RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 PKP3Q9Y446 797 aa13.03□□□□□ -0.32
EXTL3-214ENST00000523271 USP17L12C9JPN9 530 aa13.03□□□□□ -0.32
EXTL3-214ENST00000523271 USP17L21D6R901 530 aa13.03□□□□□ -0.32
EXTL3-214ENST00000523271 YWHAZP63104 245 aaKnown RBP13.03□□□□□ -0.32
EXTL3-214ENST00000523271 PRMT1Q99873 361 aaKnown RBP13.03□□□□□ -0.32
EXTL3-214ENST00000523271 CXorf56Q9H5V9 222 aa13.03□□□□□ -0.32
EXTL3-214ENST00000523271 RIC8BQ9NVN3 520 aa13.03□□□□□ -0.32
EXTL3-214ENST00000523271 SLC9A2Q9UBY0 812 aa13.03□□□□□ -0.32
EXTL3-214ENST00000523271 VAV3Q9UKW4 847 aa13.03□□□□□ -0.32
EXTL3-214ENST00000523271 RIMS2Q9UQ26 1411 aa13.03□□□□□ -0.32
EXTL3-214ENST00000523271 S100A1P23297 94 aa13.02□□□□□ -0.32
EXTL3-214ENST00000523271 CYP4Z1Q86W10 505 aa13.02□□□□□ -0.32
EXTL3-214ENST00000523271 IFNL3Q8IZI9 196 aa13.02□□□□□ -0.32
EXTL3-214ENST00000523271 PROM2Q8N271 834 aa13.02□□□□□ -0.32
EXTL3-214ENST00000523271 CCDC17Q96LX7 622 aa13.02□□□□□ -0.32
EXTL3-214ENST00000523271 CLIC6Q96NY7 704 aa13.02□□□□□ -0.32
EXTL3-214ENST00000523271 MLXIPLQ9NP71 852 aa13.02□□□□□ -0.32
EXTL3-214ENST00000523271 ABCA5Q8WWZ7 1642 aa13.02□□□□□ -0.32
EXTL3-214ENST00000523271 TNKSO95271 1327 aa13.02□□□□□ -0.32
EXTL3-214ENST00000523271 FAM187AA6NFU0 413 aa13.02□□□□□ -0.32
EXTL3-214ENST00000523271 ECSITQ9BQ95 431 aa13.02□□□□□ -0.32
EXTL3-214ENST00000523271 RNF26Q9BY78 433 aaPredicted RBP13.02□□□□□ -0.32
EXTL3-214ENST00000523271 RANBP17Q9H2T7 1088 aaKnown RBP13.02□□□□□ -0.32
EXTL3-214ENST00000523271 NDST4Q9H3R1 872 aa13.02□□□□□ -0.32
EXTL3-214ENST00000523271 HMG20AQ9NP66 347 aa13.02□□□□□ -0.32
EXTL3-214ENST00000523271 DFFAO00273 331 aa13.02□□□□□ -0.32
EXTL3-214ENST00000523271 CCT3P49368 545 aaKnown RBP13.02□□□□□ -0.32
EXTL3-214ENST00000523271 OSTNP61366 133 aa13.02□□□□□ -0.32
EXTL3-214ENST00000523271 SNX31Q8N9S9 440 aa13.02□□□□□ -0.32
EXTL3-214ENST00000523271 NUP85Q9BW27 656 aa13.02□□□□□ -0.32
EXTL3-214ENST00000523271 PRAG1Q86YV5 1406 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 ZNF518AQ6AHZ1 1483 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 PNMA8CA0A1B0GUJ8 204 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 PRR23AA6NEV1 266 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 ABCB1P08183 1280 aaPredicted RBP13.02□□□□□ -0.33
EXTL3-214ENST00000523271 HOXB7P09629 217 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 RSBN1Q5VWQ0 802 aaPredicted RBP13.02□□□□□ -0.33
EXTL3-214ENST00000523271 CMTR1Q8N1G2 835 aaKnown RBP13.02□□□□□ -0.33
EXTL3-214ENST00000523271 CYP4Z2PQ8N1L4 340 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 TRIM51Q9BSJ1 452 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 CNOT8Q9UFF9 292 aaKnown RBP13.02□□□□□ -0.33
EXTL3-214ENST00000523271 CLIC4Q9Y696 253 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 ATP5JP18859 108 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 ANKRD40Q6AI12 368 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 YAF2Q8IY57 180 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 PHACTR1Q9C0D0 580 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 NPHS2Q9NP85 383 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 MTO1Q9Y2Z2 717 aaKnown RBP13.02□□□□□ -0.33
EXTL3-214ENST00000523271 A0A0B4J269 797 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 TUBB3Q13509 450 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 VSTM4Q8IW00 320 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 SCN4BQ8IWT1 228 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 MXD3Q9BW11 206 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 TTC7AQ9ULT0 858 aaPredicted RBP13.02□□□□□ -0.33
EXTL3-214ENST00000523271 RALAP11233 206 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 ACADSP16219 412 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 FEN1P39748 380 aaKnown RBP13.02□□□□□ -0.33
EXTL3-214ENST00000523271 NT5C2P49902 561 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 ARHGDIBP52566 201 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 RPS7P62081 194 aaKnown RBP13.02□□□□□ -0.33
EXTL3-214ENST00000523271 ARMC6Q6NXE6 501 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 PDXDC2PQ6P474 469 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 BEST2Q8NFU1 509 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 VMP1Q96GC9 406 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 THTPAQ9BU02 230 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 CEP72Q9P209 647 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 KLHL3Q9UH77 587 aa13.02□□□□□ -0.33
EXTL3-214ENST00000523271 MAPKBP1O60336 1514 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 DYNC1LI2O43237 492 aaPredicted RBP13.01□□□□□ -0.33
EXTL3-214ENST00000523271 YWHABP31946 246 aaKnown RBP13.01□□□□□ -0.33
EXTL3-214ENST00000523271 PRIM2P49643 509 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 LRRC24Q50LG9 513 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 C2CD6Q53TS8 623 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 IL17RAQ96F46 866 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 ADI1Q9BV57 179 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 SNX24Q9Y343 169 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 AATKQ6ZMQ8 1374 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 PSMD12O00232 456 aaPredicted RBP13.01□□□□□ -0.33
EXTL3-214ENST00000523271 PGBD4Q96DM1 585 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 TMCC3Q9ULS5 477 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 IPPQ9Y573 584 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 TAF4O00268 1085 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 ALDH1A1P00352 501 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 MARK3P27448 753 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 ZAP70P43403 619 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 SLC39A14Q15043 492 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 TRIP10Q15642 601 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 EDRF1Q3B7T1 1238 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 UXS1Q8NBZ7 420 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 APOL4Q9BPW4 351 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 MAN1B1Q9UKM7 699 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 KPNA4O00629 521 aaPredicted RBP13.01□□□□□ -0.33
EXTL3-214ENST00000523271 RNMTO43148 476 aaKnown RBP13.01□□□□□ -0.33
EXTL3-214ENST00000523271 CAND2O75155 1236 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 DCTN2Q13561 401 aaKnown RBP13.01□□□□□ -0.33
EXTL3-214ENST00000523271 P3H1Q32P28 736 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 COBLL1Q53SF7 1204 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 ENKURQ8TC29 256 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 RGS18Q9NS28 235 aa13.01□□□□□ -0.33
EXTL3-214ENST00000523271 RGS12O14924 1447 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms