RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PPP1R12AO14974 1030 aaPredicted RBP8.36□□□□□ -1.07
NEDD8-203ENST00000524927 TBX1O43435 398 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 GLP2RO95838 553 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 ITGB5P18084 799 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 ITIH2P19823 946 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 MCAMP43121 646 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 TNFAIP2Q03169 654 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 ZNF528Q3MIS6 628 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 FAM209AQ5JX71 171 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 METTL24Q5JXM2 366 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 CDKAL1Q5VV42 579 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 NSMFQ6X4W1 530 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 C22orf34Q6ZV56 151 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 TLK2Q86UE8 772 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 DZIP1Q86YF9 867 aaKnown RBP8.36□□□□□ -1.07
NEDD8-203ENST00000524927 SCUBE1Q8IWY4 988 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 TP53INP2Q8IXH6 220 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 SYNPOQ8N3V7 929 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 CAGE1Q8TC20 777 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 YME1L1Q96TA2 773 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 RWDD3Q9Y3V2 267 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 LAS1LQ9Y4W2 734 aaKnown RBP8.36□□□□□ -1.07
NEDD8-203ENST00000524927 PIEZO2Q9H5I5 2752 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 NLRC5Q86WI3 1866 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 DNAJC25-GNG10A0A024R161 153 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 CYP26A1O43174 497 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 VAMP4O75379 141 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 GH2P01242 217 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 FGFR2P21802 821 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 CTNNB1P35222 781 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 BMPR1AP36894 532 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 GRIA2P42262 883 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 GYS2P54840 703 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 PUM3Q15397 648 aaKnown RBP8.35□□□□□ -1.07
NEDD8-203ENST00000524927 TKFCQ3LXA3 575 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 GTF2IRD2BQ6EKJ0 949 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 NOL8Q76FK4 1167 aaKnown RBP8.35□□□□□ -1.07
NEDD8-203ENST00000524927 KIAA0907Q7Z7F0 614 aaPredicted RBP8.35□□□□□ -1.07
NEDD8-203ENST00000524927 GTF2IRD2Q86UP8 949 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 C1orf210Q8IVY1 113 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 FAM181AQ8N9Y4 354 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 LINS1Q8NG48 757 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 ENOX1Q8TC92 643 aaKnown RBP8.35□□□□□ -1.07
NEDD8-203ENST00000524927 ZCCHC14Q8WYQ9 949 aaKnown RBP8.35□□□□□ -1.07
NEDD8-203ENST00000524927 EXOC2Q96KP1 924 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 EPC1Q9H2F5 836 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 GNL3LQ9NVN8 582 aaKnown RBP8.35□□□□□ -1.07
NEDD8-203ENST00000524927 SMG5Q9UPR3 1016 aaKnown RBP8.35□□□□□ -1.07
NEDD8-203ENST00000524927 Q9Y3F1 56 aa8.35□□□□□ -1.07
NEDD8-203ENST00000524927 DOPEY1Q5JWR5 2465 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 SHISA3A0PJX4 238 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 FSD2A1L4K1 749 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 H0Y8X5 98 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 FGFR1P11362 822 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 PABPC1P11940 636 aaKnown RBP8.34□□□□□ -1.07
NEDD8-203ENST00000524927 AMPD2Q01433 879 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 POU4F1Q01851 419 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 TMEM132BQ14DG7 1078 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 C21orf62-AS1Q17RA5 79 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 TCTN1Q2MV58 587 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 DPY19L1Q2PZI1 675 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 CCDC30Q5VVM6 783 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 NFRKBQ6P4R8 1299 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.34□□□□□ -1.07
NEDD8-203ENST00000524927 LRRC8DQ7L1W4 858 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 VSIG10LQ86VR7 867 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 WFDC3Q8IUB2 231 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 ACER1Q8TDN7 264 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 IER2Q9BTL4 223 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 GPR62Q9BZJ7 368 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 KATNBL1Q9H079 304 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 TRIT1Q9H3H1 467 aaKnown RBP8.34□□□□□ -1.07
NEDD8-203ENST00000524927 ERVK-5Q9HDB9 667 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 GPATCH2Q9NW75 528 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 ZC3H7BQ9UGR2 993 aaKnown RBP8.34□□□□□ -1.07
NEDD8-203ENST00000524927 GMEB2Q9UKD1 530 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 DENND2AQ9ULE3 1009 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 GPR55Q9Y2T6 319 aaPredicted RBP8.34□□□□□ -1.07
NEDD8-203ENST00000524927 MRPS23Q9Y3D9 190 aaKnown RBP8.34□□□□□ -1.07
NEDD8-203ENST00000524927 PCDHGA2Q9Y5H1 932 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 TEX15Q9BXT5 2789 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 MICAL3Q7RTP6 2002 aa8.34□□□□□ -1.07
NEDD8-203ENST00000524927 SIPA1L1O43166 1804 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 WDFY3Q8IZQ1 3526 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 TBC1D4O60343 1298 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 NBNO60934 754 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 LRP3O75074 770 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 GSNP06396 782 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 HSPA5P11021 654 aaKnown RBP8.33□□□□□ -1.08
NEDD8-203ENST00000524927 PPP2R1AP30153 589 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 NRIP1P48552 1158 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 OXCT1P55809 520 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 CAMK1Q14012 370 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 CNGB1Q14028 1251 aaPredicted RBP8.33□□□□□ -1.08
NEDD8-203ENST00000524927 IL31Q6EBC2 164 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 ARMCX2Q7L311 632 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 FILIP1Q7Z7B0 1213 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 MYOCDQ8IZQ8 938 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 POU5F2Q8N7G0 328 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 ATP8B4Q8TF62 1192 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms