RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 SHHQ15465 462 aa19.28■□□□□ 0.68
SDC2-205ENST00000520233 ZBTB6Q15916 424 aa19.28■□□□□ 0.68
SDC2-205ENST00000520233 DCAF17Q5H9S7 520 aaPredicted RBP19.28■□□□□ 0.68
SDC2-205ENST00000520233 NOMO2Q5JPE7 1267 aa19.28■□□□□ 0.68
SDC2-205ENST00000520233 C1orf220Q5T0J3 134 aa19.28■□□□□ 0.68
SDC2-205ENST00000520233 TCERG1LQ5VWI1 586 aa19.28■□□□□ 0.68
SDC2-205ENST00000520233 SLC35C1Q96A29 364 aa19.28■□□□□ 0.68
SDC2-205ENST00000520233 KIF12Q96FN5 646 aa19.28■□□□□ 0.68
SDC2-205ENST00000520233 RNPC3Q96LT9 517 aaKnown RBP19.28■□□□□ 0.68
SDC2-205ENST00000520233 PPP1R10Q96QC0 940 aaKnown RBP19.28■□□□□ 0.68
SDC2-205ENST00000520233 POP1Q99575 1024 aaKnown RBP19.28■□□□□ 0.68
SDC2-205ENST00000520233 TUBGCP2Q9BSJ2 902 aa19.28■□□□□ 0.68
SDC2-205ENST00000520233 LIMA1Q9UHB6 759 aaKnown RBP19.28■□□□□ 0.68
SDC2-205ENST00000520233 INPP5FQ9Y2H2 1132 aa19.28■□□□□ 0.68
SDC2-205ENST00000520233 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.28■□□□□ 0.68
SDC2-205ENST00000520233 RALGAPA2Q2PPJ7 1873 aa19.27■□□□□ 0.68
SDC2-205ENST00000520233 LRRC10BA6NIK2 292 aa19.27■□□□□ 0.68
SDC2-205ENST00000520233 XPOTO43592 962 aaKnown RBP19.27■□□□□ 0.68
SDC2-205ENST00000520233 THP07101 528 aa19.27■□□□□ 0.68
SDC2-205ENST00000520233 TRIM49P0CI25 452 aa19.27■□□□□ 0.68
SDC2-205ENST00000520233 TRIM49CP0CI26 452 aa19.27■□□□□ 0.68
SDC2-205ENST00000520233 ATP1A3P13637 1013 aa19.27■□□□□ 0.68
SDC2-205ENST00000520233 ATP2A2P16615 1042 aaKnown RBP19.27■□□□□ 0.68
SDC2-205ENST00000520233 GTF2H1P32780 548 aa19.27■□□□□ 0.68
SDC2-205ENST00000520233 GATMP50440 423 aa19.27■□□□□ 0.68
SDC2-205ENST00000520233 AP3M2P53677 418 aa19.27■□□□□ 0.68
SDC2-205ENST00000520233 GRIK3Q13003 919 aa19.27■□□□□ 0.68
SDC2-205ENST00000520233 KRT31Q15323 416 aa19.27■□□□□ 0.68
SDC2-205ENST00000520233 MAN2A1Q16706 1144 aa19.27■□□□□ 0.68
SDC2-205ENST00000520233 GLRA4Q5JXX5 417 aa19.27■□□□□ 0.68
SDC2-205ENST00000520233 TMCO2Q7Z6W1 182 aaPredicted RBP19.27■□□□□ 0.68
SDC2-205ENST00000520233 EFCAB13Q8IY85 973 aa19.27■□□□□ 0.68
SDC2-205ENST00000520233 CACTINQ8WUQ7 758 aaKnown RBP19.27■□□□□ 0.68
SDC2-205ENST00000520233 ZNF516Q92618 1163 aa19.27■□□□□ 0.68
SDC2-205ENST00000520233 ZNF689Q96CS4 500 aaPredicted RBP19.27■□□□□ 0.68
SDC2-205ENST00000520233 MRPL9Q9BYD2 267 aaKnown RBP19.27■□□□□ 0.68
SDC2-205ENST00000520233 SLC38A7Q9NVC3 462 aa19.27■□□□□ 0.68
SDC2-205ENST00000520233 INTS13Q9NVM9 706 aa19.27■□□□□ 0.68
SDC2-205ENST00000520233 UBQLN1Q9UMX0 589 aaKnown RBP19.27■□□□□ 0.68
SDC2-205ENST00000520233 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.27■□□□□ 0.68
SDC2-205ENST00000520233 PTPRJQ12913 1337 aa19.26■□□□□ 0.67
SDC2-205ENST00000520233 TBKBP1A7MCY6 615 aa19.26■□□□□ 0.67
SDC2-205ENST00000520233 GJB5O95377 273 aa19.26■□□□□ 0.67
SDC2-205ENST00000520233 POMCP01189 267 aa19.26■□□□□ 0.67
SDC2-205ENST00000520233 TMEM191BP0C7N4 346 aa19.26■□□□□ 0.67
SDC2-205ENST00000520233 CYP3A5P20815 502 aa19.26■□□□□ 0.67
SDC2-205ENST00000520233 TFAMQ00059 246 aaKnown RBP19.26■□□□□ 0.67
SDC2-205ENST00000520233 KCNH2Q12809 1159 aa19.26■□□□□ 0.67
SDC2-205ENST00000520233 DUOXA2Q1HG44 320 aa19.26■□□□□ 0.67
SDC2-205ENST00000520233 LMBRD2Q68DH5 695 aaPredicted RBP19.26■□□□□ 0.67
SDC2-205ENST00000520233 FAM117BQ6P1L5 589 aa19.26■□□□□ 0.67
SDC2-205ENST00000520233 HERC6Q8IVU3 1022 aa19.26■□□□□ 0.67
SDC2-205ENST00000520233 BEST2Q8NFU1 509 aa19.26■□□□□ 0.67
SDC2-205ENST00000520233 ANKRD36BP1Q96IX9 119 aa19.26■□□□□ 0.67
SDC2-205ENST00000520233 RC3H2Q9HBD1 1191 aaKnown RBP19.26■□□□□ 0.67
SDC2-205ENST00000520233 PLAGL2Q9UPG8 496 aa19.26■□□□□ 0.67
SDC2-205ENST00000520233 TNNC2P02585 160 aa19.25■□□□□ 0.67
SDC2-205ENST00000520233 C4BPAP04003 597 aaKnown RBP19.25■□□□□ 0.67
SDC2-205ENST00000520233 TPM2P07951 284 aa19.25■□□□□ 0.67
SDC2-205ENST00000520233 PRKCSHP14314 528 aaPredicted RBP19.25■□□□□ 0.67
SDC2-205ENST00000520233 COPB1P53618 953 aaKnown RBP19.25■□□□□ 0.67
SDC2-205ENST00000520233 HTRA4P83105 476 aaPredicted RBP19.25■□□□□ 0.67
SDC2-205ENST00000520233 PPP3CAQ08209 521 aa19.25■□□□□ 0.67
SDC2-205ENST00000520233 NAB2Q15742 525 aa19.25■□□□□ 0.67
SDC2-205ENST00000520233 VWA3BQ502W6 1294 aa19.25■□□□□ 0.67
SDC2-205ENST00000520233 CMTR2Q8IYT2 770 aaKnown RBP19.25■□□□□ 0.67
SDC2-205ENST00000520233 OR5B17Q8NGF7 314 aa19.25■□□□□ 0.67
SDC2-205ENST00000520233 ZBED2Q9BTP6 218 aa19.25■□□□□ 0.67
SDC2-205ENST00000520233 TMEM8AQ9HCN3 771 aa19.25■□□□□ 0.67
SDC2-205ENST00000520233 TBC1D13Q9NVG8 400 aa19.25■□□□□ 0.67
SDC2-205ENST00000520233 TAB2Q9NYJ8 693 aa19.25■□□□□ 0.67
SDC2-205ENST00000520233 CITO14578 2027 aa19.25■□□□□ 0.67
SDC2-205ENST00000520233 ANK1P16157 1881 aa19.24■□□□□ 0.67
SDC2-205ENST00000520233 AFPP02771 609 aaKnown RBP19.24■□□□□ 0.67
SDC2-205ENST00000520233 GCLMP48507 274 aa19.24■□□□□ 0.67
SDC2-205ENST00000520233 FMO5P49326 533 aa19.24■□□□□ 0.67
SDC2-205ENST00000520233 UVSSAQ2YD98 709 aa19.24■□□□□ 0.67
SDC2-205ENST00000520233 MIIPQ5JXC2 388 aa19.24■□□□□ 0.67
SDC2-205ENST00000520233 KRT39Q6A163 491 aa19.24■□□□□ 0.67
SDC2-205ENST00000520233 C15orf39Q6ZRI6 1047 aa19.24■□□□□ 0.67
SDC2-205ENST00000520233 APTXQ7Z2E3 356 aaKnown RBP19.24■□□□□ 0.67
SDC2-205ENST00000520233 LRRC43Q8N309 656 aa19.24■□□□□ 0.67
SDC2-205ENST00000520233 C18orf25Q96B23 403 aaPredicted RBP19.24■□□□□ 0.67
SDC2-205ENST00000520233 YME1L1Q96TA2 773 aa19.24■□□□□ 0.67
SDC2-205ENST00000520233 MTMR12Q9C0I1 747 aa19.24■□□□□ 0.67
SDC2-205ENST00000520233 NDST4Q9H3R1 872 aa19.24■□□□□ 0.67
SDC2-205ENST00000520233 PMM2O15305 246 aa19.23■□□□□ 0.67
SDC2-205ENST00000520233 N4BP1O75113 896 aaKnown RBP19.23■□□□□ 0.67
SDC2-205ENST00000520233 MXI1P50539 228 aa19.23■□□□□ 0.67
SDC2-205ENST00000520233 FANCCQ00597 558 aa19.23■□□□□ 0.67
SDC2-205ENST00000520233 RNASELQ05823 741 aaKnown RBP19.23■□□□□ 0.67
SDC2-205ENST00000520233 SOX4Q06945 474 aaPredicted RBP19.23■□□□□ 0.67
SDC2-205ENST00000520233 DSC1Q08554 894 aa19.23■□□□□ 0.67
SDC2-205ENST00000520233 TUSC3Q13454 348 aa19.23■□□□□ 0.67
SDC2-205ENST00000520233 ZACNQ401N2 412 aa19.23■□□□□ 0.67
SDC2-205ENST00000520233 PAN2Q504Q3 1202 aaKnown RBP19.23■□□□□ 0.67
SDC2-205ENST00000520233 SV2AQ7L0J3 742 aa19.23■□□□□ 0.67
SDC2-205ENST00000520233 TRAPPC11Q7Z392 1133 aa19.23■□□□□ 0.67
SDC2-205ENST00000520233 RAD9AQ99638 391 aa19.23■□□□□ 0.67
SDC2-205ENST00000520233 VPS16Q9H269 839 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms