RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 EDN1P05305 212 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 OR52Z1P0C646 297 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 XRCC6P12956 609 aaKnown RBP eCLIP12.92□□□□□ -0.34
CAPN1-204ENST00000526468 SCN1AP35498 2009 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 NAMPTP43490 491 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 GUCY1B3Q02153 619 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 PPP2R5AQ15172 486 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 SAFBQ15424 915 aaKnown RBP eCLIP12.92□□□□□ -0.34
CAPN1-204ENST00000526468 FAM187BQ17R55 369 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 DCAF4L1Q3SXM0 396 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 HAUS3Q68CZ6 603 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 PHLDB3Q6NSJ2 640 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 PADI6Q6TGC4 694 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 PARM1Q6UWI2 310 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 CATSPER3Q86XQ3 398 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 ING5Q8WYH8 240 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 NACC1Q96RE7 527 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 KXD1Q9BQD3 176 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 CLSTN3Q9BQT9 956 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 CCDC113Q9H0I3 377 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 CXCL16Q9H2A7 254 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 FZD8Q9H461 694 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 USP20Q9Y2K6 914 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 SIT1Q9Y3P8 196 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 ZFP37Q9Y6Q3 630 aaPredicted RBP12.92□□□□□ -0.34
CAPN1-204ENST00000526468 GREB1Q4ZG55 1949 aa12.92□□□□□ -0.34
CAPN1-204ENST00000526468 FRYLO94915 3013 aa12.91□□□□□ -0.34
CAPN1-204ENST00000526468 MYO16Q9Y6X6 1858 aa12.91□□□□□ -0.34
CAPN1-204ENST00000526468 ADAM12O43184 909 aa12.91□□□□□ -0.34
CAPN1-204ENST00000526468 HOXA9P31269 272 aa12.91□□□□□ -0.34
CAPN1-204ENST00000526468 MLF2Q15773 248 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-204ENST00000526468 PABPC1LQ4VXU2 614 aaKnown RBP12.91□□□□□ -0.34
CAPN1-204ENST00000526468 EEF1DP3Q658K8 133 aa12.91□□□□□ -0.34
CAPN1-204ENST00000526468 CLEC17AQ6ZS10 378 aa12.91□□□□□ -0.34
CAPN1-204ENST00000526468 ERMP1Q7Z2K6 904 aa12.91□□□□□ -0.34
CAPN1-204ENST00000526468 APBB1IPQ7Z5R6 666 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-204ENST00000526468 LNX1Q8TBB1 728 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-204ENST00000526468 FGF13Q92913 245 aa12.91□□□□□ -0.34
CAPN1-204ENST00000526468 SHDQ96IW2 340 aa12.91□□□□□ -0.34
CAPN1-204ENST00000526468 POLR3CQ9BUI4 534 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-204ENST00000526468 RRAGDQ9NQL2 400 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-204ENST00000526468 HCFC1R1Q9NWW0 138 aa12.91□□□□□ -0.34
CAPN1-204ENST00000526468 CDY1Q9Y6F8 540 aa12.91□□□□□ -0.34
CAPN1-204ENST00000526468 PHLPP2Q6ZVD8 1323 aa12.9□□□□□ -0.34
CAPN1-204ENST00000526468 ACKR2O00590 384 aa12.9□□□□□ -0.34
CAPN1-204ENST00000526468 LRRN2O75325 713 aa12.9□□□□□ -0.34
CAPN1-204ENST00000526468 B3GAT3O94766 335 aa12.9□□□□□ -0.34
CAPN1-204ENST00000526468 OR1D2P34982 312 aa12.9□□□□□ -0.34
CAPN1-204ENST00000526468 RBM25P49756 843 aaKnown RBP12.9□□□□□ -0.34
CAPN1-204ENST00000526468 GPC5P78333 572 aa12.9□□□□□ -0.34
CAPN1-204ENST00000526468 SNW1Q13573 536 aaKnown RBP12.9□□□□□ -0.34
CAPN1-204ENST00000526468 UBXN2BQ14CS0 331 aa12.9□□□□□ -0.34
CAPN1-204ENST00000526468 NAB2Q15742 525 aa12.9□□□□□ -0.34
CAPN1-204ENST00000526468 AXDND1Q5T1B0 1012 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-204ENST00000526468 ATF7IP2Q5U623 682 aa12.9□□□□□ -0.34
CAPN1-204ENST00000526468 NPAS3Q8IXF0 933 aa12.9□□□□□ -0.34
CAPN1-204ENST00000526468 ITFG1Q8TB96 612 aa12.9□□□□□ -0.34
CAPN1-204ENST00000526468 DDX27Q96GQ7 796 aaKnown RBP12.9□□□□□ -0.34
CAPN1-204ENST00000526468 IFT74Q96LB3 600 aa12.9□□□□□ -0.34
CAPN1-204ENST00000526468 RPP25Q9BUL9 199 aaKnown RBP12.9□□□□□ -0.34
CAPN1-204ENST00000526468 SEMA4AQ9H3S1 761 aa12.9□□□□□ -0.34
CAPN1-204ENST00000526468 GOLGA2P5Q9HBQ8 144 aa12.9□□□□□ -0.34
CAPN1-204ENST00000526468 SPATA6Q9NWH7 488 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-204ENST00000526468 DLGAP2Q9P1A6 1054 aa12.9□□□□□ -0.34
CAPN1-204ENST00000526468 MTRRQ9UBK8 725 aa12.9□□□□□ -0.34
CAPN1-204ENST00000526468 KIAA1549LQ6ZVL6 1849 aa12.9□□□□□ -0.34
CAPN1-204ENST00000526468 HELZP42694 1942 aaKnown RBP12.9□□□□□ -0.35
CAPN1-204ENST00000526468 CNOT1A5YKK6 2376 aaKnown RBP12.89□□□□□ -0.35
CAPN1-204ENST00000526468 SDK1Q7Z5N4 2213 aa12.89□□□□□ -0.35
CAPN1-204ENST00000526468 EML5Q05BV3 1969 aa12.89□□□□□ -0.35
CAPN1-204ENST00000526468 TMEM189-UBE2V1I3L0A0 370 aa12.89□□□□□ -0.35
CAPN1-204ENST00000526468 I3L4J1 428 aa12.89□□□□□ -0.35
CAPN1-204ENST00000526468 SP9P0CG40 484 aa12.89□□□□□ -0.35
CAPN1-204ENST00000526468 CYP11B2P19099 503 aa12.89□□□□□ -0.35
CAPN1-204ENST00000526468 FGFR3P22607 806 aa12.89□□□□□ -0.35
CAPN1-204ENST00000526468 RPA1P27694 616 aa12.89□□□□□ -0.35
CAPN1-204ENST00000526468 TKTP29401 623 aaKnown RBP12.89□□□□□ -0.35
CAPN1-204ENST00000526468 CCT6AP40227 531 aaKnown RBP12.89□□□□□ -0.35
CAPN1-204ENST00000526468 ST3GAL1Q11201 340 aa12.89□□□□□ -0.35
CAPN1-204ENST00000526468 GNL2Q13823 731 aaKnown RBP12.89□□□□□ -0.35
CAPN1-204ENST00000526468 ZNF568Q3ZCX4 644 aa12.89□□□□□ -0.35
CAPN1-204ENST00000526468 TTC38Q5R3I4 469 aa12.89□□□□□ -0.35
CAPN1-204ENST00000526468 C1orf210Q8IVY1 113 aa12.89□□□□□ -0.35
CAPN1-204ENST00000526468 KIAA2013Q8IYS2 634 aa12.89□□□□□ -0.35
CAPN1-204ENST00000526468 C8orf76Q96K31 380 aa12.89□□□□□ -0.35
CAPN1-204ENST00000526468 PPP1R10Q96QC0 940 aaKnown RBP12.89□□□□□ -0.35
CAPN1-204ENST00000526468 BCO2Q9BYV7 579 aa12.89□□□□□ -0.35
CAPN1-204ENST00000526468 ACACBO00763 2458 aa12.89□□□□□ -0.35
CAPN1-204ENST00000526468 MAP1BP46821 2468 aaKnown RBP12.89□□□□□ -0.35
CAPN1-204ENST00000526468 KANSL1LA0AUZ9 987 aa12.88□□□□□ -0.35
CAPN1-204ENST00000526468 KINO60870 393 aaKnown RBP12.88□□□□□ -0.35
CAPN1-204ENST00000526468 POU2F2P09086 479 aa12.88□□□□□ -0.35
CAPN1-204ENST00000526468 GLULP15104 373 aa12.88□□□□□ -0.35
CAPN1-204ENST00000526468 CLCNKBP51801 687 aa12.88□□□□□ -0.35
CAPN1-204ENST00000526468 NEK4P51957 841 aa12.88□□□□□ -0.35
CAPN1-204ENST00000526468 EFNA5P52803 228 aa12.88□□□□□ -0.35
CAPN1-204ENST00000526468 YARSP54577 528 aaKnown RBP12.88□□□□□ -0.35
CAPN1-204ENST00000526468 STARD6P59095 220 aa12.88□□□□□ -0.35
CAPN1-204ENST00000526468 PFKPQ01813 784 aa12.88□□□□□ -0.35
CAPN1-204ENST00000526468 ORC2Q13416 577 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms