RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 PPM1KQ8N3J5 372 aa13.37□□□□□ -0.27
SPIDR-209ENST00000519141 FAM84AQ96KN4 292 aa13.37□□□□□ -0.27
SPIDR-209ENST00000519141 C1orf112Q9NSG2 853 aa13.37□□□□□ -0.27
SPIDR-209ENST00000519141 RALGAPA2Q2PPJ7 1873 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 DNAH12Q6ZR08 3092 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 MOXD2PA6NHM9 499 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 PHACTR2O75167 634 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 OFD1O75665 1012 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 GFPT2O94808 682 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 CXCL8P10145 99 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 AXLP30530 894 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 PRKCIP41743 596 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 MFAP3P55082 362 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 ARHGAP29Q52LW3 1261 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 WDR44Q5JSH3 913 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 SLC27A1Q6PCB7 646 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 IRF2BP2Q7Z5L9 587 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 KIAA1328Q86T90 577 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 SERINC5Q86VE9 423 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 OR5B17Q8NGF7 314 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 FAM81BQ96LP2 452 aa13.36□□□□□ -0.27
SPIDR-209ENST00000519141 CELF4Q9BZC1 486 aaKnown RBP13.36□□□□□ -0.27
SPIDR-209ENST00000519141 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.36□□□□□ -0.272e-9■■■■■ 223.6
SPIDR-209ENST00000519141 REXO2Q9Y3B8 237 aaKnown RBP13.36□□□□□ -0.27
SPIDR-209ENST00000519141 B4GALT4O60513 344 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 NPTXRO95502 500 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 TNNC2P02585 160 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 TUBB4AP04350 444 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 TMEM191BP0C7N4 346 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 PNMA6AP0CW24 399 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-209ENST00000519141 ANXA13P27216 316 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 DUOXA2Q1HG44 320 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 ENOSF1Q7L5Y1 443 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 VPS36Q86VN1 386 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 TMEM192Q8IY95 271 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 TMEM40Q8WWA1 233 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 ANKRD36BP1Q96IX9 119 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 GLT1D1Q96MS3 346 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 TSEN34Q9BSV6 310 aaKnown RBP13.35□□□□□ -0.27
SPIDR-209ENST00000519141 IMPG2Q9BZV3 1241 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 MTMR12Q9C0I1 747 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 GPR88Q9GZN0 384 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 HAUS4Q9H6D7 363 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 LZTFL1Q9NQ48 299 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 TRPV2Q9Y5S1 764 aa13.35□□□□□ -0.27
SPIDR-209ENST00000519141 EVI5O60447 810 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 CLSTN1O94985 981 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 LCA5LO95447 670 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 VNN1O95497 513 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 HOXA11P31270 313 aaPredicted RBP13.34□□□□□ -0.27
SPIDR-209ENST00000519141 GRM5P41594 1212 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 TFAMQ00059 246 aaKnown RBP13.34□□□□□ -0.27
SPIDR-209ENST00000519141 CYP27A1Q02318 531 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 GCNT1Q02742 428 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 PTK2Q05397 1052 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 PTPN11Q06124 597 aaPredicted RBP13.34□□□□□ -0.27
SPIDR-209ENST00000519141 ITGA7Q13683 1181 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 NCOA4Q13772 614 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 PTGISQ16647 500 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 ASTE1Q2TB18 679 aaPredicted RBP13.34□□□□□ -0.27
SPIDR-209ENST00000519141 LHX8Q68G74 356 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 HELQQ8TDG4 1101 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 PI4K2AQ9BTU6 479 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.34□□□□□ -0.27
SPIDR-209ENST00000519141 CCDC94Q9BW85 323 aaPredicted RBP13.34□□□□□ -0.27
SPIDR-209ENST00000519141 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.34□□□□□ -0.27
SPIDR-209ENST00000519141 ASB7Q9H672 318 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 LUC7LQ9NQ29 371 aaKnown RBP13.34□□□□□ -0.27
SPIDR-209ENST00000519141 PIN4Q9Y237 131 aaKnown RBP13.34□□□□□ -0.27
SPIDR-209ENST00000519141 NOD1Q9Y239 953 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 CDY2AQ9Y6F7 541 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 GRIN2DO15399 1336 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 MROH7Q68CQ1 1323 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 CTSHP09668 335 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 VAV2P52735 878 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 GFPT1Q06210 699 aaPredicted RBP13.34□□□□□ -0.27
SPIDR-209ENST00000519141 SLC18A3Q16572 532 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 TRAPPC11Q7Z392 1133 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 RPAINQ86UA6 219 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 EFCAB13Q8IY85 973 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 TXLNBQ8N3L3 684 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 ARRDC4Q8NCT1 418 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 SHC3Q92529 594 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 KAT5Q92993 513 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 KREMEN1Q96MU8 473 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 ACAP3Q96P50 834 aa13.34□□□□□ -0.27
SPIDR-209ENST00000519141 IFIH1Q9BYX4 1025 aaKnown RBP13.34□□□□□ -0.27
SPIDR-209ENST00000519141 TRIM6Q9C030 488 aaPredicted RBP13.34□□□□□ -0.27
SPIDR-209ENST00000519141 LACTBL1A8MY62 500 aa13.33□□□□□ -0.28
SPIDR-209ENST00000519141 RBAK-RBAKDNI3L0D1 243 aa13.33□□□□□ -0.28
SPIDR-209ENST00000519141 FOXN3O00409 490 aaPredicted RBP13.33□□□□□ -0.28
SPIDR-209ENST00000519141 ZNF263O14978 683 aa13.33□□□□□ -0.28
SPIDR-209ENST00000519141 USP8P40818 1118 aa13.33□□□□□ -0.28
SPIDR-209ENST00000519141 ETF1P62495 437 aaKnown RBP13.33□□□□□ -0.28
SPIDR-209ENST00000519141 NOP14P78316 857 aaKnown RBP13.33□□□□□ -0.28
SPIDR-209ENST00000519141 TRPC3Q13507 836 aa13.33□□□□□ -0.28
SPIDR-209ENST00000519141 ZNF571Q7Z3V5 609 aaPredicted RBP13.33□□□□□ -0.28
SPIDR-209ENST00000519141 ZNF592Q92610 1267 aa13.33□□□□□ -0.28
SPIDR-209ENST00000519141 TATDN2Q93075 761 aa13.33□□□□□ -0.28
SPIDR-209ENST00000519141 WNT8BQ93098 351 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms