RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	CNTN6	Q9UQ52	1028 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	TRPC6	Q9Y210	931 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	GLTPD2	A6NH11	291 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	UNCX	A6NJT0	531 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	ASB14	A6NK59	587 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	TXN	P10599	105 aa	Known RBP	13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	CYP2C8	P10632	490 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	COMT	P21964	271 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	ECHS1	P30084	290 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	PEX5	P50542	639 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	BPIFB4	P59827	614 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	CUL2	Q13617	745 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	TTLL4	Q14679	1199 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	CLUL1	Q15846	466 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	WDR78	Q5VTH9	848 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	SPOPL	Q6IQ16	392 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	LRRC71	Q8N4P6	559 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	MREG	Q8N565	214 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	UBL4B	Q8N7F7	174 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	RNF149	Q8NC42	400 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	TSEN2	Q8NCE0	465 aa	Known RBP	13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	IFT81	Q8WYA0	676 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	SEC14L1	Q92503	715 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	KRT35	Q92764	455 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	NAP1L3	Q99457	506 aa	Predicted RBP	13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	ZSWIM1	Q9BR11	485 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	JPH2	Q9BR39	696 aa	Predicted RBP	13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	C2orf40	Q9H1Z8	148 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	SMARCAD1	Q9H4L7	1026 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	EFCC1	Q9HA90	598 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	PDGFC	Q9NRA1	345 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	PNMA3	Q9UL41	463 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	NR2E1	Q9Y466	385 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	SCN4A	P35499	1836 aa		13.27	□□□□□ -0.29
SPIDR-210	ENST00000519362	DCAF8L1	A6NGE4	600 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	RNF40	O75150	1001 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	CALCA	P01258	141 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	CYP1A1	P04798	512 aa	Predicted RBP	13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	FAM153B	P0C7A2	387 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	SRGAP2C	P0DJJ0	459 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	TNFSF9	P41273	254 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	AP3M2	P53677	418 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	PTEN	P60484	403 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	MCL1	Q07820	350 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	CUL1	Q13616	776 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	MESD	Q14696	234 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	MAPK6	Q16659	721 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	FAM153C	Q494X1	144 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	SEZ6	Q53EL9	994 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	EAPP	Q56P03	285 aa	Predicted RBP	13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	ALS2CL	Q60I27	953 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	WDR49	Q8IV35	697 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	ZBTB8OS	Q8IWT0	167 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	WHAMM	Q8TF30	809 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	RIN2	Q8WYP3	895 aa	Predicted RBP	13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	SH3GL2	Q99962	352 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	WNT8A	Q9H1J5	351 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	AMACR	Q9UHK6	382 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	FAM153A	Q9UHL3	310 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	MCM3AP	O60318	1980 aa		13.26	□□□□□ -0.29
SPIDR-210	ENST00000519362	HBP1	O60381	514 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	PHACTR2	O75167	634 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	PRKCB	P05771	671 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	CLTA	P09496	248 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	PROZ	P22891	400 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	CTNNA1	P35221	906 aa	Known RBP	13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	MARCKSL1	P49006	195 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	NOP14	P78316	857 aa	Known RBP	13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	CENPC	Q03188	943 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	ZNF211	Q13398	564 aa	Predicted RBP	13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	PPP2R5E	Q16537	467 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	ZNF792	Q3KQV3	632 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	ARMCX2	Q7L311	632 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	MAATS1	Q7Z4T9	603 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	MCOLN2	Q8IZK6	566 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	GPRC5A	Q8NFJ5	357 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	CCDC26	Q8TAB7	109 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	SLC10A4	Q96EP9	437 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	FZD8	Q9H461	694 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	PTPRH	Q9HD43	1115 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	AVEN	Q9NQS1	362 aa	Predicted RBP	13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	CNOT8	Q9UFF9	292 aa	Known RBP	13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	CPSF3	Q9UKF6	684 aa	Known RBP	13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	NUB1	Q9Y5A7	615 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	IQCA1L	A6NCM1	817 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	OGT	O15294	1046 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	HARS	P12081	509 aa	Known RBP	13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	TBXAS1	P24557	533 aa	Predicted RBP	13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	CTNNA2	P26232	953 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	ARHGAP1	Q07960	439 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	NCOA4	Q13772	614 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	TAPT1	Q6NXT6	567 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	TSHZ1	Q6ZSZ6	1077 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	RHPN2	Q8IUC4	686 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	UBR7	Q8N806	425 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	TRAPPC12	Q8WVT3	735 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	MS4A4A	Q96JQ5	239 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	BTBD6	Q96KE9	485 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms