RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.04□□□□□ -0.16
CAPN1-202ENST00000524773 ZNF219Q9P2Y4 722 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-202ENST00000524773 UBR3Q6ZT12 1888 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 PLIN4Q96Q06 1357 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 HLA-DOAP06340 250 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 CFHP08603 1231 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 RALAP11233 206 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 CD58P19256 250 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 ZNF131P52739 623 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 RASA3Q14644 834 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 ZFYVE27Q5T4F4 411 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 SYDE2Q5VT97 1194 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 APOBEC3HQ6NTF7 200 aaKnown RBP14.04□□□□□ -0.16
CAPN1-202ENST00000524773 RFWD3Q6PCD5 774 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 LONP2Q86WA8 852 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 PSPC1Q8WXF1 523 aaKnown RBP14.04□□□□□ -0.16
CAPN1-202ENST00000524773 FAM20AQ96MK3 541 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 KLF6Q99612 283 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-202ENST00000524773 DCTN4Q9UJW0 460 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 SLC26A4O43511 780 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 UNC5CO95185 931 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 ATF2P15336 505 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 GAP43P17677 238 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 PCK1P35558 622 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 NBPF20Q3BBV1 942 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 ZNF568Q3ZCX4 644 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 C15orf52Q6ZUT6 534 aaKnown RBP14.04□□□□□ -0.16
CAPN1-202ENST00000524773 SLF2Q8IX21 1173 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 NAF1Q96HR8 494 aaKnown RBP14.04□□□□□ -0.16
CAPN1-202ENST00000524773 SERPINB12Q96P63 405 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 TMEM109Q9BVC6 243 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 WNT8AQ9H1J5 351 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 DBNDD1Q9H9R9 158 aa14.04□□□□□ -0.16
CAPN1-202ENST00000524773 A0A1W2PPM1 405 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 GOLGA8RI6L899 631 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 KRT10P13645 584 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 ATP2B4P23634 1241 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 PKN2Q16513 984 aaKnown RBP14.03□□□□□ -0.16
CAPN1-202ENST00000524773 RHBDF2Q6PJF5 856 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 TRMT10CQ7L0Y3 403 aaKnown RBP14.03□□□□□ -0.16
CAPN1-202ENST00000524773 SH3BP5LQ7L8J4 393 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 FAM13CQ8NE31 585 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 SNF8Q96H20 258 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 IFT74Q96LB3 600 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 RUNDC3BQ96NL0 473 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 NUDCD1Q96RS6 583 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 POLR3CQ9BUI4 534 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-202ENST00000524773 MYH11P35749 1972 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 ARHGEF35A5YM69 484 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 C2orf71A6NGG8 1288 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 PPP1R12AO14974 1030 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-202ENST00000524773 EIF3DO15371 548 aaKnown RBP eCLIP14.03□□□□□ -0.16
CAPN1-202ENST00000524773 SLC16A4O15374 487 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 CYP11B1P15538 503 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 MAPK4P31152 587 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 RPA3P35244 121 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-202ENST00000524773 SATB1Q01826 763 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 AP3B2Q13367 1082 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 BIRC2Q13490 618 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 MTFR1Q15390 333 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 CYFIP1Q7L576 1253 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 GSTA5Q7RTV2 222 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 POMGNT1Q8WZA1 660 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 NAP1L4Q99733 375 aaKnown RBP14.03□□□□□ -0.16
CAPN1-202ENST00000524773 PHTF1Q9UMS5 762 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 ADAMTSL1Q8N6G6 1762 aa14.03□□□□□ -0.16
CAPN1-202ENST00000524773 PEX11AO75192 247 aa14.02□□□□□ -0.16
CAPN1-202ENST00000524773 AP1G2O75843 785 aa14.02□□□□□ -0.16
CAPN1-202ENST00000524773 GH2P01242 217 aa14.02□□□□□ -0.16
CAPN1-202ENST00000524773 SERPINB2P05120 415 aa14.02□□□□□ -0.16
CAPN1-202ENST00000524773 TCF4P15884 667 aa14.02□□□□□ -0.16
CAPN1-202ENST00000524773 MXI1P50539 228 aa14.02□□□□□ -0.16
CAPN1-202ENST00000524773 GRIK3Q13003 919 aa14.02□□□□□ -0.16
CAPN1-202ENST00000524773 CYP1B1Q16678 543 aa14.02□□□□□ -0.16
CAPN1-202ENST00000524773 CCHCR1Q8TD31 782 aa14.02□□□□□ -0.16
CAPN1-202ENST00000524773 PRR11Q96HE9 360 aaPredicted RBP14.02□□□□□ -0.16
CAPN1-202ENST00000524773 RPS6KC1Q96S38 1066 aa14.02□□□□□ -0.16
CAPN1-202ENST00000524773 FHDC1Q9C0D6 1143 aaPredicted RBP14.02□□□□□ -0.16
CAPN1-202ENST00000524773 HSPBP1Q9NZL4 362 aa14.02□□□□□ -0.16
CAPN1-202ENST00000524773 PSMD10O75832 226 aa14.02□□□□□ -0.17
CAPN1-202ENST00000524773 T-ENOLP0DO92 83 aa14.02□□□□□ -0.17
CAPN1-202ENST00000524773 HMGB2P26583 209 aaKnown RBP14.02□□□□□ -0.17
CAPN1-202ENST00000524773 GAD2Q05329 585 aa14.02□□□□□ -0.17
CAPN1-202ENST00000524773 SLC1A5Q15758 541 aa14.02□□□□□ -0.17
CAPN1-202ENST00000524773 IZUMO3Q5VZ72 239 aa14.02□□□□□ -0.17
CAPN1-202ENST00000524773 CDCA2Q69YH5 1023 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-202ENST00000524773 ANO7Q6IWH7 933 aa14.02□□□□□ -0.17
CAPN1-202ENST00000524773 ARMC2Q8NEN0 867 aa14.02□□□□□ -0.17
CAPN1-202ENST00000524773 TAS1R2Q8TE23 839 aa14.02□□□□□ -0.17
CAPN1-202ENST00000524773 ZNF577Q9BSK1 485 aa14.02□□□□□ -0.17
CAPN1-202ENST00000524773 TBC1D10AQ9BXI6 508 aa14.02□□□□□ -0.17
CAPN1-202ENST00000524773 ROPN1BQ9BZX4 212 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-202ENST00000524773 LRRC19Q9H756 370 aa14.02□□□□□ -0.17
CAPN1-202ENST00000524773 ROPN1Q9HAT0 212 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-202ENST00000524773 SAYSD1Q9NPB0 183 aa14.02□□□□□ -0.17
CAPN1-202ENST00000524773 KRT15P19012 456 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 CTCFP49711 727 aaPredicted RBP14.01□□□□□ -0.17
CAPN1-202ENST00000524773 NOP14P78316 857 aaKnown RBP14.01□□□□□ -0.17
CAPN1-202ENST00000524773 EFTUD2Q15029 972 aaKnown RBP eCLIP14.01□□□□□ -0.172e-6■■■■■ 29.3
CAPN1-202ENST00000524773 P3H1Q32P28 736 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms