RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 NOMO2Q5JPE7 1267 aa26.19■■□□□ 1.78
PVT1-212ENST00000521951 EFCAB13Q8IY85 973 aa26.19■■□□□ 1.78
PVT1-212ENST00000521951 KIF12Q96FN5 646 aa26.19■■□□□ 1.78
PVT1-212ENST00000521951 CGRRF1Q99675 332 aa26.19■■□□□ 1.78
PVT1-212ENST00000521951 PLAGL2Q9UPG8 496 aa26.19■■□□□ 1.78
PVT1-212ENST00000521951 POMCP01189 267 aa26.18■■□□□ 1.78
PVT1-212ENST00000521951 NFICP08651 508 aa26.18■■□□□ 1.78
PVT1-212ENST00000521951 TRIM49P0CI25 452 aa26.18■■□□□ 1.78
PVT1-212ENST00000521951 TRIM49CP0CI26 452 aa26.18■■□□□ 1.78
PVT1-212ENST00000521951 ATP2A2P16615 1042 aaKnown RBP26.18■■□□□ 1.78
PVT1-212ENST00000521951 CDK11BP21127 795 aaKnown RBP26.18■■□□□ 1.78
PVT1-212ENST00000521951 BMP8BP34820 402 aa26.18■■□□□ 1.78
PVT1-212ENST00000521951 MTIF2P46199 727 aaKnown RBP26.18■■□□□ 1.78
PVT1-212ENST00000521951 LMBRD2Q68DH5 695 aaPredicted RBP26.18■■□□□ 1.78
PVT1-212ENST00000521951 USP37Q86T82 979 aa26.18■■□□□ 1.78
PVT1-212ENST00000521951 ZNF689Q96CS4 500 aaPredicted RBP26.18■■□□□ 1.78
PVT1-212ENST00000521951 DERAQ9Y315 318 aa26.18■■□□□ 1.78
PVT1-212ENST00000521951 PTPRJQ12913 1337 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 TBKBP1A7MCY6 615 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 GJB5O95377 273 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 THP07101 528 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 ATP1A3P13637 1013 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 TNNI1P19237 187 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 TPM4P67936 248 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 CLDN10P78369 228 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 TMEM132DQ14C87 1099 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 ZBTB6Q15916 424 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 DCAF17Q5H9S7 520 aaPredicted RBP26.17■■□□□ 1.78
PVT1-212ENST00000521951 TCERG1LQ5VWI1 586 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 WDR49Q8IV35 697 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 HERC6Q8IVU3 1022 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 URGCPQ8TCY9 931 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 ZNF516Q92618 1163 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 SLC35C1Q96A29 364 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 FAM84AQ96KN4 292 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 PPP1R10Q96QC0 940 aaKnown RBP26.17■■□□□ 1.78
PVT1-212ENST00000521951 TSPAN18Q96SJ8 248 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 C2CD2Q9Y426 696 aa26.17■■□□□ 1.78
PVT1-212ENST00000521951 COL4A6Q14031 1691 aa26.16■■□□□ 1.78
PVT1-212ENST00000521951 NT5DC4Q86YG4 428 aa26.16■■□□□ 1.78
PVT1-212ENST00000521951 OR5B17Q8NGF7 314 aa26.16■■□□□ 1.78
PVT1-212ENST00000521951 RC3H2Q9HBD1 1191 aaKnown RBP26.16■■□□□ 1.78
PVT1-212ENST00000521951 INTS13Q9NVM9 706 aa26.16■■□□□ 1.78
PVT1-212ENST00000521951 KANSL3Q9P2N6 904 aa26.16■■□□□ 1.78
PVT1-212ENST00000521951 TFAMQ00059 246 aaKnown RBP26.15■■□□□ 1.78
PVT1-212ENST00000521951 GRIK3Q13003 919 aa26.15■■□□□ 1.78
PVT1-212ENST00000521951 KRT31Q15323 416 aa26.15■■□□□ 1.78
PVT1-212ENST00000521951 NAB2Q15742 525 aa26.15■■□□□ 1.78
PVT1-212ENST00000521951 PAN2Q504Q3 1202 aaKnown RBP26.15■■□□□ 1.78
PVT1-212ENST00000521951 RSPH1Q8WYR4 309 aa26.15■■□□□ 1.78
PVT1-212ENST00000521951 C18orf25Q96B23 403 aaPredicted RBP26.15■■□□□ 1.78
PVT1-212ENST00000521951 TUBGCP2Q9BSJ2 902 aa26.15■■□□□ 1.78
PVT1-212ENST00000521951 ZBED2Q9BTP6 218 aa26.15■■□□□ 1.78
PVT1-212ENST00000521951 TBC1D13Q9NVG8 400 aa26.15■■□□□ 1.78
PVT1-212ENST00000521951 LIMA1Q9UHB6 759 aaKnown RBP26.15■■□□□ 1.78
PVT1-212ENST00000521951 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.15■■□□□ 1.78
PVT1-212ENST00000521951 HTRA4P83105 476 aaPredicted RBP26.14■■□□□ 1.78
PVT1-212ENST00000521951 PPP3CAQ08209 521 aa26.14■■□□□ 1.78
PVT1-212ENST00000521951 DUOXA2Q1HG44 320 aa26.14■■□□□ 1.78
PVT1-212ENST00000521951 CACTINQ8WUQ7 758 aaKnown RBP26.14■■□□□ 1.78
PVT1-212ENST00000521951 UBQLN1Q9UMX0 589 aaKnown RBP26.14■■□□□ 1.78
PVT1-212ENST00000521951 MAN2A1Q16706 1144 aa26.14■■□□□ 1.77
PVT1-212ENST00000521951 TMEM130Q8N3G9 435 aa26.14■■□□□ 1.77
PVT1-212ENST00000521951 YME1L1Q96TA2 773 aa26.14■■□□□ 1.77
PVT1-212ENST00000521951 SLC38A7Q9NVC3 462 aa26.14■■□□□ 1.77
PVT1-212ENST00000521951 TAB2Q9NYJ8 693 aa26.14■■□□□ 1.77
PVT1-212ENST00000521951 STX10O60499 249 aa26.13■■□□□ 1.77
PVT1-212ENST00000521951 TMEM191BP0C7N4 346 aa26.13■■□□□ 1.77
PVT1-212ENST00000521951 PRKCSHP14314 528 aaPredicted RBP26.13■■□□□ 1.77
PVT1-212ENST00000521951 GCLMP48507 274 aa26.13■■□□□ 1.77
PVT1-212ENST00000521951 AP3M2P53677 418 aa26.13■■□□□ 1.77
PVT1-212ENST00000521951 SOX4Q06945 474 aaPredicted RBP26.13■■□□□ 1.77
PVT1-212ENST00000521951 KCNH2Q12809 1159 aa26.13■■□□□ 1.77
PVT1-212ENST00000521951 ZNF280BQ86YH2 543 aa26.13■■□□□ 1.77
PVT1-212ENST00000521951 ANKRD20A12PQ8NF67 263 aa26.13■■□□□ 1.77
PVT1-212ENST00000521951 BEST2Q8NFU1 509 aa26.13■■□□□ 1.77
PVT1-212ENST00000521951 ANKRD36BP1Q96IX9 119 aa26.13■■□□□ 1.77
PVT1-212ENST00000521951 RAD9AQ99638 391 aa26.13■■□□□ 1.77
PVT1-212ENST00000521951 MRPL9Q9BYD2 267 aaKnown RBP26.13■■□□□ 1.77
PVT1-212ENST00000521951 MTMR12Q9C0I1 747 aa26.13■■□□□ 1.77
PVT1-212ENST00000521951 MMRN2Q9H8L6 949 aa26.13■■□□□ 1.77
PVT1-212ENST00000521951 TUBGCP4Q9UGJ1 667 aa26.13■■□□□ 1.77
PVT1-212ENST00000521951 INSL6Q9Y581 213 aa26.13■■□□□ 1.77
PVT1-212ENST00000521951 LRRC10BA6NIK2 292 aa26.12■■□□□ 1.77
PVT1-212ENST00000521951 XPOTO43592 962 aaKnown RBP26.12■■□□□ 1.77
PVT1-212ENST00000521951 DDHD2O94830 711 aa26.12■■□□□ 1.77
PVT1-212ENST00000521951 TNNC2P02585 160 aa26.12■■□□□ 1.77
PVT1-212ENST00000521951 C4BPAP04003 597 aaKnown RBP26.12■■□□□ 1.77
PVT1-212ENST00000521951 CYP3A5P20815 502 aa26.12■■□□□ 1.77
PVT1-212ENST00000521951 GTF2H1P32780 548 aa26.12■■□□□ 1.77
PVT1-212ENST00000521951 GUCY2FP51841 1108 aa26.12■■□□□ 1.77
PVT1-212ENST00000521951 RNASELQ05823 741 aaKnown RBP26.12■■□□□ 1.77
PVT1-212ENST00000521951 MIIPQ5JXC2 388 aa26.12■■□□□ 1.77
PVT1-212ENST00000521951 APTXQ7Z2E3 356 aaKnown RBP26.12■■□□□ 1.77
PVT1-212ENST00000521951 CMTR2Q8IYT2 770 aaKnown RBP26.12■■□□□ 1.77
PVT1-212ENST00000521951 DPP3Q9NY33 737 aa26.12■■□□□ 1.77
PVT1-212ENST00000521951 GRXCR1A8MXD5 290 aa26.11■■□□□ 1.77
PVT1-212ENST00000521951 B4GALT3O60512 393 aa26.11■■□□□ 1.77
PVT1-212ENST00000521951 AFPP02771 609 aaKnown RBP26.11■■□□□ 1.77
PVT1-212ENST00000521951 COPB1P53618 953 aaKnown RBP26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms