RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 FAM193BQ96PV7 902 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 DSCC1Q9BVC3 393 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 GCOM2Q9BZD3 368 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 ZNF334Q9HCZ1 680 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 KCNH3Q9ULD8 1083 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 CEP131Q9UPN4 1083 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 MSRB2Q9Y3D2 182 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 NEUROG3Q9Y4Z2 214 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 NCANO14594 1321 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 ABCA7Q8IZY2 2146 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 IGKV6-21A0A0C4DH24 114 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 IPO5O00410 1097 aaKnown RBP9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 CDX4O14627 284 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 STBD1O95210 358 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 POU2F2P09086 479 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 CEACAM1P13688 526 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 CCNE1P24864 410 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 MPLP40238 635 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 PXNP49023 591 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 ANTXR2P58335 489 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 UGCGQ16739 394 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 USP41Q3LFD5 358 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 PABPC1LQ4VXU2 614 aaKnown RBP9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 FAM78AQ5JUQ0 283 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 PPM1LQ5SGD2 360 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 FUT10Q6P4F1 479 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 CWC27Q6UX04 472 aaKnown RBP9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 NIPA1Q7RTP0 329 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 CRYGNQ8WXF5 182 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 BAP1Q92560 729 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 PGBD4Q96DM1 585 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 ZFP42Q96MM3 310 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 GAD1Q99259 594 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 MINDY3Q9H8M7 445 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 IFT122Q9HBG6 1241 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 TRPV5Q9NQA5 729 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 AGPAT5Q9NUQ2 364 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 GDE1Q9NZC3 331 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 CACNG4Q9UBN1 327 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 POLIQ9UNA4 740 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 PCDHA10Q9Y5I2 948 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 PIAS3Q9Y6X2 628 aa9.98□□□□□ -0.81
TRAPPC9-212ENST00000521944 TMEM150BA6NC51 233 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 ARL5CA6NH57 179 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 ADAMTS3O15072 1205 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 EXTL3O43909 919 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 CEBPBP17676 345 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 CSRP1P21291 193 aaKnown RBP9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 SFPQP23246 707 aaKnown RBP eCLIP9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 SREBF1P36956 1147 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 SH3BP2P78314 561 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 SKOR1P84550 965 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 ZNF746Q6NUN9 644 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 TXNDC11Q6PKC3 985 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 VITQ6UXI7 678 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 CACNA2D4Q7Z3S7 1137 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 EHBP1Q8NDI1 1231 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 LNX1Q8TBB1 728 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 SLC7A14Q8TBB6 771 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 GAB3Q8WWW8 586 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 ZC3H10Q96K80 434 aaKnown RBP9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 ZSWIM3Q96MP5 696 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 SH2D3AQ9BRG2 576 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 BRD9Q9H8M2 597 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 VPS45Q9NRW7 570 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 SEC63Q9UGP8 760 aaKnown RBP9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 PCDHGA5Q9Y5G8 931 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 EML5Q05BV3 1969 aa9.97□□□□□ -0.81
TRAPPC9-212ENST00000521944 ATG2BQ96BY7 2078 aa9.96□□□□□ -0.81
TRAPPC9-212ENST00000521944 LNP1A1A4G5 178 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 TTC24A2A3L6 582 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 FAM221BA6H8Z2 402 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 RHOP08100 348 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 SOX9P48436 509 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 SCNN1GP51170 649 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 MFAP1P55081 439 aaKnown RBP9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 PRKCEQ02156 737 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 LINC01559Q495D7 138 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 PRSS36Q5K4E3 855 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 AXDND1Q5T1B0 1012 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 PKN3Q6P5Z2 889 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 Q6ZNB5 142 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 CATSPER4Q7RTX7 472 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 CATIPQ7Z7H3 387 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 PLA2G4DQ86XP0 818 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 LURAP1LQ8IV03 231 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 SNIP1Q8TAD8 396 aaKnown RBP9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 LRRN4Q8WUT4 740 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 TCEAL4Q96EI5 215 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 MRGPRX2Q96LB1 330 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 MAP3K14Q99558 947 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 PAAF1Q9BRP4 392 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 EDEM2Q9BV94 578 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 TRMT61BQ9BVS5 477 aaKnown RBP9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 ANO3Q9BYT9 981 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 POLR3BQ9NW08 1133 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 ANKFY1Q9P2R3 1169 aa9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 MRPS23Q9Y3D9 190 aaKnown RBP9.96□□□□□ -0.82
TRAPPC9-212ENST00000521944 HES2Q9Y543 173 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms