RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 CFAP54Q96N23 3096 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 KRBA1A5PL33 1030 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 PROB1E7EW31 1015 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 ANHXE9PGG2 379 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 I3L4J1 428 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 TRAPPC3O43617 180 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 TKTP29401 623 aaKnown RBP16.64■□□□□ 0.25
CSMD1-207ENST00000520451 HOXA9P31269 272 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 MAPK7Q13164 816 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 RAB33AQ14088 237 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 RABEP1Q15276 862 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 UPP1Q16831 310 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 CD300LGQ6UXG3 332 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 C1orf186Q6ZWK4 172 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 TAS1R3Q7RTX0 852 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 CCDC105Q8IYK2 499 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 C3orf58Q8NDZ4 430 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 TCHPQ9BT92 498 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 PTPRHQ9HD43 1115 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 RBM19Q9Y4C8 960 aaKnown RBP16.64■□□□□ 0.25
CSMD1-207ENST00000520451 CDY1Q9Y6F8 540 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 ZFP37Q9Y6Q3 630 aaPredicted RBP16.64■□□□□ 0.25
CSMD1-207ENST00000520451 NUMBLQ9Y6R0 609 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 DMDP11532 3685 aa16.64■□□□□ 0.25
CSMD1-207ENST00000520451 VWA8A3KMH1 1905 aa16.63■□□□□ 0.25
CSMD1-207ENST00000520451 SFI1A8K8P3 1242 aa16.63■□□□□ 0.25
CSMD1-207ENST00000520451 SLC16A4O15374 487 aa16.63■□□□□ 0.25
CSMD1-207ENST00000520451 HARSP12081 509 aaKnown RBP16.63■□□□□ 0.25
CSMD1-207ENST00000520451 NBL1P41271 181 aa16.63■□□□□ 0.25
CSMD1-207ENST00000520451 BRCC3P46736 316 aa16.63■□□□□ 0.25
CSMD1-207ENST00000520451 ATP2C1P98194 919 aaPredicted RBP16.63■□□□□ 0.25
CSMD1-207ENST00000520451 SOX4Q06945 474 aaPredicted RBP16.63■□□□□ 0.25
CSMD1-207ENST00000520451 RAD51AP2Q09MP3 1159 aa16.63■□□□□ 0.25
CSMD1-207ENST00000520451 RILPL1Q5EBL4 403 aa16.63■□□□□ 0.25
CSMD1-207ENST00000520451 XKR4Q5GH76 650 aa16.63■□□□□ 0.25
CSMD1-207ENST00000520451 AXDND1Q5T1B0 1012 aaPredicted RBP16.63■□□□□ 0.25
CSMD1-207ENST00000520451 RSPO2Q6UXX9 243 aaPredicted RBP16.63■□□□□ 0.25
CSMD1-207ENST00000520451 DTWD2Q8NBA8 298 aa16.63■□□□□ 0.25
CSMD1-207ENST00000520451 GPR152Q8TDT2 470 aa16.63■□□□□ 0.25
CSMD1-207ENST00000520451 SNX27Q96L92 541 aa16.63■□□□□ 0.25
CSMD1-207ENST00000520451 TIPINQ9BVW5 301 aa16.63■□□□□ 0.25
CSMD1-207ENST00000520451 C17orf75Q9HAS0 396 aa16.63■□□□□ 0.25
CSMD1-207ENST00000520451 SLC38A7Q9NVC3 462 aa16.63■□□□□ 0.25
CSMD1-207ENST00000520451 CDH7Q9ULB5 785 aa16.63■□□□□ 0.25
CSMD1-207ENST00000520451 PODXLO00592 558 aa16.62■□□□□ 0.25
CSMD1-207ENST00000520451 MCF2P10911 925 aa16.62■□□□□ 0.25
CSMD1-207ENST00000520451 GUCY2CP25092 1073 aa16.62■□□□□ 0.25
CSMD1-207ENST00000520451 MPZL3Q6UWV2 235 aa16.62■□□□□ 0.25
CSMD1-207ENST00000520451 ALKAL1Q6UXT8 129 aa16.62■□□□□ 0.25
CSMD1-207ENST00000520451 ANKS3Q6ZW76 656 aa16.62■□□□□ 0.25
CSMD1-207ENST00000520451 FRMD5Q7Z6J6 570 aa16.62■□□□□ 0.25
CSMD1-207ENST00000520451 DDX27Q96GQ7 796 aaKnown RBP16.62■□□□□ 0.25
CSMD1-207ENST00000520451 ZMAT2Q96NC0 199 aaKnown RBP16.62■□□□□ 0.25
CSMD1-207ENST00000520451 ACAP3Q96P50 834 aa16.62■□□□□ 0.25
CSMD1-207ENST00000520451 TBC1D17Q9HA65 648 aa16.62■□□□□ 0.25
CSMD1-207ENST00000520451 ARHGEF3Q9NR81 526 aa16.62■□□□□ 0.25
CSMD1-207ENST00000520451 BACE2Q9Y5Z0 518 aa16.62■□□□□ 0.25
CSMD1-207ENST00000520451 ABLIM1O14639 778 aa16.61■□□□□ 0.25
CSMD1-207ENST00000520451 POU2F2P09086 479 aa16.61■□□□□ 0.25
CSMD1-207ENST00000520451 KCNE1P15382 129 aa16.61■□□□□ 0.25
CSMD1-207ENST00000520451 PROZP22891 400 aa16.61■□□□□ 0.25
CSMD1-207ENST00000520451 STRN3Q13033 797 aa16.61■□□□□ 0.25
CSMD1-207ENST00000520451 ANGPT1Q15389 498 aa16.61■□□□□ 0.25
CSMD1-207ENST00000520451 UVSSAQ2YD98 709 aa16.61■□□□□ 0.25
CSMD1-207ENST00000520451 PARM1Q6UWI2 310 aa16.61■□□□□ 0.25
CSMD1-207ENST00000520451 ASCL5Q7RTU5 278 aa16.61■□□□□ 0.25
CSMD1-207ENST00000520451 ITFG1Q8TB96 612 aa16.61■□□□□ 0.25
CSMD1-207ENST00000520451 FGF13Q92913 245 aa16.61■□□□□ 0.25
CSMD1-207ENST00000520451 FGF14Q92915 247 aa16.61■□□□□ 0.25
CSMD1-207ENST00000520451 PNMA5Q96PV4 448 aa16.61■□□□□ 0.25
CSMD1-207ENST00000520451 PLIN2Q99541 437 aa16.61■□□□□ 0.25
CSMD1-207ENST00000520451 RPP25Q9BUL9 199 aaKnown RBP16.61■□□□□ 0.25
CSMD1-207ENST00000520451 SLC2A4RGQ9NR83 387 aa16.61■□□□□ 0.25
CSMD1-207ENST00000520451 HCFC1R1Q9NWW0 138 aa16.61■□□□□ 0.25
CSMD1-207ENST00000520451 ANKFY1Q9P2R3 1169 aa16.61■□□□□ 0.25
CSMD1-207ENST00000520451 VWA3AA6NCI4 1184 aa16.6■□□□□ 0.25
CSMD1-207ENST00000520451 PRR23AA6NEV1 266 aa16.6■□□□□ 0.25
CSMD1-207ENST00000520451 H3BQV1 296 aa16.6■□□□□ 0.25
CSMD1-207ENST00000520451 PLS3P13797 630 aa16.6■□□□□ 0.25
CSMD1-207ENST00000520451 PABPC1LQ4VXU2 614 aaKnown RBP16.6■□□□□ 0.25
CSMD1-207ENST00000520451 VARS2Q5ST30 1063 aaKnown RBP16.6■□□□□ 0.25
CSMD1-207ENST00000520451 HYIQ5T013 277 aa16.6■□□□□ 0.25
CSMD1-207ENST00000520451 MTSS1LQ765P7 747 aa16.6■□□□□ 0.25
CSMD1-207ENST00000520451 TMEM161BQ8NDZ6 487 aa16.6■□□□□ 0.25
CSMD1-207ENST00000520451 SPIRE2Q8WWL2 714 aa16.6■□□□□ 0.25
CSMD1-207ENST00000520451 C18orf25Q96B23 403 aaPredicted RBP16.6■□□□□ 0.25
CSMD1-207ENST00000520451 CDK5RAP3Q96JB5 506 aa16.6■□□□□ 0.25
CSMD1-207ENST00000520451 TMX3Q96JJ7 454 aa16.6■□□□□ 0.25
CSMD1-207ENST00000520451 ZBTB45Q96K62 511 aaPredicted RBP16.6■□□□□ 0.25
CSMD1-207ENST00000520451 NTPCRQ9BSD7 190 aaKnown RBP16.6■□□□□ 0.25
CSMD1-207ENST00000520451 CNTN3Q9P232 1028 aa16.6■□□□□ 0.25
CSMD1-207ENST00000520451 DNMT3BQ9UBC3 853 aaKnown RBP16.6■□□□□ 0.25
CSMD1-207ENST00000520451 NUB1Q9Y5A7 615 aa16.6■□□□□ 0.25
CSMD1-207ENST00000520451 TRIP11Q15643 1979 aa16.6■□□□□ 0.25
CSMD1-207ENST00000520451 DOCK6Q96HP0 2047 aa16.6■□□□□ 0.25
CSMD1-207ENST00000520451 TOM1L1O75674 476 aa16.59■□□□□ 0.25
CSMD1-207ENST00000520451 CENPBP07199 599 aaPredicted RBP16.59■□□□□ 0.25
CSMD1-207ENST00000520451 PLA2G4BP0C869 781 aa16.59■□□□□ 0.25
CSMD1-207ENST00000520451 MAPTP10636 758 aaKnown RBP16.59■□□□□ 0.25
CSMD1-207ENST00000520451 GJB2P29033 226 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms