032 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 ZNF445P59923 1031 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 DSC1Q08554 894 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 ELMSAN1Q6PJG2 1045 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 UNC13DQ70J99 1090 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 TRIML1Q8N9V2 468 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 GPR152Q8TDT2 470 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 RMDN1Q96DB5 314 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 B3GALT6Q96L58 329 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 GAD1Q99259 594 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 REEP2Q9BRK0 252 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 EIF2AQ9BY44 585 aaKnown RBP22.96■■□□□ 1.27
PKP3-205ENST00000527442 GZF1Q9H116 711 aaPredicted RBP22.96■■□□□ 1.27
PKP3-205ENST00000527442 RNF39Q9H2S5 420 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 DPP7Q9UHL4 492 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 ODF2LQ9ULJ1 636 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 IPPQ9Y573 584 aa22.96■■□□□ 1.27
PKP3-205ENST00000527442 ARL5CA6NH57 179 aa22.95■■□□□ 1.26
PKP3-205ENST00000527442 USO1O60763 962 aaKnown RBP22.95■■□□□ 1.26
PKP3-205ENST00000527442 MLH1P40692 756 aa22.95■■□□□ 1.26
PKP3-205ENST00000527442 RFC5P40937 340 aa22.95■■□□□ 1.26
PKP3-205ENST00000527442 COL4A3Q01955 1670 aa22.95■■□□□ 1.26
PKP3-205ENST00000527442 DSG1Q02413 1049 aa22.95■■□□□ 1.26
PKP3-205ENST00000527442 ZFP42Q96MM3 310 aa22.95■■□□□ 1.26
PKP3-205ENST00000527442 FUCA2Q9BTY2 467 aa22.95■■□□□ 1.26
PKP3-205ENST00000527442 SEMA4AQ9H3S1 761 aa22.95■■□□□ 1.26
PKP3-205ENST00000527442 RMND1Q9NWS8 449 aa22.95■■□□□ 1.26
PKP3-205ENST00000527442 MIOSQ9NXC5 875 aa22.95■■□□□ 1.26
PKP3-205ENST00000527442 PAPLNO95428 1278 aa22.94■■□□□ 1.26
PKP3-205ENST00000527442 KRT18P05783 430 aaKnown RBP22.94■■□□□ 1.26
PKP3-205ENST00000527442 DCNP07585 359 aaKnown RBP22.94■■□□□ 1.26
PKP3-205ENST00000527442 SCNN1GP51170 649 aa22.94■■□□□ 1.26
PKP3-205ENST00000527442 EHHADHQ08426 723 aa22.94■■□□□ 1.26
PKP3-205ENST00000527442 GET4Q7L5D6 327 aaPredicted RBP22.94■■□□□ 1.26
PKP3-205ENST00000527442 DYMQ7RTS9 669 aa22.94■■□□□ 1.26
PKP3-205ENST00000527442 PALB2Q86YC2 1186 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms