RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 ACTL7AQ9Y615 435 aa7.67□□□□□ -1.18
CPNE3-206ENST00000523469 MAPKBP1O60336 1514 aa7.67□□□□□ -1.18
CPNE3-206ENST00000523469 SCGB1D2O95969 90 aa7.66□□□□□ -1.18
CPNE3-206ENST00000523469 HK1P19367 917 aa7.66□□□□□ -1.18
CPNE3-206ENST00000523469 SCNN1GP51170 649 aa7.66□□□□□ -1.18
CPNE3-206ENST00000523469 RAB39AQ14964 217 aa7.66□□□□□ -1.18
CPNE3-206ENST00000523469 C1QL3Q5VWW1 255 aa7.66□□□□□ -1.18
CPNE3-206ENST00000523469 EFCAB12Q6NXP0 572 aa7.66□□□□□ -1.18
CPNE3-206ENST00000523469 NSUN6Q8TEA1 469 aaKnown RBP7.66□□□□□ -1.18
CPNE3-206ENST00000523469 TFAP2CQ92754 450 aa7.66□□□□□ -1.18
CPNE3-206ENST00000523469 AIFM3Q96NN9 605 aa7.66□□□□□ -1.18
CPNE3-206ENST00000523469 GTPBP4Q9BZE4 634 aaKnown RBP7.66□□□□□ -1.18
CPNE3-206ENST00000523469 SPON1Q9HCB6 807 aa7.66□□□□□ -1.18
CPNE3-206ENST00000523469 NCANO14594 1321 aa7.66□□□□□ -1.18
CPNE3-206ENST00000523469 SHROOM2Q13796 1616 aa7.66□□□□□ -1.18
CPNE3-206ENST00000523469 KLRG2A4D1S0 409 aaPredicted RBP7.65□□□□□ -1.18
CPNE3-206ENST00000523469 U2AF1L5P0DN76 240 aaPredicted RBP7.65□□□□□ -1.18
CPNE3-206ENST00000523469 ATP5JP18859 108 aa7.65□□□□□ -1.18
CPNE3-206ENST00000523469 MGAT1P26572 445 aa7.65□□□□□ -1.18
CPNE3-206ENST00000523469 CTXN1P60606 82 aa7.65□□□□□ -1.18
CPNE3-206ENST00000523469 U2AF1Q01081 240 aaKnown RBP eCLIP7.65□□□□□ -1.18
CPNE3-206ENST00000523469 DSC2Q02487 901 aa7.65□□□□□ -1.18
CPNE3-206ENST00000523469 TOP2BQ02880 1626 aa7.65□□□□□ -1.18
CPNE3-206ENST00000523469 GTF2H3Q13889 308 aa7.65□□□□□ -1.18
CPNE3-206ENST00000523469 RRP1BQ14684 758 aaKnown RBP7.65□□□□□ -1.18
CPNE3-206ENST00000523469 ATP2B3Q16720 1220 aa7.65□□□□□ -1.18
CPNE3-206ENST00000523469 IFIT1BQ5T764 474 aaKnown RBP7.65□□□□□ -1.18
CPNE3-206ENST00000523469 CATIPQ7Z7H3 387 aa7.65□□□□□ -1.18
CPNE3-206ENST00000523469 TPH2Q8IWU9 490 aa7.65□□□□□ -1.18
CPNE3-206ENST00000523469 IFI44Q8TCB0 444 aa7.65□□□□□ -1.18
CPNE3-206ENST00000523469 RAB24Q969Q5 203 aa7.65□□□□□ -1.18
CPNE3-206ENST00000523469 CLPTM1LQ96KA5 538 aa7.65□□□□□ -1.18
CPNE3-206ENST00000523469 MRGPRX4Q96LA9 322 aa7.65□□□□□ -1.18
CPNE3-206ENST00000523469 CALCOCO1Q9P1Z2 691 aa7.65□□□□□ -1.18
CPNE3-206ENST00000523469 XDHP47989 1333 aa7.64□□□□□ -1.19
CPNE3-206ENST00000523469 OFD1O75665 1012 aa7.64□□□□□ -1.19
CPNE3-206ENST00000523469 ADRB1P08588 477 aa7.64□□□□□ -1.19
CPNE3-206ENST00000523469 LRRC41Q15345 812 aa7.64□□□□□ -1.19
CPNE3-206ENST00000523469 PGS1Q32NB8 556 aa7.64□□□□□ -1.19
CPNE3-206ENST00000523469 FAM102BQ5T8I3 360 aa7.64□□□□□ -1.19
CPNE3-206ENST00000523469 THEMIS2Q5TEJ8 643 aa7.64□□□□□ -1.19
CPNE3-206ENST00000523469 CXorf57Q6NSI4 855 aaKnown RBP7.64□□□□□ -1.19
CPNE3-206ENST00000523469 SEM1Q6ZVN7 128 aa7.64□□□□□ -1.19
CPNE3-206ENST00000523469 PLXDC1Q8IUK5 500 aa7.64□□□□□ -1.19
CPNE3-206ENST00000523469 MAP3K14Q99558 947 aa7.64□□□□□ -1.19
CPNE3-206ENST00000523469 FAM30AQ9NZY2 134 aa7.64□□□□□ -1.19
CPNE3-206ENST00000523469 RUVBL1Q9Y265 456 aaKnown RBP7.64□□□□□ -1.19
CPNE3-206ENST00000523469 FGD5Q6ZNL6 1462 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 PNPLA7Q6ZV29 1317 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 C1QTNF3-AMACRE9PGA6 284 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 TSPAN6O43657 245 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 HSPA6P17066 643 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 CSRP2Q16527 193 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 SPDYAQ5MJ70 313 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 ATAT1Q5SQI0 421 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 ATXN7L2Q5T6C5 722 aaPredicted RBP7.63□□□□□ -1.19
CPNE3-206ENST00000523469 NXNQ6DKJ4 435 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 GADL1Q6ZQY3 521 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 TMPRSS6Q8IU80 811 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 OR10H5Q8NGA6 315 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 HPS3Q969F9 1004 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 PGBD4Q96DM1 585 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 MVB12AQ96EY5 273 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 DMRTA2Q96SC8 542 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 GPR20Q99678 358 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 SLC12A5Q9H2X9 1139 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 NMRK2Q9NPI5 230 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 MAN1C1Q9NR34 630 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 POGKQ9P215 609 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 SLC23A1Q9UHI7 598 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 POLHQ9Y253 713 aa7.63□□□□□ -1.19
CPNE3-206ENST00000523469 SLC16A6O15403 523 aa7.62□□□□□ -1.19
CPNE3-206ENST00000523469 POMCP01189 267 aa7.62□□□□□ -1.19
CPNE3-206ENST00000523469 RAP2BP61225 183 aa7.62□□□□□ -1.19
CPNE3-206ENST00000523469 CREMQ03060 361 aa7.62□□□□□ -1.19
CPNE3-206ENST00000523469 TLE1Q04724 770 aa7.62□□□□□ -1.19
CPNE3-206ENST00000523469 USP39Q53GS9 565 aaKnown RBP7.62□□□□□ -1.19
CPNE3-206ENST00000523469 DACT2Q5SW24 774 aa7.62□□□□□ -1.19
CPNE3-206ENST00000523469 TCEAL8Q8IYN2 117 aa7.62□□□□□ -1.19
CPNE3-206ENST00000523469 RNF169Q8NCN4 708 aa7.62□□□□□ -1.19
CPNE3-206ENST00000523469 NDC1Q9BTX1 674 aa7.62□□□□□ -1.19
CPNE3-206ENST00000523469 C11orf54Q9H0W9 315 aaPredicted RBP7.62□□□□□ -1.19
CPNE3-206ENST00000523469 NOB1Q9ULX3 412 aaKnown RBP7.62□□□□□ -1.19
CPNE3-206ENST00000523469 AP1G1O43747 822 aa7.61□□□□□ -1.19
CPNE3-206ENST00000523469 AMHP03971 560 aa7.61□□□□□ -1.19
CPNE3-206ENST00000523469 LPOP22079 712 aaPredicted RBP7.61□□□□□ -1.19
CPNE3-206ENST00000523469 ZNF529Q6P280 563 aa7.61□□□□□ -1.19
CPNE3-206ENST00000523469 C1orf210Q8IVY1 113 aa7.61□□□□□ -1.19
CPNE3-206ENST00000523469 GRAMD1CQ8IYS0 662 aa7.61□□□□□ -1.19
CPNE3-206ENST00000523469 DCBLD1Q8N8Z6 715 aa7.61□□□□□ -1.19
CPNE3-206ENST00000523469 C3orf20Q8ND61 904 aa7.61□□□□□ -1.19
CPNE3-206ENST00000523469 EXTL1Q92935 676 aa7.61□□□□□ -1.19
CPNE3-206ENST00000523469 CLIP3Q96DZ5 547 aa7.61□□□□□ -1.19
CPNE3-206ENST00000523469 MYOCQ99972 504 aa7.61□□□□□ -1.19
CPNE3-206ENST00000523469 ZNF703Q9H7S9 590 aaPredicted RBP7.61□□□□□ -1.19
CPNE3-206ENST00000523469 GRIN2AQ12879 1464 aa7.61□□□□□ -1.19
CPNE3-206ENST00000523469 ADCY10Q96PN6 1610 aa7.6□□□□□ -1.19
CPNE3-206ENST00000523469 ARIH2O95376 493 aa7.6□□□□□ -1.19
CPNE3-206ENST00000523469 ALAS1P13196 640 aa7.6□□□□□ -1.19
CPNE3-206ENST00000523469 FXR1P51114 621 aaKnown RBP eCLIP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms