RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 C18orf25Q96B23 403 aaPredicted RBP11.56□□□□□ -0.56
SPIDR-205ENST00000518060 DDX27Q96GQ7 796 aaKnown RBP11.56□□□□□ -0.56
SPIDR-205ENST00000518060 EPSTI1Q96J88 318 aa11.56□□□□□ -0.56
SPIDR-205ENST00000518060 PLEKHA4Q9H4M7 779 aa11.56□□□□□ -0.56
SPIDR-205ENST00000518060 PTPRHQ9HD43 1115 aa11.56□□□□□ -0.56
SPIDR-205ENST00000518060 FNIP2Q9P278 1114 aa11.56□□□□□ -0.56
SPIDR-205ENST00000518060 POLIQ9UNA4 740 aa11.56□□□□□ -0.56
SPIDR-205ENST00000518060 SORCS3Q9UPU3 1222 aa11.56□□□□□ -0.56
SPIDR-205ENST00000518060 CLUHO75153 1309 aa11.56□□□□□ -0.56
SPIDR-205ENST00000518060 BRD1O95696 1058 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 CXCL8P10145 99 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 PROZP22891 400 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 TKTP29401 623 aaKnown RBP11.55□□□□□ -0.56
SPIDR-205ENST00000518060 MCM4P33991 863 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 NCKAP1LP55160 1127 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 ARPP19P56211 112 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 PPP2R3AQ06190 1150 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 SOX4Q06945 474 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-205ENST00000518060 SPAG1Q07617 926 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 UPP1Q16831 310 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 PPM1LQ5SGD2 360 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 RRAGBQ5VZM2 374 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 ZPBP2Q6X784 338 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 ZDHHC14Q8IZN3 488 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 KRI1Q8N9T8 703 aaKnown RBP11.55□□□□□ -0.56
SPIDR-205ENST00000518060 C3orf58Q8NDZ4 430 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 LNX1Q8TBB1 728 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-205ENST00000518060 LRRC15Q8TF66 581 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 FAM212AQ96EL1 285 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 KIF12Q96FN5 646 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 INTS4Q96HW7 963 aaKnown RBP11.55□□□□□ -0.56
SPIDR-205ENST00000518060 ZMAT2Q96NC0 199 aaKnown RBP11.55□□□□□ -0.56
SPIDR-205ENST00000518060 CLIC6Q96NY7 704 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 NTPCRQ9BSD7 190 aaKnown RBP11.55□□□□□ -0.56
SPIDR-205ENST00000518060 SMOC2Q9H3U7 446 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 BLOC1S4Q9NUP1 217 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 ZDHHC7Q9NXF8 308 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 DAXXQ9UER7 740 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-205ENST00000518060 FBXO2Q9UK22 296 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-205ENST00000518060 TBX20Q9UMR3 447 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 MTMR6Q9Y217 621 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 USTQ9Y2C2 406 aa11.55□□□□□ -0.56
SPIDR-205ENST00000518060 MUC6Q6W4X9 2439 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 TMEM189-UBE2V1I3L0A0 370 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 ABLIM1O14639 778 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 CCL16O15467 120 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 ADAM12O43184 909 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 STX6O43752 255 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 TRAK2O60296 914 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 ZMYND10O75800 440 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 C8AP07357 584 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 KCNE1P15382 129 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 IGFBP6P24592 240 aaPredicted RBP11.54□□□□□ -0.56
SPIDR-205ENST00000518060 NMT1P30419 496 aaKnown RBP11.54□□□□□ -0.56
SPIDR-205ENST00000518060 OR1D2P34982 312 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 MCL1Q07820 350 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 STK38Q15208 465 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 PTPAQ15257 358 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 USP49Q70CQ1 688 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 DYMQ7RTS9 669 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 GPR65Q8IYL9 337 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 UBALD2Q8IYN6 164 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 SLC7A14Q8TBB6 771 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 HDAC7Q8WUI4 952 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 ZNF707Q96C28 371 aaPredicted RBP11.54□□□□□ -0.56
SPIDR-205ENST00000518060 CLSTN3Q9BQT9 956 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 MSTO1Q9BUK6 570 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 PRKD2Q9BZL6 878 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 CCSER1Q9C0I3 900 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 MFSD1Q9H3U5 465 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 WDR6Q9NNW5 1121 aaKnown RBP11.54□□□□□ -0.56
SPIDR-205ENST00000518060 CNTN3Q9P232 1028 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 MTRRQ9UBK8 725 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 STK17AQ9UEE5 414 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 TUBGCP4Q9UGJ1 667 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 FBXW11Q9UKB1 542 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 CDY1Q9Y6F8 540 aa11.54□□□□□ -0.56
SPIDR-205ENST00000518060 XYLBO75191 536 aa11.53□□□□□ -0.56
SPIDR-205ENST00000518060 CLTAP09496 248 aa11.53□□□□□ -0.56
SPIDR-205ENST00000518060 FGFR3P22607 806 aa11.53□□□□□ -0.56
SPIDR-205ENST00000518060 RFX1P22670 979 aa11.53□□□□□ -0.56
SPIDR-205ENST00000518060 FSHRP23945 695 aa11.53□□□□□ -0.56
SPIDR-205ENST00000518060 DDIT3P35638 169 aa11.53□□□□□ -0.56
SPIDR-205ENST00000518060 TNFSF9P41273 254 aa11.53□□□□□ -0.56
SPIDR-205ENST00000518060 STAT6P42226 847 aa11.53□□□□□ -0.56
SPIDR-205ENST00000518060 SLC10A6Q3KNW5 377 aa11.53□□□□□ -0.56
SPIDR-205ENST00000518060 FOXD4L6Q3SYB3 417 aaPredicted RBP11.53□□□□□ -0.56
SPIDR-205ENST00000518060 VARS2Q5ST30 1063 aaKnown RBP11.53□□□□□ -0.56
SPIDR-205ENST00000518060 CYP26C1Q6V0L0 522 aa11.53□□□□□ -0.56
SPIDR-205ENST00000518060 FOXD4L3Q6VB84 417 aaPredicted RBP11.53□□□□□ -0.56
SPIDR-205ENST00000518060 ANKS3Q6ZW76 656 aa11.53□□□□□ -0.56
SPIDR-205ENST00000518060 SFR1Q86XK3 245 aa11.53□□□□□ -0.56
SPIDR-205ENST00000518060 FBXL6Q8N531 539 aa11.53□□□□□ -0.56
SPIDR-205ENST00000518060 USP28Q96RU2 1077 aa11.53□□□□□ -0.56
SPIDR-205ENST00000518060 PANK2Q9BZ23 570 aa11.53□□□□□ -0.56
SPIDR-205ENST00000518060 ZSCAN16Q9H4T2 348 aaPredicted RBP11.53□□□□□ -0.56
SPIDR-205ENST00000518060 RPF1Q9H9Y2 349 aaKnown RBP11.53□□□□□ -0.56
SPIDR-205ENST00000518060 FBXL21Q9UKT6 434 aa11.53□□□□□ -0.56
SPIDR-205ENST00000518060 SRPRBQ9Y5M8 271 aaKnown RBP11.53□□□□□ -0.56
SPIDR-205ENST00000518060 TECTAO75443 2155 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms