RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 TJP1Q07157 1748 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 TNS1Q9HBL0 1735 aaKnown RBP5.52□□□□□ -1.53
USP48-211ENST00000526044 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.52□□□□□ -1.53
USP48-211ENST00000526044 PI4KAP2A4QPH2 592 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 PLIN1O60240 522 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 BRINP1O60477 761 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 CNGA1P29973 690 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 RFC4P35249 363 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 MRE11P49959 708 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 STAT5BP51692 787 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 SESN2P58004 480 aaPredicted RBP5.52□□□□□ -1.53
USP48-211ENST00000526044 RAC3P60763 192 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 AGBL4Q5VU57 503 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 BROXQ5VW32 411 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 SLC4A10Q6U841 1118 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 KSR2Q6VAB6 950 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 ATF7IPQ6VMQ6 1270 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 KIF6Q6ZMV9 814 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 FRMD7Q6ZUT3 714 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 USP30Q70CQ3 517 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 BMP8AQ7Z5Y6 402 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 PI4KAP1Q8N8J0 262 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 OR5AN1Q8NGI8 311 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 PLBD2Q8NHP8 589 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 LMF1Q96S06 567 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 KIAA1683Q9H0B3 1180 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 OR10A2Q9H208 303 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 STK32BQ9NY57 414 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 KCNG1Q9UIX4 513 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 MAGEL2Q9UJ55 1249 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 SYNPO2Q9UMS6 1093 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 NR2E1Q9Y466 385 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 MYH14Q7Z406 1995 aaKnown RBP5.52□□□□□ -1.53
USP48-211ENST00000526044 COL5A3P25940 1745 aaPredicted RBP5.51□□□□□ -1.53
USP48-211ENST00000526044 ERVV-1B6SEH8 477 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 ARHGAP6O43182 974 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 H2AFYO75367 372 aaKnown RBP5.51□□□□□ -1.53
USP48-211ENST00000526044 ULK1O75385 1050 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 ID4P47928 161 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 RRP1P56182 461 aaKnown RBP5.51□□□□□ -1.53
USP48-211ENST00000526044 ANTXR2P58335 489 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 NEXNQ0ZGT2 675 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 NFYCQ13952 458 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 SLC15A2Q16348 729 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 RNF151Q2KHN1 245 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 KLHDC10Q6PID8 442 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 UNQ6494/PRO21346Q6UXR6 183 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 SMIM5Q71RC9 77 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 LIMS2Q7Z4I7 341 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 RASSF3Q86WH2 238 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 AFAP1L2Q8N4X5 818 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 DNAAF4Q8WXU2 420 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 GFM2Q969S9 779 aaKnown RBP5.51□□□□□ -1.53
USP48-211ENST00000526044 NEIL1Q96FI4 390 aaPredicted RBP5.51□□□□□ -1.53
USP48-211ENST00000526044 DYDC2Q96IM9 177 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 PTPN18Q99952 460 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 PITHD1Q9GZP4 211 aaPredicted RBP5.51□□□□□ -1.53
USP48-211ENST00000526044 SEMA4AQ9H3S1 761 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 SPC25Q9HBM1 224 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 DENND2AQ9ULE3 1009 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 FAM184BQ9ULE4 1060 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 APOBEC2Q9Y235 224 aaKnown RBP5.51□□□□□ -1.53
USP48-211ENST00000526044 MAP3K2Q9Y2U5 619 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 NOC2LQ9Y3T9 749 aaKnown RBP5.51□□□□□ -1.53
USP48-211ENST00000526044 C4BP0C0L5 1744 aa5.51□□□□□ -1.53
USP48-211ENST00000526044 RNF123Q5XPI4 1314 aa5.5□□□□□ -1.53
USP48-211ENST00000526044 MAP3K15Q6ZN16 1313 aa5.5□□□□□ -1.53
USP48-211ENST00000526044 RGPD3A6NKT7 1758 aaPredicted RBP5.5□□□□□ -1.53
USP48-211ENST00000526044 RGPD4Q7Z3J3 1758 aa5.5□□□□□ -1.53
USP48-211ENST00000526044 CICQ96RK0 1608 aaPredicted RBP5.5□□□□□ -1.53
USP48-211ENST00000526044 A0A0A6YYJ9 748 aa5.5□□□□□ -1.53
USP48-211ENST00000526044 AKAP8O43823 692 aaKnown RBP5.5□□□□□ -1.53
USP48-211ENST00000526044 TRIM27P14373 513 aa5.5□□□□□ -1.53
USP48-211ENST00000526044 CCT4P50991 539 aaKnown RBP5.5□□□□□ -1.53
USP48-211ENST00000526044 SESN3P58005 492 aa5.5□□□□□ -1.53
USP48-211ENST00000526044 ZXDAP98168 799 aa5.5□□□□□ -1.53
USP48-211ENST00000526044 TCIRG1Q13488 830 aa5.5□□□□□ -1.53
USP48-211ENST00000526044 HLFQ16534 295 aa5.5□□□□□ -1.53
USP48-211ENST00000526044 TBR1Q16650 682 aa5.5□□□□□ -1.53
USP48-211ENST00000526044 HSP90AB3PQ58FF7 597 aa5.5□□□□□ -1.53
USP48-211ENST00000526044 RNF187Q5TA31 235 aaPredicted RBP5.5□□□□□ -1.53
USP48-211ENST00000526044 TMED8Q6PL24 325 aaPredicted RBP5.5□□□□□ -1.53
USP48-211ENST00000526044 CIR1Q86X95 450 aaPredicted RBP5.5□□□□□ -1.53
USP48-211ENST00000526044 COL23A1Q86Y22 540 aaPredicted RBP5.5□□□□□ -1.53
USP48-211ENST00000526044 FTSJ3Q8IY81 847 aaKnown RBP5.5□□□□□ -1.53
USP48-211ENST00000526044 LPPQ93052 612 aa5.5□□□□□ -1.53
USP48-211ENST00000526044 FERMT2Q96AC1 680 aa5.5□□□□□ -1.53
USP48-211ENST00000526044 LRRC37BQ96QE4 947 aa5.5□□□□□ -1.53
USP48-211ENST00000526044 SSBP3Q9BWW4 388 aaPredicted RBP5.5□□□□□ -1.53
USP48-211ENST00000526044 MTG2Q9H4K7 406 aa5.5□□□□□ -1.53
USP48-211ENST00000526044 NARFQ9UHQ1 456 aa5.5□□□□□ -1.53
USP48-211ENST00000526044 PUF60Q9UHX1 559 aaKnown RBP5.5□□□□□ -1.53
USP48-211ENST00000526044 MYPNQ86TC9 1320 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 NUP98P52948 1817 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 OPHN1O60890 802 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 DNAJC6O75061 913 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 CAMTA2O94983 1202 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 CR2P20023 1033 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 ADAM15Q13444 863 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 C20orf194Q5TEA3 1177 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms