RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 VN1R2Q8NFZ6 395 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 ATP8B4Q8TF62 1192 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 TCEAL3Q969E4 200 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 MFSD3Q96ES6 412 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 SGSM3Q96HU1 749 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 MAML3Q96JK9 1138 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 EXOC2Q96KP1 924 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 MYD88Q99836 296 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 CORO1BQ9BR76 489 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 USP26Q9BXU7 913 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 NRSN2Q9GZP1 204 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 SIL1Q9H173 461 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 KCNK12Q9HB15 430 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 PRMT8Q9NR22 394 aaPredicted RBP4.03□□□□□ -1.76
CPNE3-204ENST00000517862 ARHGEF3Q9NR81 526 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 HOMER2Q9NSB8 354 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 TRMT13Q9NUP7 481 aaKnown RBP4.03□□□□□ -1.76
CPNE3-204ENST00000517862 POLKQ9UBT6 870 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 RABGAP1Q9Y3P9 1069 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 GOLGA4Q13439 2230 aaKnown RBP4.03□□□□□ -1.76
CPNE3-204ENST00000517862 SPEF2Q9C093 1822 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 FSCN2O14926 492 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 B4GALT3O60512 393 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 PDE8AO60658 829 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 DUSP11O75319 330 aaKnown RBP4.02□□□□□ -1.77
CPNE3-204ENST00000517862 MAP4K4O95819 1239 aaPredicted RBP4.02□□□□□ -1.77
CPNE3-204ENST00000517862 PGRP06401 933 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 CD68P34810 354 aaPredicted RBP4.02□□□□□ -1.77
CPNE3-204ENST00000517862 BMPR1AP36894 532 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 STAT3P40763 770 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 ARL4DP49703 201 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 NLRP12P59046 1061 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 CXADRP78310 365 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 RHDQ02161 417 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 ADCY1Q08828 1119 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 POU4F3Q15319 338 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 DUOXA2Q1HG44 320 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 PROSER3Q2NL68 480 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 SKOR2Q2VWA4 1001 aaPredicted RBP4.02□□□□□ -1.77
CPNE3-204ENST00000517862 LRRFIP1Q32MZ4 808 aaKnown RBP4.02□□□□□ -1.77
CPNE3-204ENST00000517862 UAP1L1Q3KQV9 507 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 GNPTABQ3T906 1256 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 BRDTQ58F21 947 aaPredicted RBP4.02□□□□□ -1.77
CPNE3-204ENST00000517862 FAM209AQ5JX71 171 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 AXDND1Q5T1B0 1012 aaPredicted RBP4.02□□□□□ -1.77
CPNE3-204ENST00000517862 ERICH6BQ5W0A0 696 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 XRRA1Q6P2D8 792 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 SYCE2Q6PIF2 218 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 HDXQ7Z353 690 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 PPFIBP1Q86W92 1011 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 ZSWIM9Q86XI8 627 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 CERS3Q8IU89 383 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 MYOCDQ8IZQ8 938 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 STK11IPQ8N1F8 1099 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.02□□□□□ -1.77
CPNE3-204ENST00000517862 FAM151AQ8WW52 585 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 NINJ1Q92982 152 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 ACSF2Q96CM8 615 aaPredicted RBP4.02□□□□□ -1.77
CPNE3-204ENST00000517862 FAM89AQ96GI7 184 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 DPH2Q9BQC3 489 aaPredicted RBP4.02□□□□□ -1.77
CPNE3-204ENST00000517862 SEZ6LQ9BYH1 1024 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 ALDH8A1Q9H2A2 487 aaPredicted RBP4.02□□□□□ -1.77
CPNE3-204ENST00000517862 CNNM2Q9H8M5 875 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 TMOD4Q9NZQ9 345 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 FAM184BQ9ULE4 1060 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 PLAAQ9Y263 795 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 FAN1Q9Y2M0 1017 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 FNDC1Q4ZHG4 1894 aaPredicted RBP4.02□□□□□ -1.77
CPNE3-204ENST00000517862 PTPRBP23467 1997 aa4.02□□□□□ -1.77
CPNE3-204ENST00000517862 KIF26AQ9ULI4 1882 aaPredicted RBP4.01□□□□□ -1.77
CPNE3-204ENST00000517862 A0A087X0B3 334 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 FSD2A1L4K1 749 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 TNFRSF10CO14798 259 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 DDX3YO15523 660 aaKnown RBP4.01□□□□□ -1.77
CPNE3-204ENST00000517862 STRNO43815 780 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 CTNND1O60716 968 aaKnown RBP4.01□□□□□ -1.77
CPNE3-204ENST00000517862 CNMDO75829 334 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 FAM155BO75949 473 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 CABYRO75952 493 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 AMHP03971 560 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 TP53P04637 393 aaPredicted RBP4.01□□□□□ -1.77
CPNE3-204ENST00000517862 HOXB8P17481 243 aaPredicted RBP4.01□□□□□ -1.77
CPNE3-204ENST00000517862 DCTP40126 519 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 EIF2S3P41091 472 aaKnown RBP4.01□□□□□ -1.77
CPNE3-204ENST00000517862 MAGEA9P43362 315 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 SLC7A5Q01650 507 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 PPP2R5DQ14738 602 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 UBXN2BQ14CS0 331 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 NCAPHQ15003 741 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 MTHFSDQ2M296 383 aaKnown RBP4.01□□□□□ -1.77
CPNE3-204ENST00000517862 SV2CQ496J9 727 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 CT47A1Q5JQC4 288 aaPredicted RBP4.01□□□□□ -1.77
CPNE3-204ENST00000517862 MFSD14BQ5SR56 506 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 CCDC181Q5TID7 509 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 CNNM4Q6P4Q7 775 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.01□□□□□ -1.77
CPNE3-204ENST00000517862 TAOK1Q7L7X3 1001 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 DDX42Q86XP3 938 aaKnown RBP eCLIP4.01□□□□□ -1.77
CPNE3-204ENST00000517862 TAB3Q8N5C8 712 aaPredicted RBP4.01□□□□□ -1.77
CPNE3-204ENST00000517862 KLHL23Q8NBE8 558 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms