RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CYP39A1Q9NYL5 469 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 FLRT1Q9NZU1 646 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 TPCN1Q9ULQ1 816 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 PHTF1Q9UMS5 762 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 LIMCH1Q9UPQ0 1083 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 MAPRE3Q9UPY8 281 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 CNPY2Q9Y2B0 182 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 CORINQ9Y5Q5 1042 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 LAMB1P07942 1786 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 PFASO15067 1338 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 E2F8A0AVK6 867 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 ASB14A6NK59 587 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 TTC36A6NLP5 189 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 UPK3BL1B0FP48 263 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 B4DLN1 442 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 UPK3BL2E5RIL1 263 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 GCOM1H8Y6P7 765 aaPredicted RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 LINC01387J3KSC0 135 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 PMM2O15305 246 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 ZNF862O60290 1169 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 DNAJA2O60884 412 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 DTNBO60941 627 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 CDKL5O76039 1030 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 POLR2MP0CAP2 368 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 FAM200BP0CF97 657 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 ACRP10323 421 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 TYRP1P17643 537 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 HOXA13P31271 388 aaPredicted RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 CCNFP41002 786 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 MRPL12P52815 198 aaKnown RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 RCAN1P53805 252 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 NAPAP54920 295 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 SOX10P56693 466 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 RPS6P62753 249 aaKnown RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 RABEP1Q15276 862 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 SAFBQ15424 915 aaKnown RBP eCLIP3.1□□□□□ -1.91
SKP1-204ENST00000517691 ZNF792Q3KQV3 632 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 SPECC1Q5M775 1068 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 ARHGEF16Q5VV41 709 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 OLFML2BQ68BL8 750 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 LRFN4Q6PJG9 635 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 SLC30A10Q6XR72 485 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 EEPD1Q7L9B9 569 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 LRRTM3Q86VH5 581 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 FBXL16Q8N461 479 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 KIAA1958Q8N8K9 716 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 C19orf47Q8N9M1 422 aaKnown RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 SMARCC2Q8TAQ2 1214 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 CLEC4DQ8WXI8 215 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 SLC7A3Q8WY07 619 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 PLPPR2Q96GM1 343 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 RMDN3Q96TC7 470 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 RETREG1Q9H6L5 497 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 PSTPIP2Q9H939 334 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 KMT5AQ9NQR1 393 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 ADD3Q9UEY8 706 aaKnown RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 ZHX1Q9UKY1 873 aaPredicted RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 DGKBQ9Y6T7 804 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 DDX49Q9Y6V7 483 aaKnown RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 PHIPQ8WWQ0 1821 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 ATAD5Q96QE3 1844 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 LOC285556D6RIA3 1793 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 A0A1W2PRQ8 180 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 SMCO2A6NFE2 343 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 SLC22A31A6NKX4 558 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 MEIS3P2A8K0S8 358 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 GPR39O43194 453 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 PFKFB2O60825 505 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 HTR3BO95264 441 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 HOXC6P09630 235 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 MYCLP12524 364 aaPredicted RBP3.09□□□□□ -1.91
SKP1-204ENST00000517691 SCG2P13521 617 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 IFNAR1P17181 557 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 MAOBP27338 520 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 CCND3P30281 292 aaPredicted RBP3.09□□□□□ -1.91
SKP1-204ENST00000517691 AFF1P51825 1210 aaKnown RBP3.09□□□□□ -1.91
SKP1-204ENST00000517691 ADCY7P51828 1080 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 EVCP57679 992 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 NLRP5P59047 1200 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 C19orf57Q0VDD7 668 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 SCRN1Q12765 414 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 BIRC3Q13489 604 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 MBTPS1Q14703 1052 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 STAT4Q14765 748 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 PCBP1Q15365 356 aaKnown RBP eCLIP3.09□□□□□ -1.91
SKP1-204ENST00000517691 GRIK4Q16099 956 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 UBE2SQ16763 222 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 ME3Q16798 604 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 ATP13A4Q4VNC1 1196 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 CCDC92Q53HC0 331 aaPredicted RBP3.09□□□□□ -1.91
SKP1-204ENST00000517691 WIPI1Q5MNZ9 446 aaPredicted RBP3.09□□□□□ -1.91
SKP1-204ENST00000517691 USP17L6PQ6QN14 398 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 NECAB2Q7Z6G3 386 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 SRLQ86TD4 932 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 RASSF3Q86WH2 238 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 CCDC83Q8IWF9 413 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 CNTD1Q8N815 330 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 SYTL5Q8TDW5 730 aaPredicted RBP3.09□□□□□ -1.91
SKP1-204ENST00000517691 NSUN6Q8TEA1 469 aaKnown RBP3.09□□□□□ -1.91
SKP1-204ENST00000517691 GJA10Q969M2 543 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms