RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 KIAA1841Q6NSI8 718 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 ANKRD54Q6NXT1 300 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 DCLRE1AQ6PJP8 1040 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 PPFIBP1Q86W92 1011 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 SLC22A17Q8WUG5 538 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 CASP10Q92851 521 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 DDX27Q96GQ7 796 aaKnown RBP17.88■□□□□ 0.45
PABPC1-221ENST00000522720 C7orf25Q9BPX7 421 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 RXFP1Q9HBX9 757 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 PCDHB13Q9Y5F0 798 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 STYXL1Q9Y6J8 313 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 SF3B1O75533 1304 aaKnown RBP eCLIP17.88■□□□□ 0.456e-6■■■■■ 43.4
PABPC1-221ENST00000522720 PDCD11Q14690 1871 aaKnown RBP17.88■□□□□ 0.45
PABPC1-221ENST00000522720 TTC26A0AVF1 554 aa17.87■□□□□ 0.45
PABPC1-221ENST00000522720 C2CD2LO14523 706 aa17.87■□□□□ 0.45
PABPC1-221ENST00000522720 B3GAT3O94766 335 aa17.87■□□□□ 0.45
PABPC1-221ENST00000522720 GCNT3O95395 438 aa17.87■□□□□ 0.45
PABPC1-221ENST00000522720 CXCL8P10145 99 aa17.87■□□□□ 0.45
PABPC1-221ENST00000522720 KLRC2P26717 231 aa17.87■□□□□ 0.45
PABPC1-221ENST00000522720 CLCNKBP51801 687 aa17.87■□□□□ 0.45
PABPC1-221ENST00000522720 SOX4Q06945 474 aaPredicted RBP17.87■□□□□ 0.45
PABPC1-221ENST00000522720 ALCAMQ13740 583 aa17.87■□□□□ 0.45
PABPC1-221ENST00000522720 SLFN12LQ6IEE8 588 aa17.87■□□□□ 0.45
PABPC1-221ENST00000522720 SYCE2Q6PIF2 218 aa17.87■□□□□ 0.45
PABPC1-221ENST00000522720 HASPINQ8TF76 798 aa17.87■□□□□ 0.45
PABPC1-221ENST00000522720 ACCSQ96QU6 501 aa17.87■□□□□ 0.45
PABPC1-221ENST00000522720 MSTO1Q9BUK6 570 aa17.87■□□□□ 0.45
PABPC1-221ENST00000522720 SCAND2PQ9GZW5 306 aaPredicted RBP17.87■□□□□ 0.45
PABPC1-221ENST00000522720 GOLGA2P5Q9HBQ8 144 aa17.87■□□□□ 0.45
PABPC1-221ENST00000522720 EXOC7Q9UPT5 735 aa17.87■□□□□ 0.45
PABPC1-221ENST00000522720 MUC3AQ02505 3323 aa17.87■□□□□ 0.45
PABPC1-221ENST00000522720 TISP43B9A030 160 aa17.86■□□□□ 0.45
PABPC1-221ENST00000522720 TNFRSF10AO00220 468 aa17.86■□□□□ 0.45
PABPC1-221ENST00000522720 TEX28O15482 410 aa17.86■□□□□ 0.45
PABPC1-221ENST00000522720 ADRB2P07550 413 aa17.86■□□□□ 0.45
PABPC1-221ENST00000522720 TNFSF9P41273 254 aa17.86■□□□□ 0.45
PABPC1-221ENST00000522720 CASP5P51878 434 aa17.86■□□□□ 0.45
PABPC1-221ENST00000522720 NUCB2P80303 420 aa17.86■□□□□ 0.45
PABPC1-221ENST00000522720 KCNA1Q09470 495 aa17.86■□□□□ 0.45
PABPC1-221ENST00000522720 ELAVL2Q12926 359 aaKnown RBP17.86■□□□□ 0.45
PABPC1-221ENST00000522720 ENOX2Q16206 610 aaKnown RBP17.86■□□□□ 0.45
PABPC1-221ENST00000522720 ZBTB41Q5SVQ8 909 aa17.86■□□□□ 0.45
PABPC1-221ENST00000522720 L1TD1Q5T7N2 865 aaKnown RBP17.86■□□□□ 0.45
PABPC1-221ENST00000522720 FAM171A1Q5VUB5 890 aa17.86■□□□□ 0.45
PABPC1-221ENST00000522720 CD300LGQ6UXG3 332 aa17.86■□□□□ 0.45
PABPC1-221ENST00000522720 C18orf25Q96B23 403 aaPredicted RBP17.86■□□□□ 0.45
PABPC1-221ENST00000522720 B3GALT6Q96L58 329 aa17.86■□□□□ 0.45
PABPC1-221ENST00000522720 S1PR5Q9H228 398 aa17.86■□□□□ 0.45
PABPC1-221ENST00000522720 IKZF4Q9H2S9 585 aa17.86■□□□□ 0.45
PABPC1-221ENST00000522720 PRKAG3Q9UGI9 489 aa17.86■□□□□ 0.45
PABPC1-221ENST00000522720 CPSF3Q9UKF6 684 aaKnown RBP17.86■□□□□ 0.45
PABPC1-221ENST00000522720 C5orf42Q9H799 3197 aa17.86■□□□□ 0.45
PABPC1-221ENST00000522720 ADH1AP07327 375 aa17.85■□□□□ 0.45
PABPC1-221ENST00000522720 SLFN14P0C7P3 912 aa17.85■□□□□ 0.45
PABPC1-221ENST00000522720 MYBP10242 640 aa17.85■□□□□ 0.45
PABPC1-221ENST00000522720 EPCAMP16422 314 aa17.85■□□□□ 0.45
PABPC1-221ENST00000522720 IGFBP6P24592 240 aaPredicted RBP17.85■□□□□ 0.45
PABPC1-221ENST00000522720 RPL9P32969 192 aaKnown RBP17.85■□□□□ 0.45
PABPC1-221ENST00000522720 CLCN4P51793 760 aa17.85■□□□□ 0.45
PABPC1-221ENST00000522720 ASIC1P78348 528 aa17.85■□□□□ 0.45
PABPC1-221ENST00000522720 POSTNQ15063 836 aa17.85■□□□□ 0.45
PABPC1-221ENST00000522720 TPRNQ4KMQ1 711 aa17.85■□□□□ 0.45
PABPC1-221ENST00000522720 RIN2Q8WYP3 895 aaPredicted RBP17.85■□□□□ 0.45
PABPC1-221ENST00000522720 TSPAN18Q96SJ8 248 aa17.85■□□□□ 0.45
PABPC1-221ENST00000522720 TTPALQ9BTX7 342 aa17.85■□□□□ 0.45
PABPC1-221ENST00000522720 FGFBP2Q9BYJ0 223 aa17.85■□□□□ 0.45
PABPC1-221ENST00000522720 RPF1Q9H9Y2 349 aaKnown RBP17.85■□□□□ 0.45
PABPC1-221ENST00000522720 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.85■□□□□ 0.454e-14■■□□□ 11.8
PABPC1-221ENST00000522720 DZANK1Q9NVP4 752 aa17.85■□□□□ 0.45
PABPC1-221ENST00000522720 FNIP2Q9P278 1114 aa17.85■□□□□ 0.45
PABPC1-221ENST00000522720 AGO2Q9UKV8 859 aaKnown RBP17.85■□□□□ 0.45
PABPC1-221ENST00000522720 USP15Q9Y4E8 981 aaPredicted RBP17.85■□□□□ 0.45
PABPC1-221ENST00000522720 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.85■□□□□ 0.45
PABPC1-221ENST00000522720 VWA8A3KMH1 1905 aa17.84■□□□□ 0.45
PABPC1-221ENST00000522720 A0A1B0GVL5 298 aa17.84■□□□□ 0.45
PABPC1-221ENST00000522720 LACTBL1A8MY62 500 aa17.84■□□□□ 0.45
PABPC1-221ENST00000522720 TRAPPC3O43617 180 aa17.84■□□□□ 0.45
PABPC1-221ENST00000522720 PFKFB1P16118 471 aa17.84■□□□□ 0.45
PABPC1-221ENST00000522720 ADSSP30520 456 aa17.84■□□□□ 0.45
PABPC1-221ENST00000522720 ANP32AP39687 249 aaKnown RBP17.84■□□□□ 0.45
PABPC1-221ENST00000522720 PPP2R3AQ06190 1150 aa17.84■□□□□ 0.45
PABPC1-221ENST00000522720 ZBTB6Q15916 424 aa17.84■□□□□ 0.45
PABPC1-221ENST00000522720 RTP2Q5QGT7 225 aa17.84■□□□□ 0.45
PABPC1-221ENST00000522720 ADHFE1Q8IWW8 467 aa17.84■□□□□ 0.45
PABPC1-221ENST00000522720 CEP57L1Q8IYX8 460 aa17.84■□□□□ 0.45
PABPC1-221ENST00000522720 C3orf58Q8NDZ4 430 aa17.84■□□□□ 0.45
PABPC1-221ENST00000522720 POMGNT1Q8WZA1 660 aa17.84■□□□□ 0.45
PABPC1-221ENST00000522720 SUSD6Q92537 303 aa17.84■□□□□ 0.45
PABPC1-221ENST00000522720 USP25Q9UHP3 1055 aa17.84■□□□□ 0.45
PABPC1-221ENST00000522720 SERTAD1Q9UHV2 236 aa17.84■□□□□ 0.45
PABPC1-221ENST00000522720 HPSEQ9Y251 543 aa17.84■□□□□ 0.45
PABPC1-221ENST00000522720 FAM237AA0A1B0GTK4 181 aa17.83■□□□□ 0.44
PABPC1-221ENST00000522720 PODXLO00592 558 aa17.83■□□□□ 0.44
PABPC1-221ENST00000522720 ACTN4O43707 911 aaKnown RBP17.83■□□□□ 0.44
PABPC1-221ENST00000522720 C1RP00736 705 aa17.83■□□□□ 0.44
PABPC1-221ENST00000522720 FGFR3P22607 806 aa17.83■□□□□ 0.44
PABPC1-221ENST00000522720 AFMP43652 599 aa17.83■□□□□ 0.44
PABPC1-221ENST00000522720 ACOT2P49753 483 aa17.83■□□□□ 0.44
PABPC1-221ENST00000522720 POU5F1Q01860 360 aaKnown RBP17.83■□□□□ 0.44
PABPC1-221ENST00000522720 CREMQ03060 361 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms