RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 LRIG2O94898 1065 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 INHBBP09529 407 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 KCNC3Q14003 757 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 HSDL1Q3SXM5 330 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 CDKAL1Q5VV42 579 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 ERICH6BQ5W0A0 696 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 MCTP2Q6DN12 878 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 SYCE2Q6PIF2 218 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 ARMCX6Q7L4S7 300 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 KIAA2013Q8IYS2 634 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 CLASRPQ8N2M8 674 aaKnown RBP7.75□□□□□ -1.17
SDCBP-210ENST00000522843 PPTC7Q8NI37 304 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 POF1BQ8WVV4 589 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 LINC01599Q8WXQ3 324 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 P2RX5Q93086 422 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 TAAR1Q96RJ0 339 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 KATNAL1Q9BW62 490 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 RALYQ9UKM9 306 aaKnown RBP7.75□□□□□ -1.17
SDCBP-210ENST00000522843 STX8Q9UNK0 236 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.75□□□□□ -1.17
SDCBP-210ENST00000522843 RWDD3Q9Y3V2 267 aa7.75□□□□□ -1.17
SDCBP-210ENST00000522843 SUPT16HQ9Y5B9 1047 aaKnown RBP7.75□□□□□ -1.17
SDCBP-210ENST00000522843 ENPP3O14638 875 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 GIPC1O14908 333 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 FOXP2O15409 715 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 GPAA1O43292 621 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 CHRNA1P02708 482 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 IFIT2P09913 472 aaKnown RBP7.74□□□□□ -1.17
SDCBP-210ENST00000522843 MED14OSP0DP75 135 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 TDO2P48775 406 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 BTG3Q14201 252 aaPredicted RBP7.74□□□□□ -1.17
SDCBP-210ENST00000522843 PUM1Q14671 1186 aaKnown RBP eCLIP7.74□□□□□ -1.17
SDCBP-210ENST00000522843 CCDC96Q2M329 555 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 C22orf34Q6ZV56 151 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 SIRT2Q8IXJ6 389 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 DHX37Q8IY37 1157 aaKnown RBP7.74□□□□□ -1.17
SDCBP-210ENST00000522843 IFNL3Q8IZI9 196 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 SYTL5Q8TDW5 730 aaPredicted RBP7.74□□□□□ -1.17
SDCBP-210ENST00000522843 DCAF4Q8WV16 495 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 ATP6V0A1Q93050 837 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 APOL5Q9BWW9 433 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 GZF1Q9H116 711 aaPredicted RBP7.74□□□□□ -1.17
SDCBP-210ENST00000522843 BCL11AQ9H165 835 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 EPB41L4BQ9H329 900 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 RNPEPQ9H4A4 650 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 BCAS3Q9H6U6 928 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 C12orf49Q9H741 205 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 EHMT1Q9H9B1 1298 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 PPM1HQ9ULR3 514 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 SAMM50Q9Y512 469 aa7.74□□□□□ -1.17
SDCBP-210ENST00000522843 PKD1L2Q7Z442 2459 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 C17orf102A2RUQ5 167 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 TCAF2A6NFQ2 919 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 C2CD4DB7Z1M9 353 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 CAND2O75155 1236 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 SLITRK5O94991 958 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 ASGR2P07307 311 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 CELA3AP09093 270 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 USP17L7P0C7H9 530 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 SMIM10L2AP0DMW4 78 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 SMIM10L2BP0DMW5 78 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 CLCN5P51795 746 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 ERVFC1P60507 584 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 ADAM17P78536 824 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 SP2Q02086 613 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 PPARAQ07869 468 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 MGAT3Q09327 533 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 ANGPT1Q15389 498 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 DUSP6Q16828 381 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 SFRP5Q5T4F7 317 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 ZKSCAN2Q63HK3 967 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 RTN4RL1Q86UN2 441 aaPredicted RBP7.73□□□□□ -1.17
SDCBP-210ENST00000522843 CCDC105Q8IYK2 499 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 MFSD4AQ8N468 514 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 RGS22Q8NE09 1264 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 ZNF507Q8TCN5 953 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 APBB2Q92870 758 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 KIF1BPQ96EK5 621 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 ALPK1Q96QP1 1244 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 CEP44Q9C0F1 390 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 KCNK12Q9HB15 430 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 ZNF287Q9HBT7 754 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 RNF19AQ9NV58 838 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 SORCS3Q9UPU3 1222 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 TELO2Q9Y4R8 837 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 WDR19Q8NEZ3 1342 aa7.73□□□□□ -1.17
SDCBP-210ENST00000522843 H3BS24 57 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 PPFIA4O75335 1185 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 GHRP10912 638 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 PDHBP11177 359 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 GLDCP23378 1020 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 GATMP50440 423 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 LPIN1Q14693 890 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 USH1GQ495M9 461 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 NAALADL2Q58DX5 795 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 CELF3Q5SZQ8 465 aaKnown RBP7.72□□□□□ -1.17
SDCBP-210ENST00000522843 ZSCAN25Q6NSZ9 544 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 ANKRD54Q6NXT1 300 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 TMEM184AQ6ZMB5 413 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 ITPRIPQ8IWB1 547 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms