RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 TMEM130Q8N3G9 435 aa25.18■■□□□ 1.62
SLIT3-204ENST00000518140 U2AF1L4Q8WU68 220 aaKnown RBP25.18■■□□□ 1.62
SLIT3-204ENST00000518140 APOBEC3GQ9HC16 384 aaKnown RBP25.18■■□□□ 1.62
SLIT3-204ENST00000518140 MTMR12Q9C0I1 747 aa25.17■■□□□ 1.62
SLIT3-204ENST00000518140 SMIM35A0A1B0GVV1 85 aa25.17■■□□□ 1.62
SLIT3-204ENST00000518140 CXCL8P10145 99 aa25.17■■□□□ 1.62
SLIT3-204ENST00000518140 CCND3P30281 292 aaPredicted RBP25.17■■□□□ 1.62
SLIT3-204ENST00000518140 APLP1P51693 650 aa25.17■■□□□ 1.62
SLIT3-204ENST00000518140 GJA9P57773 515 aa25.17■■□□□ 1.62
SLIT3-204ENST00000518140 HTRA3P83110 453 aa25.17■■□□□ 1.62
SLIT3-204ENST00000518140 BMS1Q14692 1282 aaKnown RBP25.17■■□□□ 1.62
SLIT3-204ENST00000518140 ZNF410Q86VK4 478 aa25.17■■□□□ 1.62
SLIT3-204ENST00000518140 NAPGQ99747 312 aaPredicted RBP25.17■■□□□ 1.62
SLIT3-204ENST00000518140 BUB1O43683 1085 aa25.16■■□□□ 1.62
SLIT3-204ENST00000518140 CALCAP01258 141 aa25.16■■□□□ 1.62
SLIT3-204ENST00000518140 CXCL17Q6UXB2 119 aa25.16■■□□□ 1.62
SLIT3-204ENST00000518140 SLC47A2Q86VL8 602 aa25.16■■□□□ 1.62
SLIT3-204ENST00000518140 EFCAB13Q8IY85 973 aa25.16■■□□□ 1.62
SLIT3-204ENST00000518140 OSMRQ99650 979 aa25.16■■□□□ 1.62
SLIT3-204ENST00000518140 MRFAP1Q9Y605 127 aa25.16■■□□□ 1.62
SLIT3-204ENST00000518140 TRIP12Q14669 1992 aaPredicted RBP25.16■■□□□ 1.62
SLIT3-204ENST00000518140 STAG3L1P0CL83 205 aa25.16■■□□□ 1.62
SLIT3-204ENST00000518140 SRGAP1Q7Z6B7 1085 aa25.16■■□□□ 1.62
SLIT3-204ENST00000518140 WDR49Q8IV35 697 aa25.16■■□□□ 1.62
SLIT3-204ENST00000518140 CD99L2Q8TCZ2 262 aa25.16■■□□□ 1.62
SLIT3-204ENST00000518140 AGPAT1Q99943 283 aa25.16■■□□□ 1.62
SLIT3-204ENST00000518140 TAS2R14Q9NYV8 317 aa25.16■■□□□ 1.62
SLIT3-204ENST00000518140 UMODL1Q5DID0 1318 aa25.15■■□□□ 1.62
SLIT3-204ENST00000518140 TMCO5BA8MYB1 307 aa25.15■■□□□ 1.62
SLIT3-204ENST00000518140 ZC3H11AO75152 810 aaKnown RBP eCLIP25.15■■□□□ 1.62
SLIT3-204ENST00000518140 PHACTR2O75167 634 aa25.15■■□□□ 1.62
SLIT3-204ENST00000518140 ATP1A1P05023 1023 aaKnown RBP25.15■■□□□ 1.62
SLIT3-204ENST00000518140 CCDC172P0C7W6 258 aa25.15■■□□□ 1.62
SLIT3-204ENST00000518140 ANXA13P27216 316 aa25.15■■□□□ 1.62
SLIT3-204ENST00000518140 NCOA4Q13772 614 aa25.15■■□□□ 1.62
SLIT3-204ENST00000518140 WDR44Q5JSH3 913 aa25.15■■□□□ 1.62
SLIT3-204ENST00000518140 TRAPPC11Q7Z392 1133 aa25.15■■□□□ 1.62
SLIT3-204ENST00000518140 NOP9Q86U38 636 aaKnown RBP25.15■■□□□ 1.62
SLIT3-204ENST00000518140 VPS36Q86VN1 386 aa25.15■■□□□ 1.62
SLIT3-204ENST00000518140 VTI1AQ96AJ9 217 aa25.15■■□□□ 1.62
SLIT3-204ENST00000518140 NUB1Q9Y5A7 615 aa25.15■■□□□ 1.62
SLIT3-204ENST00000518140 A0A1B0GUA9 196 aa25.14■■□□□ 1.62
SLIT3-204ENST00000518140 SEPT4O43236 478 aa25.14■■□□□ 1.62
SLIT3-204ENST00000518140 CHRNB2P17787 502 aa25.14■■□□□ 1.62
SLIT3-204ENST00000518140 TNFAIP3P21580 790 aa25.14■■□□□ 1.62
SLIT3-204ENST00000518140 TFAMQ00059 246 aaKnown RBP25.14■■□□□ 1.62
SLIT3-204ENST00000518140 C1orf112Q9NSG2 853 aa25.14■■□□□ 1.62
SLIT3-204ENST00000518140 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.14■■□□□ 1.62
SLIT3-204ENST00000518140 V9GYY5 206 aaPredicted RBP25.14■■□□□ 1.62
SLIT3-204ENST00000518140 BRCA2P51587 3418 aa25.14■■□□□ 1.62
SLIT3-204ENST00000518140 C17orf102A2RUQ5 167 aa25.14■■□□□ 1.61
SLIT3-204ENST00000518140 ERLIN2O94905 339 aa25.14■■□□□ 1.61
SLIT3-204ENST00000518140 MCF2P10911 925 aa25.14■■□□□ 1.61
SLIT3-204ENST00000518140 HOXA11P31270 313 aaPredicted RBP25.14■■□□□ 1.61
SLIT3-204ENST00000518140 GCNT1Q02742 428 aa25.14■■□□□ 1.61
SLIT3-204ENST00000518140 C7orf31Q8N865 590 aa25.14■■□□□ 1.61
SLIT3-204ENST00000518140 CARD6Q9BX69 1037 aa25.14■■□□□ 1.61
SLIT3-204ENST00000518140 RPF1Q9H9Y2 349 aaKnown RBP25.14■■□□□ 1.61
SLIT3-204ENST00000518140 NOCTQ9UK39 431 aaKnown RBP25.14■■□□□ 1.61
SLIT3-204ENST00000518140 LACTBL1A8MY62 500 aa25.13■■□□□ 1.61
SLIT3-204ENST00000518140 DUOXA2Q1HG44 320 aa25.13■■□□□ 1.61
SLIT3-204ENST00000518140 TAF3Q5VWG9 929 aa25.13■■□□□ 1.61
SLIT3-204ENST00000518140 FMNL3Q8IVF7 1028 aa25.13■■□□□ 1.61
SLIT3-204ENST00000518140 EPS8L1Q8TE68 723 aa25.13■■□□□ 1.61
SLIT3-204ENST00000518140 TMEM40Q8WWA1 233 aa25.13■■□□□ 1.61
SLIT3-204ENST00000518140 KATNAL1Q9BW62 490 aa25.13■■□□□ 1.61
SLIT3-204ENST00000518140 GCOM2Q9BZD3 368 aaPredicted RBP25.13■■□□□ 1.61
SLIT3-204ENST00000518140 LUC7LQ9NQ29 371 aaKnown RBP25.13■■□□□ 1.61
SLIT3-204ENST00000518140 SEPT11Q9NVA2 429 aaKnown RBP25.13■■□□□ 1.61
SLIT3-204ENST00000518140 PRKAR2AP13861 404 aaKnown RBP25.13■■□□□ 1.61
SLIT3-204ENST00000518140 HOXC8P31273 242 aa25.13■■□□□ 1.61
SLIT3-204ENST00000518140 VEGFBP49765 207 aa25.13■■□□□ 1.61
SLIT3-204ENST00000518140 C10orf76Q5T2E6 689 aa25.13■■□□□ 1.61
SLIT3-204ENST00000518140 REM2Q8IYK8 340 aaPredicted RBP25.13■■□□□ 1.61
SLIT3-204ENST00000518140 RPUSD2Q8IZ73 545 aaKnown RBP25.13■■□□□ 1.61
SLIT3-204ENST00000518140 PCDHB18PQ96TA0 734 aa25.13■■□□□ 1.61
SLIT3-204ENST00000518140 UPF3AQ9H1J1 476 aaKnown RBP25.13■■□□□ 1.61
SLIT3-204ENST00000518140 B4GALT4O60513 344 aa25.12■■□□□ 1.61
SLIT3-204ENST00000518140 CLTAP09496 248 aa25.12■■□□□ 1.61
SLIT3-204ENST00000518140 RARBP10826 455 aa25.12■■□□□ 1.61
SLIT3-204ENST00000518140 MYL6P60660 151 aa25.12■■□□□ 1.61
SLIT3-204ENST00000518140 AMPD2Q01433 879 aa25.12■■□□□ 1.61
SLIT3-204ENST00000518140 ELF2Q15723 593 aa25.12■■□□□ 1.61
SLIT3-204ENST00000518140 ZNF784Q8NCA9 323 aaPredicted RBP25.12■■□□□ 1.61
SLIT3-204ENST00000518140 MYCNP04198 464 aaPredicted RBP25.11■■□□□ 1.61
SLIT3-204ENST00000518140 KRT5P13647 590 aa25.11■■□□□ 1.61
SLIT3-204ENST00000518140 DARSP14868 501 aaKnown RBP25.11■■□□□ 1.61
SLIT3-204ENST00000518140 GALCP54803 685 aa25.11■■□□□ 1.61
SLIT3-204ENST00000518140 NAP1L1P55209 391 aaKnown RBP25.11■■□□□ 1.61
SLIT3-204ENST00000518140 NBPF20Q3BBV1 942 aa25.11■■□□□ 1.61
SLIT3-204ENST00000518140 SLC10A6Q3KNW5 377 aa25.11■■□□□ 1.61
SLIT3-204ENST00000518140 MTG1Q9BT17 334 aaPredicted RBP25.11■■□□□ 1.61
SLIT3-204ENST00000518140 SRRDQ9UH36 339 aa25.11■■□□□ 1.61
SLIT3-204ENST00000518140 ADAMTS4O75173 837 aa25.11■■□□□ 1.61
SLIT3-204ENST00000518140 TACC1O75410 805 aa25.11■■□□□ 1.61
SLIT3-204ENST00000518140 NFICP08651 508 aa25.11■■□□□ 1.61
SLIT3-204ENST00000518140 NOP14P78316 857 aaKnown RBP25.11■■□□□ 1.61
SLIT3-204ENST00000518140 SURF1Q15526 300 aa25.11■■□□□ 1.61
SLIT3-204ENST00000518140 CATSPER4Q7RTX7 472 aa25.11■■□□□ 1.61
SLIT3-204ENST00000518140 CDC23Q9UJX2 597 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms