RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 GLYCTKQ8IVS8 523 aa23.24■■□□□ 1.31
ARFGEF1-206ENST00000519436 TDRD5Q8NAT2 981 aaKnown RBP23.24■■□□□ 1.31
ARFGEF1-206ENST00000519436 KREMEN2Q8NCW0 462 aa23.24■■□□□ 1.31
ARFGEF1-206ENST00000519436 WDR6Q9NNW5 1121 aaKnown RBP23.24■■□□□ 1.31
ARFGEF1-206ENST00000519436 LIMD1Q9UGP4 676 aa23.24■■□□□ 1.31
ARFGEF1-206ENST00000519436 MORC2Q9Y6X9 1032 aaPredicted RBP23.24■■□□□ 1.31
ARFGEF1-206ENST00000519436 H0YCG3 227 aa23.23■■□□□ 1.31
ARFGEF1-206ENST00000519436 PSMD5Q16401 504 aa23.23■■□□□ 1.31
ARFGEF1-206ENST00000519436 SEZ6Q53EL9 994 aa23.23■■□□□ 1.31
ARFGEF1-206ENST00000519436 CCDC149Q6ZUS6 474 aa23.23■■□□□ 1.31
ARFGEF1-206ENST00000519436 LARP4BQ92615 738 aaKnown RBP23.23■■□□□ 1.31
ARFGEF1-206ENST00000519436 SNX21Q969T3 373 aa23.23■■□□□ 1.31
ARFGEF1-206ENST00000519436 DDX27Q96GQ7 796 aaKnown RBP23.23■■□□□ 1.31
ARFGEF1-206ENST00000519436 MFSD14AQ96MC6 490 aa23.23■■□□□ 1.31
ARFGEF1-206ENST00000519436 PARVGQ9HBI0 331 aa23.23■■□□□ 1.31
ARFGEF1-206ENST00000519436 SLC38A7Q9NVC3 462 aa23.23■■□□□ 1.31
ARFGEF1-206ENST00000519436 TBX20Q9UMR3 447 aa23.23■■□□□ 1.31
ARFGEF1-206ENST00000519436 CLDN3O15551 220 aa23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 N4BP1O75113 896 aaKnown RBP23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 PIGRP01833 764 aa23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 ASGR2P07307 311 aa23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 PLA2G5P39877 138 aa23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 NOLC1Q14978 699 aaKnown RBP eCLIP23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 ELMSAN1Q6PJG2 1045 aa23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 RSPO2Q6UXX9 243 aaPredicted RBP23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 OTOP3Q7RTS5 596 aa23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 MYCT1Q8N699 235 aa23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 PBXIP1Q96AQ6 731 aa23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 CLIC6Q96NY7 704 aa23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 USP28Q96RU2 1077 aa23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 FOXD4L1Q9NU39 408 aa23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 ZDHHC7Q9NXF8 308 aa23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 ANKFY1Q9P2R3 1169 aa23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 FBXW11Q9UKB1 542 aa23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 SORCS3Q9UPU3 1222 aa23.22■■□□□ 1.31
ARFGEF1-206ENST00000519436 TRAK2O60296 914 aa23.21■■□□□ 1.31
ARFGEF1-206ENST00000519436 ZMYND10O75800 440 aa23.21■■□□□ 1.31
ARFGEF1-206ENST00000519436 FAM13AO94988 1023 aa23.21■■□□□ 1.31
ARFGEF1-206ENST00000519436 HARSP12081 509 aaKnown RBP23.21■■□□□ 1.31
ARFGEF1-206ENST00000519436 SCP2P22307 547 aa23.21■■□□□ 1.31
ARFGEF1-206ENST00000519436 BRCC3P46736 316 aa23.21■■□□□ 1.31
ARFGEF1-206ENST00000519436 RAB33AQ14088 237 aa23.21■■□□□ 1.31
ARFGEF1-206ENST00000519436 PDXDC1Q6P996 788 aa23.21■■□□□ 1.31
ARFGEF1-206ENST00000519436 C18orf25Q96B23 403 aaPredicted RBP23.21■■□□□ 1.31
ARFGEF1-206ENST00000519436 PRKD2Q9BZL6 878 aa23.21■■□□□ 1.31
ARFGEF1-206ENST00000519436 MTRRQ9UBK8 725 aa23.21■■□□□ 1.31
ARFGEF1-206ENST00000519436 PLXNA3P51805 1871 aa23.21■■□□□ 1.31
ARFGEF1-206ENST00000519436 MYO10Q9HD67 2058 aa23.21■■□□□ 1.31
ARFGEF1-206ENST00000519436 MUC6Q6W4X9 2439 aa23.2■■□□□ 1.3
ARFGEF1-206ENST00000519436 ZNF318Q5VUA4 2279 aa23.2■■□□□ 1.3
ARFGEF1-206ENST00000519436 I3L4J1 428 aa23.2■■□□□ 1.3
ARFGEF1-206ENST00000519436 STX6O43752 255 aa23.2■■□□□ 1.3
ARFGEF1-206ENST00000519436 FAM189A1O60320 539 aa23.2■■□□□ 1.3
ARFGEF1-206ENST00000519436 TKTP29401 623 aaKnown RBP23.2■■□□□ 1.3
ARFGEF1-206ENST00000519436 RPL9P32969 192 aaKnown RBP23.2■■□□□ 1.3
ARFGEF1-206ENST00000519436 GTF2BQ00403 316 aa23.2■■□□□ 1.3
ARFGEF1-206ENST00000519436 CEBPZQ03701 1054 aaKnown RBP23.2■■□□□ 1.3
ARFGEF1-206ENST00000519436 SLC39A14Q15043 492 aa23.2■■□□□ 1.3
ARFGEF1-206ENST00000519436 UBALD2Q8IYN6 164 aa23.2■■□□□ 1.3
ARFGEF1-206ENST00000519436 SMG7Q92540 1137 aaKnown RBP23.2■■□□□ 1.3
ARFGEF1-206ENST00000519436 ACSF2Q96CM8 615 aaPredicted RBP23.2■■□□□ 1.3
ARFGEF1-206ENST00000519436 SMOC2Q9H3U7 446 aa23.2■■□□□ 1.3
ARFGEF1-206ENST00000519436 ZSCAN16Q9H4T2 348 aaPredicted RBP23.2■■□□□ 1.3
ARFGEF1-206ENST00000519436 BACE2Q9Y5Z0 518 aa23.2■■□□□ 1.3
ARFGEF1-206ENST00000519436 ZDBF2Q9HCK1 2354 aa23.19■■□□□ 1.3
ARFGEF1-206ENST00000519436 TTC26A0AVF1 554 aa23.19■■□□□ 1.3
ARFGEF1-206ENST00000519436 PODXLO00592 558 aa23.19■■□□□ 1.3
ARFGEF1-206ENST00000519436 TRAPPC3O43617 180 aa23.19■■□□□ 1.3
ARFGEF1-206ENST00000519436 CLTAP09496 248 aa23.19■■□□□ 1.3
ARFGEF1-206ENST00000519436 ZBTB6Q15916 424 aa23.19■■□□□ 1.3
ARFGEF1-206ENST00000519436 SLC39A4Q6P5W5 647 aa23.19■■□□□ 1.3
ARFGEF1-206ENST00000519436 RASSF8Q8NHQ8 419 aa23.19■■□□□ 1.3
ARFGEF1-206ENST00000519436 FAM122AQ96E09 287 aa23.19■■□□□ 1.3
ARFGEF1-206ENST00000519436 PLEKHA5Q9HAU0 1116 aa23.19■■□□□ 1.3
ARFGEF1-206ENST00000519436 TRIP11Q15643 1979 aa23.19■■□□□ 1.3
ARFGEF1-206ENST00000519436 CLUHO75153 1309 aa23.18■■□□□ 1.3
ARFGEF1-206ENST00000519436 ADRB2P07550 413 aa23.18■■□□□ 1.3
ARFGEF1-206ENST00000519436 NMT1P30419 496 aaKnown RBP23.18■■□□□ 1.3
ARFGEF1-206ENST00000519436 OR1D2P34982 312 aa23.18■■□□□ 1.3
ARFGEF1-206ENST00000519436 MTMR3Q13615 1198 aa23.18■■□□□ 1.3
ARFGEF1-206ENST00000519436 FBXL6Q8N531 539 aa23.18■■□□□ 1.3
ARFGEF1-206ENST00000519436 KCNH6Q9H252 994 aa23.18■■□□□ 1.3
ARFGEF1-206ENST00000519436 ST6GALNAC4Q9H4F1 302 aa23.18■■□□□ 1.3
ARFGEF1-206ENST00000519436 STK17AQ9UEE5 414 aa23.18■■□□□ 1.3
ARFGEF1-206ENST00000519436 DENND4AQ7Z401 1863 aa23.17■■□□□ 1.3
ARFGEF1-206ENST00000519436 A0A0B4J269 797 aa23.17■■□□□ 1.3
ARFGEF1-206ENST00000519436 K7ENM7 598 aa23.17■■□□□ 1.3
ARFGEF1-206ENST00000519436 TBC1D4O60343 1298 aa23.17■■□□□ 1.3
ARFGEF1-206ENST00000519436 KRT18P05783 430 aaKnown RBP23.17■■□□□ 1.3
ARFGEF1-206ENST00000519436 CXCL8P10145 99 aa23.17■■□□□ 1.3
ARFGEF1-206ENST00000519436 TNFSF9P41273 254 aa23.17■■□□□ 1.3
ARFGEF1-206ENST00000519436 NASPP49321 788 aaPredicted RBP23.17■■□□□ 1.3
ARFGEF1-206ENST00000519436 LIG4P49917 911 aa23.17■■□□□ 1.3
ARFGEF1-206ENST00000519436 MRPL58Q14197 206 aaKnown RBP23.17■■□□□ 1.3
ARFGEF1-206ENST00000519436 ZBTB41Q5SVQ8 909 aa23.17■■□□□ 1.3
ARFGEF1-206ENST00000519436 TMEM130Q8N3G9 435 aa23.17■■□□□ 1.3
ARFGEF1-206ENST00000519436 BICD1Q96G01 975 aa23.17■■□□□ 1.3
ARFGEF1-206ENST00000519436 MYADMQ96S97 322 aa23.17■■□□□ 1.3
ARFGEF1-206ENST00000519436 EPS15L1Q9UBC2 864 aa23.17■■□□□ 1.3
ARFGEF1-206ENST00000519436 CCDC39Q9UFE4 941 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms