RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 ZNF512BQ96KM6 892 aaPredicted RBP11.97□□□□□ -0.49
CLNS1A-204ENST00000525428 IQCGQ9H095 443 aaKnown RBP11.97□□□□□ -0.49
CLNS1A-204ENST00000525428 PAIP2BQ9ULR5 123 aaKnown RBP11.97□□□□□ -0.49
CLNS1A-204ENST00000525428 CHD4Q14839 1912 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 SCN7AQ01118 1682 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 TNRC6CQ9HCJ0 1690 aaKnown RBP11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 POC1B-GALNT4F8VUJ3 575 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 BOLA2-SMG1P6H3BVE0 249 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 TXNDC9O14530 226 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 ZBED4O75132 1171 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 UFL1O94874 794 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 TTC4O95801 387 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 DLATP10515 647 aaKnown RBP11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 YY1P25490 414 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 RPL13P26373 211 aaKnown RBP11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 CETN2P41208 172 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 ADARP55265 1226 aaKnown RBP11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 MESDQ14696 234 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 CRY2Q49AN0 593 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 TMEM63BQ5T3F8 832 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 PHLDB3Q6NSJ2 640 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 ARHGAP27Q6ZUM4 889 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 ARMCX6Q7L4S7 300 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 OTOAQ7RTW8 1153 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 CFAP61Q8NHU2 1237 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 TBCKQ8TEA7 893 aa11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 NR1H4Q96RI1 486 aaPredicted RBP11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 METTL14Q9HCE5 456 aaKnown RBP11.96□□□□□ -0.49
CLNS1A-204ENST00000525428 CYP2D6P10635 497 aa11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 KRT15P19012 456 aa11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 CA4P22748 312 aa11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 RPA3P35244 121 aaPredicted RBP11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 NAPAP54920 295 aa11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 HPCAP84074 193 aa11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 COBLL1Q53SF7 1204 aa11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 CAVIN4Q5BKX8 364 aa11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 MDH1BQ5I0G3 518 aa11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 SCUBE1Q8IWY4 988 aa11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 ANKRD35Q8N283 1001 aa11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 RFWD2Q8NHY2 731 aa11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 CLPTM1LQ96KA5 538 aa11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 MIS12Q9H081 205 aa11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 C12orf65Q9H3J6 166 aaKnown RBP11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 ARMCX1Q9P291 453 aa11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 HEY2Q9UBP5 337 aa11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 POLLQ9UGP5 575 aa11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 AKAP11Q9UKA4 1901 aa11.96□□□□□ -0.5
CLNS1A-204ENST00000525428 LAD1O00515 517 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 EDF1O60869 148 aaKnown RBP11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 CCDC166P0CW27 439 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 PYGMP11217 842 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 FGFR1P11362 822 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 COILP38432 576 aaPredicted RBP11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 PIK3CAP42336 1068 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 GSTA3Q16772 222 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 ATG4AQ8WYN0 398 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 RAD54LQ92698 747 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 OLFM3Q96PB7 478 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 ECSITQ9BQ95 431 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 BRIP1Q9BX63 1249 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 UBA5Q9GZZ9 404 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 GCNT4Q9P109 453 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 GMEB1Q9Y692 573 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 M0R2N6 131 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 TRAFD1O14545 582 aaPredicted RBP11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 HAUS5O94927 633 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 POTEJP0CG39 1038 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 HIBADHP31937 336 aaKnown RBP11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 PGM1P36871 562 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 KRT17Q04695 432 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 NONOQ15233 471 aaKnown RBP eCLIP11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 GRIK5Q16478 980 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 ECM1Q16610 540 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 NME8Q8N427 588 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 FLAD1Q8NFF5 587 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 FAM118BQ9BPY3 351 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 SIKE1Q9BRV8 207 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 TMEM260Q9NX78 707 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 TAS2R1Q9NYW7 299 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 ZNF212Q9UDV6 495 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 BCS1LQ9Y276 419 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 UMODL1Q5DID0 1318 aa11.95□□□□□ -0.5
CLNS1A-204ENST00000525428 A0A0A6YYK5 440 aaPredicted RBP11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 CDH16O75309 829 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 PIAS1O75925 651 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 ASMTLO95671 621 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 ESRRAP11474 423 aaPredicted RBP11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 STAT1P42224 750 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 MTMR2Q13614 643 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 SPARCL1Q14515 664 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 CTC1Q2NKJ3 1217 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 SEL1L2Q5TEA6 688 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 NEK8Q86SG6 692 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 ZBTB8BQ8NAP8 495 aaPredicted RBP11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 STKLD1Q8NE28 680 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 BTBD6Q96KE9 485 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 PCYOX1Q9UHG3 505 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 RGL2O15211 777 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 CYTH3O43739 400 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 KRT18P05783 430 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms