RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	PSPN	O60542	156 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	SOAT2	O75908	522 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	USP1	O94782	785 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	SEC24D	O94855	1032 aa	Predicted RBP	4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	AMY1A	P04745	511 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	APEX1	P27695	318 aa	Known RBP	4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	PRDX5	P30044	214 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	TSPAN7	P41732	249 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	KIR2DL1	P43626	348 aa	Predicted RBP	4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	KIR2DL2	P43627	348 aa	Predicted RBP	4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	GPR15	P49685	360 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	NRG3	P56975	720 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	APBA1	Q02410	837 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	TLE1	Q04724	770 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	CTBP1	Q13363	440 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	IKZF1	Q13422	519 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	DLGAP5	Q15398	846 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	ALDH1L2	Q3SY69	923 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	SPECC1	Q5M775	1068 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	FBXO47	Q5MNV8	452 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	CNKSR3	Q6P9H4	555 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	BEND5	Q7L4P6	421 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	FASTKD5	Q7L8L6	764 aa	Known RBP	4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	FTSJ3	Q8IY81	847 aa	Known RBP	4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	OR1N1	Q8NGS0	311 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	OR6B3	Q8NGW1	331 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	STT3B	Q8TCJ2	826 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	DYDC2	Q96IM9	177 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	TRIM54	Q9BYV2	358 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	OR10A5	Q9H207	317 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	MRPL46	Q9H2W6	279 aa	Known RBP	4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	UNC45A	Q9H3U1	944 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	WASH6P	Q9NQA3	447 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	SMYD2	Q9NRG4	433 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	GALNT8	Q9NY28	637 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	KCMF1	Q9P0J7	381 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580		F8W031	263 aa	Predicted RBP	4.2	□□□□□ -1.74
SREK1-208	ENST00000520580		H0Y858	1186 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	N4BP3	O15049	544 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	CYP26A1	O43174	497 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	THAP12	O43422	761 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	ORC4	O43929	436 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	TBC1D4	O60343	1298 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	NRP2	O60462	931 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	ENDOD1	O94919	500 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	LRG1	P02750	347 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	ANXA2	P07355	339 aa	Known RBP	4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	FPR1	P21462	350 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	ADCY8	P40145	1251 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	PRKAA2	P54646	552 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	FOXO4	P98177	505 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	C1QTNF12	Q5T7M4	302 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	HAUS3	Q68CZ6	603 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	GALNT18	Q6P9A2	607 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	FAM180A	Q6UWF9	173 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	TMC5	Q6UXY8	1006 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	USP49	Q70CQ1	688 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	COLGALT2	Q8IYK4	626 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	PQLC1	Q8N2U9	271 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	TTC30B	Q8N4P2	665 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	REPS2	Q8NFH8	660 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	OR5AN1	Q8NGI8	311 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	SHKBP1	Q8TBC3	707 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	FAM71B	Q8TC56	605 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	NUP133	Q8WUM0	1156 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	AFG1L	Q8WV93	481 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	ASB11	Q8WXH4	323 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	SUCLG2	Q96I99	432 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	FAM167A	Q96KS9	214 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	KCNC2	Q96PR1	638 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	NELL2	Q99435	816 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	PRDM7	Q9NQW5	492 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	TLR9	Q9NR96	1032 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	DTL	Q9NZJ0	730 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	FEM1B	Q9UK73	627 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	TMEM265	A0A087WTH1	108 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	NT5C1B-RDH14	C9J2C7	533 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	F2RL2	O00254	374 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	HOXC11	O43248	304 aa	Predicted RBP	4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	LY86	O95711	162 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	HNRNPL	P14866	589 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	DDC	P20711	480 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	PCSK1	P29120	753 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	KRT20	P35900	424 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	GLRB	P48167	497 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	IL13RA1	P78552	427 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	CD83	Q01151	205 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	FOXO1	Q12778	655 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	NFIA	Q12857	509 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	CUL4B	Q13620	913 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	TIGD5	Q53EQ6	642 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	TEPP	Q6URK8	271 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	ZNF783	Q6ZMS7	281 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	MICU3	Q86XE3	530 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	TCP11L2	Q8N4U5	519 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms