RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 CTIFO43310 598 aaKnown RBP17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 ASMTLO95671 621 aa17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 INPP1P49441 399 aa17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 LRRC71Q8N4P6 559 aa17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 SCAF8Q9UPN6 1271 aaKnown RBP17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 DCTN3O75935 186 aa17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 TCF7P36402 384 aaPredicted RBP17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 FMO5P49326 533 aa17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 ZNF211Q13398 564 aaPredicted RBP17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 BFSP2Q13515 415 aa17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 PDE1CQ14123 709 aaPredicted RBP17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 CLEC17AQ6ZS10 378 aa17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 APOBEC2Q9Y235 224 aaKnown RBP17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 NPHP3-ACAD11A0A0J9YXS1 232 aa17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 EIF3DO15371 548 aaKnown RBP eCLIP17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 ANP32DO95626 131 aa17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 PDGFRBP09619 1106 aa17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 NLRP11P59045 1033 aaKnown RBP17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 RBBP8NLQ8NC74 664 aaPredicted RBP17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 TAAR1Q96RJ0 339 aa17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 SUDS3Q9H7L9 328 aaPredicted RBP17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 RRP15Q9Y3B9 282 aaKnown RBP17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 PITPNM2Q9BZ72 1349 aa17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 GPR182O15218 404 aa17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 CCNYL1Q8N7R7 359 aa17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 TSSK1BQ9BXA7 367 aa17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 FRMPD1Q5SYB0 1578 aa17.14■□□□□ 0.34
PCDHA3-201ENST00000522353 LBRQ14739 615 aaKnown RBP17.14■□□□□ 0.34
PCDHA3-201ENST00000522353 FAM133BQ5BKY9 247 aaKnown RBP17.14■□□□□ 0.34
PCDHA3-201ENST00000522353 CCDC138Q96M89 665 aa17.14■□□□□ 0.34
PCDHA3-201ENST00000522353 MKNK1Q9BUB5 465 aa17.14■□□□□ 0.34
PCDHA3-201ENST00000522353 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.14■□□□□ 0.34
PCDHA3-201ENST00000522353 ANGPTL2Q9UKU9 493 aa17.14■□□□□ 0.34
PCDHA3-201ENST00000522353 ADAMTS13Q76LX8 1427 aa17.14■□□□□ 0.33
PCDHA3-201ENST00000522353 ABCA6Q8N139 1617 aa17.14■□□□□ 0.33
PCDHA3-201ENST00000522353 SUPT20HL2P0C7V6 817 aa17.14■□□□□ 0.33
PCDHA3-201ENST00000522353 PPP1R2P1Q96PQ5 205 aa17.14■□□□□ 0.33
PCDHA3-201ENST00000522353 PITPNM3Q9BZ71 974 aa17.14■□□□□ 0.33
PCDHA3-201ENST00000522353 KRT82Q9NSB4 513 aa17.14■□□□□ 0.33
PCDHA3-201ENST00000522353 UBQLN1Q9UMX0 589 aaKnown RBP17.14■□□□□ 0.33
PCDHA3-201ENST00000522353 RHOBTB3O94955 611 aa17.14■□□□□ 0.33
PCDHA3-201ENST00000522353 TAF6P49848 677 aa17.14■□□□□ 0.33
PCDHA3-201ENST00000522353 TRAIPQ9BWF2 469 aa17.14■□□□□ 0.33
PCDHA3-201ENST00000522353 THPOP40225 353 aa17.14■□□□□ 0.33
PCDHA3-201ENST00000522353 ZNF484Q5JVG2 852 aa17.14■□□□□ 0.33
PCDHA3-201ENST00000522353 HABP4Q5JVS0 413 aaKnown RBP17.14■□□□□ 0.33
PCDHA3-201ENST00000522353 FOPNLQ96NB1 174 aa17.14■□□□□ 0.33
PCDHA3-201ENST00000522353 SRGNP10124 158 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 GCKP35557 465 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 RGS7P49802 495 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 TBCCQ15814 346 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 MEI1Q5TIA1 1274 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 ATPAF2Q8N5M1 289 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 MADDQ8WXG6 1647 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 LZICQ8WZA0 190 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 NCLNQ969V3 563 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 EXTL3O43909 919 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 HADHAP40939 763 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 EIF3EP60228 445 aaKnown RBP17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 PDIA2Q13087 525 aaKnown RBP17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 ZC3H18Q86VM9 953 aaKnown RBP17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 ARHGAP18Q8N392 663 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 CAPN11Q9UMQ6 739 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 FAF1Q9UNN5 650 aaPredicted RBP17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 LRG1P02750 347 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 TMEM132BQ14DG7 1078 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 RCOR2Q8IZ40 523 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 SNF8Q96H20 258 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 POLR3CQ9BUI4 534 aaPredicted RBP17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 POLLQ9UGP5 575 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 AFF4Q9UHB7 1163 aaKnown RBP17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 TRIM33Q9UPN9 1127 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 SLC4A7Q9Y6M7 1214 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 TBC1D1Q86TI0 1168 aaPredicted RBP17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 ADSSL1Q8N142 457 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 SYT2Q8N9I0 419 aaPredicted RBP17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 PPHLN1Q8NEY8 458 aaKnown RBP17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 OSBPL9Q96SU4 736 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 NIF3L1Q9GZT8 377 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 PRG3Q9Y2Y8 225 aaPredicted RBP17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 CNTNAP5Q8WYK1 1306 aa17.13■□□□□ 0.33
PCDHA3-201ENST00000522353 P4HA2O15460 535 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 ARHGDIAP52565 204 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 PIGHQ14442 188 aaPredicted RBP17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 MORF4L2Q15014 288 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 CCDC137Q6PK04 289 aaKnown RBP17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 RASSF3Q86WH2 238 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 SENP7Q9BQF6 1050 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 AIPL1Q9NZN9 384 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 DOLKQ9UPQ8 538 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 L3MBTL1Q9Y468 752 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 DIP2AQ14689 1571 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 HMBSP08397 361 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 TYK2P29597 1187 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 RFX5P48382 616 aaPredicted RBP17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 HARS2P49590 506 aaKnown RBP17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 FXR2P51116 673 aaKnown RBP eCLIP17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 DEUP1Q05D60 604 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 ARHGEF7Q14155 803 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 TMEM8AQ9HCN3 771 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms