RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 ADH1AP07327 375 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 MAPTP10636 758 aaKnown RBP13.74□□□□□ -0.21
SMCO4-202ENST00000525141 SIGLEC14Q08ET2 396 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 UPP1Q16831 310 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 SLC10A6Q3KNW5 377 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 FOXD4L6Q3SYB3 417 aaPredicted RBP13.74□□□□□ -0.21
SMCO4-202ENST00000525141 SEZ6Q53EL9 994 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 DCLRE1AQ6PJP8 1040 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 FOXD4L3Q6VB84 417 aaPredicted RBP13.74□□□□□ -0.21
SMCO4-202ENST00000525141 C15orf39Q6ZRI6 1047 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 GLYCTKQ8IVS8 523 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 KREMEN2Q8NCW0 462 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 C3orf58Q8NDZ4 430 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 HDAC7Q8WUI4 952 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 PBXIP1Q96AQ6 731 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 CLIC6Q96NY7 704 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 TIPINQ9BVW5 301 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 MRPL4Q9BYD3 311 aaKnown RBP13.74□□□□□ -0.21
SMCO4-202ENST00000525141 USTQ9Y2C2 406 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 NR2E1Q9Y466 385 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 MYH11P35749 1972 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 PHLPP2Q6ZVD8 1323 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 CUTAO60888 179 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 GLUD1P00367 558 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 PDGFBP01127 241 aaPredicted RBP13.73□□□□□ -0.21
SMCO4-202ENST00000525141 MCF2P10911 925 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 FGFR3P22607 806 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 TXLNAP40222 546 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 KRT85P78386 507 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 DMP1Q13316 513 aaPredicted RBP13.73□□□□□ -0.21
SMCO4-202ENST00000525141 MCM6Q14566 821 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 KARSQ15046 597 aaKnown RBP13.73□□□□□ -0.21
SMCO4-202ENST00000525141 SPECC1Q5M775 1068 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 CEP57Q86XR8 500 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 PIK3R5Q8WYR1 880 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 KCNN1Q92952 543 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 EPSTI1Q96J88 318 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 FIZ1Q96SL8 496 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 TTPALQ9BTX7 342 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 RHOBTB2Q9BYZ6 727 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.73□□□□□ -0.21
SMCO4-202ENST00000525141 CCDC39Q9UFE4 941 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
SMCO4-202ENST00000525141 HCN4Q9Y3Q4 1203 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 ZDBF2Q9HCK1 2354 aa13.73□□□□□ -0.21
SMCO4-202ENST00000525141 WDFY4Q6ZS81 3184 aa13.72□□□□□ -0.21
SMCO4-202ENST00000525141 TMEM189-UBE2V1I3L0A0 370 aa13.72□□□□□ -0.21
SMCO4-202ENST00000525141 I3L4J1 428 aa13.72□□□□□ -0.21
SMCO4-202ENST00000525141 KCNE1P15382 129 aa13.72□□□□□ -0.21
SMCO4-202ENST00000525141 BRCC3P46736 316 aa13.72□□□□□ -0.21
SMCO4-202ENST00000525141 NCKAP1LP55160 1127 aa13.72□□□□□ -0.21
SMCO4-202ENST00000525141 DHX8Q14562 1220 aaKnown RBP13.72□□□□□ -0.21
SMCO4-202ENST00000525141 AXDND1Q5T1B0 1012 aaPredicted RBP13.72□□□□□ -0.21
SMCO4-202ENST00000525141 MPZL3Q6UWV2 235 aa13.72□□□□□ -0.21
SMCO4-202ENST00000525141 HAUS6Q7Z4H7 955 aa13.72□□□□□ -0.21
SMCO4-202ENST00000525141 C18orf25Q96B23 403 aaPredicted RBP13.72□□□□□ -0.21
SMCO4-202ENST00000525141 FAM122AQ96E09 287 aa13.72□□□□□ -0.21
SMCO4-202ENST00000525141 MFSD14AQ96MC6 490 aa13.72□□□□□ -0.21
SMCO4-202ENST00000525141 ACAP3Q96P50 834 aa13.72□□□□□ -0.21
SMCO4-202ENST00000525141 REEP2Q9BRK0 252 aa13.72□□□□□ -0.21
SMCO4-202ENST00000525141 PLEKHA4Q9H4M7 779 aa13.72□□□□□ -0.21
SMCO4-202ENST00000525141 WDR6Q9NNW5 1121 aaKnown RBP13.72□□□□□ -0.21
SMCO4-202ENST00000525141 KCND2Q9NZV8 630 aa13.72□□□□□ -0.21
SMCO4-202ENST00000525141 DENND4AQ7Z401 1863 aa13.72□□□□□ -0.21
SMCO4-202ENST00000525141 SF3B1O75533 1304 aaKnown RBP eCLIP13.71□□□□□ -0.21
SMCO4-202ENST00000525141 TBC1D4O60343 1298 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 TOM1L1O75674 476 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 ZMYND10O75800 440 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 B3GAT3O94766 335 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 PLCG1P19174 1290 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 ME1P48163 572 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 ZNF131P52739 623 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 MCL1Q07820 350 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 ZBTB6Q15916 424 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 ZNF568Q3ZCX4 644 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 CYP26C1Q6V0L0 522 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 PLCD3Q8N3E9 789 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 RASSF8Q8NHQ8 419 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 RAD54LQ92698 747 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 SNX27Q96L92 541 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 SPATA32Q96LK8 384 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 MYADMQ96S97 322 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 TCHPQ9BT92 498 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 CCDC94Q9BW85 323 aaPredicted RBP13.71□□□□□ -0.21
SMCO4-202ENST00000525141 PRKD2Q9BZL6 878 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 SCAND2PQ9GZW5 306 aaPredicted RBP13.71□□□□□ -0.21
SMCO4-202ENST00000525141 STK17AQ9UEE5 414 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 KCNG1Q9UIX4 513 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 PCDHA7Q9UN72 937 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 SORCS3Q9UPU3 1222 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 FARP1Q9Y4F1 1045 aaPredicted RBP13.71□□□□□ -0.21
SMCO4-202ENST00000525141 DOCK8Q8NF50 2099 aa13.71□□□□□ -0.21
SMCO4-202ENST00000525141 NOTCH4Q99466 2003 aa13.71□□□□□ -0.22
SMCO4-202ENST00000525141 FAM189A1O60320 539 aa13.7□□□□□ -0.22
SMCO4-202ENST00000525141 TKTP29401 623 aaKnown RBP13.7□□□□□ -0.22
SMCO4-202ENST00000525141 OR1D2P34982 312 aa13.7□□□□□ -0.22
SMCO4-202ENST00000525141 SMTNP53814 917 aa13.7□□□□□ -0.22
SMCO4-202ENST00000525141 VCPP55072 806 aaKnown RBP13.7□□□□□ -0.22
SMCO4-202ENST00000525141 RAB33AQ14088 237 aa13.7□□□□□ -0.22
SMCO4-202ENST00000525141 MRPL58Q14197 206 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms