RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 KREMEN2Q8NCW0 462 aa20.44■□□□□ 0.86
SPIDR-220ENST00000522900 SNX21Q969T3 373 aa20.44■□□□□ 0.86
SPIDR-220ENST00000522900 ZNF707Q96C28 371 aaPredicted RBP20.44■□□□□ 0.86
SPIDR-220ENST00000522900 UROC1Q96N76 676 aa20.44■□□□□ 0.86
SPIDR-220ENST00000522900 FIZ1Q96SL8 496 aa20.44■□□□□ 0.86
SPIDR-220ENST00000522900 SMOC2Q9H3U7 446 aa20.44■□□□□ 0.86
SPIDR-220ENST00000522900 CNTN3Q9P232 1028 aa20.44■□□□□ 0.86
SPIDR-220ENST00000522900 TBX20Q9UMR3 447 aa20.44■□□□□ 0.86
SPIDR-220ENST00000522900 HCN4Q9Y3Q4 1203 aa20.44■□□□□ 0.86
SPIDR-220ENST00000522900 H0YCG3 227 aa20.43■□□□□ 0.86
SPIDR-220ENST00000522900 CLDN3O15551 220 aa20.43■□□□□ 0.86
SPIDR-220ENST00000522900 TRAK2O60296 914 aa20.43■□□□□ 0.86
SPIDR-220ENST00000522900 NMT1P30419 496 aaKnown RBP20.43■□□□□ 0.86
SPIDR-220ENST00000522900 CREMQ03060 361 aa20.43■□□□□ 0.86
SPIDR-220ENST00000522900 ELAVL2Q12926 359 aaKnown RBP20.43■□□□□ 0.86
SPIDR-220ENST00000522900 RSPO2Q6UXX9 243 aaPredicted RBP20.43■□□□□ 0.86
SPIDR-220ENST00000522900 ZDHHC14Q8IZN3 488 aa20.43■□□□□ 0.86
SPIDR-220ENST00000522900 HDAC7Q8WUI4 952 aa20.43■□□□□ 0.86
SPIDR-220ENST00000522900 BICD1Q96G01 975 aa20.43■□□□□ 0.86
SPIDR-220ENST00000522900 PLEKHA4Q9H4M7 779 aa20.43■□□□□ 0.86
SPIDR-220ENST00000522900 PARVGQ9HBI0 331 aa20.43■□□□□ 0.86
SPIDR-220ENST00000522900 DPP7Q9UHL4 492 aa20.43■□□□□ 0.86
SPIDR-220ENST00000522900 USTQ9Y2C2 406 aa20.43■□□□□ 0.86
SPIDR-220ENST00000522900 PLXNA3P51805 1871 aa20.43■□□□□ 0.86
SPIDR-220ENST00000522900 K7ENM7 598 aa20.42■□□□□ 0.86
SPIDR-220ENST00000522900 PODXLO00592 558 aa20.42■□□□□ 0.86
SPIDR-220ENST00000522900 N4BP1O75113 896 aaKnown RBP20.42■□□□□ 0.86
SPIDR-220ENST00000522900 C1RP00736 705 aa20.42■□□□□ 0.86
SPIDR-220ENST00000522900 TKTP29401 623 aaKnown RBP20.42■□□□□ 0.86
SPIDR-220ENST00000522900 TNFSF9P41273 254 aa20.42■□□□□ 0.86
SPIDR-220ENST00000522900 MATR3P43243 847 aaKnown RBP eCLIP20.42■□□□□ 0.862e-8■■■■■ 27.6
SPIDR-220ENST00000522900 SPAG1Q07617 926 aa20.42■□□□□ 0.86
SPIDR-220ENST00000522900 SLC39A14Q15043 492 aa20.42■□□□□ 0.86
SPIDR-220ENST00000522900 ZBTB41Q5SVQ8 909 aa20.42■□□□□ 0.86
SPIDR-220ENST00000522900 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.42■□□□□ 0.86
SPIDR-220ENST00000522900 CCDC149Q6ZUS6 474 aa20.42■□□□□ 0.86
SPIDR-220ENST00000522900 SMG7Q92540 1137 aaKnown RBP20.42■□□□□ 0.86
SPIDR-220ENST00000522900 KCNN1Q92952 543 aa20.42■□□□□ 0.86
SPIDR-220ENST00000522900 PBXIP1Q96AQ6 731 aa20.42■□□□□ 0.86
SPIDR-220ENST00000522900 ASIC4Q96FT7 647 aa20.42■□□□□ 0.86
SPIDR-220ENST00000522900 DDX27Q96GQ7 796 aaKnown RBP20.42■□□□□ 0.86
SPIDR-220ENST00000522900 PANK2Q9BZ23 570 aa20.42■□□□□ 0.86
SPIDR-220ENST00000522900 ZSCAN16Q9H4T2 348 aaPredicted RBP20.42■□□□□ 0.86
SPIDR-220ENST00000522900 SLC38A7Q9NVC3 462 aa20.42■□□□□ 0.86
SPIDR-220ENST00000522900 GTF3C3Q9Y5Q9 886 aa20.42■□□□□ 0.86
SPIDR-220ENST00000522900 PAPLNO95428 1278 aa20.41■□□□□ 0.86
SPIDR-220ENST00000522900 CXCL8P10145 99 aa20.41■□□□□ 0.86
SPIDR-220ENST00000522900 LIG4P49917 911 aa20.41■□□□□ 0.86
SPIDR-220ENST00000522900 SIGLEC14Q08ET2 396 aa20.41■□□□□ 0.86
SPIDR-220ENST00000522900 ZC2HC1CQ53FD0 456 aaPredicted RBP20.41■□□□□ 0.86
SPIDR-220ENST00000522900 RRAGBQ5VZM2 374 aa20.41■□□□□ 0.86
SPIDR-220ENST00000522900 SLC39A4Q6P5W5 647 aa20.41■□□□□ 0.86
SPIDR-220ENST00000522900 ELMSAN1Q6PJG2 1045 aa20.41■□□□□ 0.86
SPIDR-220ENST00000522900 DYMQ7RTS9 669 aa20.41■□□□□ 0.86
SPIDR-220ENST00000522900 BMP8AQ7Z5Y6 402 aa20.41■□□□□ 0.86
SPIDR-220ENST00000522900 PLCD3Q8N3E9 789 aa20.41■□□□□ 0.86
SPIDR-220ENST00000522900 PRKD2Q9BZL6 878 aa20.41■□□□□ 0.86
SPIDR-220ENST00000522900 WDR6Q9NNW5 1121 aaKnown RBP20.41■□□□□ 0.86
SPIDR-220ENST00000522900 TFIP11Q9UBB9 837 aaKnown RBP20.41■□□□□ 0.86
SPIDR-220ENST00000522900 CCDC39Q9UFE4 941 aa20.41■□□□□ 0.86
SPIDR-220ENST00000522900 A0A087X0B3 334 aa20.4■□□□□ 0.86
SPIDR-220ENST00000522900 TBCAO75347 108 aaKnown RBP20.4■□□□□ 0.86
SPIDR-220ENST00000522900 TECTAO75443 2155 aa20.4■□□□□ 0.86
SPIDR-220ENST00000522900 ZMYND10O75800 440 aa20.4■□□□□ 0.86
SPIDR-220ENST00000522900 PIGRP01833 764 aa20.4■□□□□ 0.86
SPIDR-220ENST00000522900 OR1D2P34982 312 aa20.4■□□□□ 0.86
SPIDR-220ENST00000522900 FOXD4L5Q5VV16 416 aaPredicted RBP20.4■□□□□ 0.86
SPIDR-220ENST00000522900 CYP26C1Q6V0L0 522 aa20.4■□□□□ 0.86
SPIDR-220ENST00000522900 OTOP3Q7RTS5 596 aa20.4■□□□□ 0.86
SPIDR-220ENST00000522900 FOXD4L4Q8WXT5 416 aaPredicted RBP20.4■□□□□ 0.86
SPIDR-220ENST00000522900 RHOBTB2Q9BYZ6 727 aa20.4■□□□□ 0.86
SPIDR-220ENST00000522900 IKZF4Q9H2S9 585 aa20.4■□□□□ 0.86
SPIDR-220ENST00000522900 ZDHHC7Q9NXF8 308 aa20.4■□□□□ 0.86
SPIDR-220ENST00000522900 MTRRQ9UBK8 725 aa20.4■□□□□ 0.86
SPIDR-220ENST00000522900 STK17AQ9UEE5 414 aa20.4■□□□□ 0.86
SPIDR-220ENST00000522900 TUBGCP4Q9UGJ1 667 aa20.4■□□□□ 0.86
SPIDR-220ENST00000522900 FBXW11Q9UKB1 542 aa20.4■□□□□ 0.86
SPIDR-220ENST00000522900 SORCS3Q9UPU3 1222 aa20.4■□□□□ 0.86
SPIDR-220ENST00000522900 TTC26A0AVF1 554 aa20.39■□□□□ 0.85
SPIDR-220ENST00000522900 MYMKA6NI61 221 aa20.39■□□□□ 0.85
SPIDR-220ENST00000522900 ANKRD63C9JTQ0 380 aa20.39■□□□□ 0.85
SPIDR-220ENST00000522900 HNRNPDLO14979 420 aaKnown RBP20.39■□□□□ 0.85
SPIDR-220ENST00000522900 TRAPPC3O43617 180 aa20.39■□□□□ 0.85
SPIDR-220ENST00000522900 FAM189A1O60320 539 aa20.39■□□□□ 0.85
SPIDR-220ENST00000522900 CLTAP09496 248 aa20.39■□□□□ 0.85
SPIDR-220ENST00000522900 GTF2BQ00403 316 aa20.39■□□□□ 0.85
SPIDR-220ENST00000522900 RAB33AQ14088 237 aa20.39■□□□□ 0.85
SPIDR-220ENST00000522900 PDXDC1Q6P996 788 aa20.39■□□□□ 0.85
SPIDR-220ENST00000522900 KRI1Q8N9T8 703 aaKnown RBP20.39■□□□□ 0.85
SPIDR-220ENST00000522900 DDX12PQ92771 950 aa20.39■□□□□ 0.85
SPIDR-220ENST00000522900 ACSF2Q96CM8 615 aaPredicted RBP20.39■□□□□ 0.85
SPIDR-220ENST00000522900 MFSD14AQ96MC6 490 aa20.39■□□□□ 0.85
SPIDR-220ENST00000522900 PIDD1Q9HB75 910 aa20.39■□□□□ 0.85
SPIDR-220ENST00000522900 ARIH1Q9Y4X5 557 aaPredicted RBP20.39■□□□□ 0.85
SPIDR-220ENST00000522900 CDY1Q9Y6F8 540 aa20.39■□□□□ 0.85
SPIDR-220ENST00000522900 MORC2Q9Y6X9 1032 aaPredicted RBP20.39■□□□□ 0.85
SPIDR-220ENST00000522900 CLUHO75153 1309 aa20.38■□□□□ 0.85
SPIDR-220ENST00000522900 A0A0B4J269 797 aa20.38■□□□□ 0.85
SPIDR-220ENST00000522900 LACTBL1A8MY62 500 aa20.38■□□□□ 0.85
SPIDR-220ENST00000522900 TISP43B9A030 160 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms